RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 LMNB1P20700 586 aa8.46□□□□□ -1.06
SMARCE1P6-201ENST00000398372 HMGB2P26583 209 aaKnown RBP8.46□□□□□ -1.06
SMARCE1P6-201ENST00000398372 IL13P35225 146 aa8.46□□□□□ -1.06
SMARCE1P6-201ENST00000398372 MTHFSP49914 203 aa8.46□□□□□ -1.06
SMARCE1P6-201ENST00000398372 PLEKHO1Q53GL0 409 aaPredicted RBP8.46□□□□□ -1.06
SMARCE1P6-201ENST00000398372 SULT6B1Q6IMI4 303 aa8.46□□□□□ -1.06
SMARCE1P6-201ENST00000398372 CHADLQ6NUI6 762 aa8.46□□□□□ -1.06
SMARCE1P6-201ENST00000398372 AEBP1Q8IUX7 1158 aa8.46□□□□□ -1.06
SMARCE1P6-201ENST00000398372 AIDAQ96BJ3 306 aa8.46□□□□□ -1.06
SMARCE1P6-201ENST00000398372 ATG3Q9NT62 314 aa8.46□□□□□ -1.06
SMARCE1P6-201ENST00000398372 SRP68Q9UHB9 627 aaKnown RBP8.46□□□□□ -1.06
SMARCE1P6-201ENST00000398372 SSUH2Q9Y2M2 353 aa8.46□□□□□ -1.06
SMARCE1P6-201ENST00000398372 MYH14Q7Z406 1995 aaKnown RBP8.45□□□□□ -1.06
SMARCE1P6-201ENST00000398372 DEKP35659 375 aaKnown RBP8.45□□□□□ -1.06
SMARCE1P6-201ENST00000398372 PLSCR2Q9NRY7 297 aa8.45□□□□□ -1.06
SMARCE1P6-201ENST00000398372 TMOD3Q9NYL9 352 aa8.45□□□□□ -1.06
SMARCE1P6-201ENST00000398372 RTCBQ9Y3I0 505 aaKnown RBP8.45□□□□□ -1.06
SMARCE1P6-201ENST00000398372 RBM19Q9Y4C8 960 aaKnown RBP8.45□□□□□ -1.06
SMARCE1P6-201ENST00000398372 NFKBIEO00221 500 aa8.44□□□□□ -1.06
SMARCE1P6-201ENST00000398372 HSP90AB1P08238 724 aaKnown RBP8.44□□□□□ -1.06
SMARCE1P6-201ENST00000398372 RFC4P35249 363 aa8.44□□□□□ -1.06
SMARCE1P6-201ENST00000398372 AMOTQ4VCS5 1084 aa8.44□□□□□ -1.06
SMARCE1P6-201ENST00000398372 ZNF530Q6P9A1 599 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1P6-201ENST00000398372 PASKQ96RG2 1323 aa8.44□□□□□ -1.06
SMARCE1P6-201ENST00000398372 ZC3H4Q9UPT8 1303 aaKnown RBP8.44□□□□□ -1.06
SMARCE1P6-201ENST00000398372 NPC1L1Q9UHC9 1359 aa8.44□□□□□ -1.06
SMARCE1P6-201ENST00000398372 DIAPH1O60610 1272 aaKnown RBP8.43□□□□□ -1.06
SMARCE1P6-201ENST00000398372 RPS6KA4O75676 772 aa8.43□□□□□ -1.06
SMARCE1P6-201ENST00000398372 GABBR2O75899 941 aa8.43□□□□□ -1.06
SMARCE1P6-201ENST00000398372 ITGBL1O95965 494 aaPredicted RBP8.43□□□□□ -1.06
SMARCE1P6-201ENST00000398372 KDRP35968 1356 aa8.43□□□□□ -1.06
SMARCE1P6-201ENST00000398372 COL5A3P25940 1745 aaPredicted RBP8.43□□□□□ -1.06
SMARCE1P6-201ENST00000398372 ERVV-2B6SEH9 535 aa8.42□□□□□ -1.06
SMARCE1P6-201ENST00000398372 POLRMTO00411 1230 aaKnown RBP8.42□□□□□ -1.06
SMARCE1P6-201ENST00000398372 DDNO94850 711 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1P6-201ENST00000398372 HMOX1P09601 288 aa8.42□□□□□ -1.06
SMARCE1P6-201ENST00000398372 TM4SF1P30408 202 aa8.42□□□□□ -1.06
SMARCE1P6-201ENST00000398372 CABP4P57796 275 aa8.42□□□□□ -1.06
SMARCE1P6-201ENST00000398372 C1orf141Q5JVX7 400 aa8.42□□□□□ -1.06
SMARCE1P6-201ENST00000398372 SCN11AQ9UI33 1791 aa8.41□□□□□ -1.06
SMARCE1P6-201ENST00000398372 C19orf67A6NJJ6 358 aa8.41□□□□□ -1.06
SMARCE1P6-201ENST00000398372 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
SMARCE1P6-201ENST00000398372 CCDC184Q52MB2 194 aa8.41□□□□□ -1.06
SMARCE1P6-201ENST00000398372 RC3H1Q5TC82 1133 aaKnown RBP8.41□□□□□ -1.06
SMARCE1P6-201ENST00000398372 HOMEZQ8IX15 550 aa8.41□□□□□ -1.06
SMARCE1P6-201ENST00000398372 FAM9BQ8IZU0 186 aa8.41□□□□□ -1.06
SMARCE1P6-201ENST00000398372 PNISRQ8TF01 805 aaKnown RBP8.41□□□□□ -1.06
SMARCE1P6-201ENST00000398372 TSKSQ9UJT2 592 aa8.41□□□□□ -1.06
SMARCE1P6-201ENST00000398372 SALL2Q9Y467 1007 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1P6-201ENST00000398372 AFDNP55196 1824 aaKnown RBP8.4□□□□□ -1.06
SMARCE1P6-201ENST00000398372 ADAMTS7Q9UKP4 1686 aa8.4□□□□□ -1.06
SMARCE1P6-201ENST00000398372 CNTNAP4Q9C0A0 1308 aa8.4□□□□□ -1.06
SMARCE1P6-201ENST00000398372 WDR33Q9C0J8 1336 aaKnown RBP8.4□□□□□ -1.06
SMARCE1P6-201ENST00000398372 DEFB115Q30KQ5 88 aa8.4□□□□□ -1.06
SMARCE1P6-201ENST00000398372 DICER1Q9UPY3 1922 aaKnown RBP8.4□□□□□ -1.06
SMARCE1P6-201ENST00000398372 DLEC1Q9Y238 1755 aa8.4□□□□□ -1.07
SMARCE1P6-201ENST00000398372 COL3A1P02461 1466 aaPredicted RBP8.39□□□□□ -1.07
SMARCE1P6-201ENST00000398372 USP42Q9H9J4 1324 aaKnown RBP8.39□□□□□ -1.07
SMARCE1P6-201ENST00000398372 RIOK3O14730 519 aaKnown RBP8.39□□□□□ -1.07
SMARCE1P6-201ENST00000398372 U2SURPO15042 1029 aaKnown RBP8.39□□□□□ -1.07
SMARCE1P6-201ENST00000398372 AKAP4Q5JQC9 854 aa8.39□□□□□ -1.07
SMARCE1P6-201ENST00000398372 DPY19L2Q6NUT2 758 aa8.39□□□□□ -1.07
SMARCE1P6-201ENST00000398372 NFATC2IPQ8NCF5 419 aa8.39□□□□□ -1.07
SMARCE1P6-201ENST00000398372 LGR6Q9HBX8 967 aa8.39□□□□□ -1.07
SMARCE1P6-201ENST00000398372 ZNF831Q5JPB2 1677 aa8.39□□□□□ -1.07
SMARCE1P6-201ENST00000398372 RASSF10A6NK89 507 aa8.38□□□□□ -1.07
SMARCE1P6-201ENST00000398372 PRKAR2AP13861 404 aaKnown RBP8.38□□□□□ -1.07
SMARCE1P6-201ENST00000398372 CRKLP46109 303 aaKnown RBP8.38□□□□□ -1.07
SMARCE1P6-201ENST00000398372 FMR1Q06787 632 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMARCE1P6-201ENST00000398372 MTHFSDQ2M296 383 aaKnown RBP8.38□□□□□ -1.07
SMARCE1P6-201ENST00000398372 ERFEQ4G0M1 354 aa8.38□□□□□ -1.07
SMARCE1P6-201ENST00000398372 TTLL6Q8N841 843 aa8.38□□□□□ -1.07
SMARCE1P6-201ENST00000398372 MCOLN1Q9GZU1 580 aa8.38□□□□□ -1.07
SMARCE1P6-201ENST00000398372 TAF1DQ9H5J8 278 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1P6-201ENST00000398372 NUDCQ9Y266 331 aa8.38□□□□□ -1.07
SMARCE1P6-201ENST00000398372 RNF123Q5XPI4 1314 aa8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 FER1L6Q2WGJ9 1857 aa8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 RNMTO43148 476 aaKnown RBP8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 C21orf2O43822 256 aa8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 PTCD1O75127 700 aaKnown RBP8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 PPP2R1AP30153 589 aa8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 MAP2K1Q02750 393 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 USPL1Q5W0Q7 1092 aa8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 INTS5Q6P9B9 1019 aaKnown RBP8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 LDHDQ86WU2 507 aa8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 C2CD5Q86YS7 1000 aa8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 CFAP53Q96M91 514 aa8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 SLC52A2Q9HAB3 445 aa8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 CASP8AP2Q9UKL3 1982 aa8.37□□□□□ -1.07
SMARCE1P6-201ENST00000398372 CARMIL3Q8ND23 1372 aa8.36□□□□□ -1.07
SMARCE1P6-201ENST00000398372 ADAMTSL1Q8N6G6 1762 aa8.36□□□□□ -1.07
SMARCE1P6-201ENST00000398372 NFIXQ14938 502 aa8.36□□□□□ -1.07
SMARCE1P6-201ENST00000398372 NRXN2Q9P2S2 1712 aa8.36□□□□□ -1.07
SMARCE1P6-201ENST00000398372 LTBP1Q14766 1721 aa8.35□□□□□ -1.07
SMARCE1P6-201ENST00000398372 SLC39A6Q13433 755 aa8.35□□□□□ -1.07
SMARCE1P6-201ENST00000398372 EAPPQ56P03 285 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1P6-201ENST00000398372 MAP1SQ66K74 1059 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1P6-201ENST00000398372 GAS2L2Q8NHY3 880 aa8.35□□□□□ -1.07
SMARCE1P6-201ENST00000398372 RSPH6AQ9H0K4 717 aa8.35□□□□□ -1.07
SMARCE1P6-201ENST00000398372 PPP4R2Q9NY27 417 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms