RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 NECTIN2Q92692 538 aa24.32■■□□□ 1.48
COLCA2-201ENST00000398035 HYPKQ9NX55 129 aa24.32■■□□□ 1.48
COLCA2-201ENST00000398035 NIP7Q9Y221 180 aaKnown RBP eCLIP24.32■■□□□ 1.48
COLCA2-201ENST00000398035 SENP3-EIF4A1A0A087X0R7 540 aa24.31■■□□□ 1.48
COLCA2-201ENST00000398035 A0A0G2JLW4 131 aa24.31■■□□□ 1.48
COLCA2-201ENST00000398035 TTLL7Q6ZT98 887 aa24.31■■□□□ 1.48
COLCA2-201ENST00000398035 LRP10Q7Z4F1 713 aa24.31■■□□□ 1.48
COLCA2-201ENST00000398035 HLFQ16534 295 aa24.3■■□□□ 1.48
COLCA2-201ENST00000398035 COPS6Q7L5N1 327 aa24.3■■□□□ 1.48
COLCA2-201ENST00000398035 NBPF5PQ86XG9 351 aaPredicted RBP24.3■■□□□ 1.48
COLCA2-201ENST00000398035 BRIP1Q9BX63 1249 aa24.3■■□□□ 1.48
COLCA2-201ENST00000398035 PIM2Q9P1W9 311 aa24.3■■□□□ 1.48
COLCA2-201ENST00000398035 ELL2O00472 640 aaPredicted RBP24.29■■□□□ 1.48
COLCA2-201ENST00000398035 DPEP1P16444 411 aa24.29■■□□□ 1.48
COLCA2-201ENST00000398035 PDE6BP35913 854 aa24.29■■□□□ 1.48
COLCA2-201ENST00000398035 ST5P78524 1137 aa24.29■■□□□ 1.48
COLCA2-201ENST00000398035 CCDC30Q5VVM6 783 aa24.29■■□□□ 1.48
COLCA2-201ENST00000398035 GIGYF2Q6Y7W6 1299 aaKnown RBP24.29■■□□□ 1.48
COLCA2-201ENST00000398035 CNBD1Q8NA66 436 aa24.29■■□□□ 1.48
COLCA2-201ENST00000398035 C8orf58Q8NAV2 365 aa24.29■■□□□ 1.48
COLCA2-201ENST00000398035 MYH16Q9H6N6 1097 aa24.29■■□□□ 1.48
COLCA2-201ENST00000398035 CHPF2Q9P2E5 772 aa24.29■■□□□ 1.48
COLCA2-201ENST00000398035 PROSER3Q2NL68 480 aa24.28■■□□□ 1.48
COLCA2-201ENST00000398035 GOLGA2Q08379 1002 aa24.27■■□□□ 1.48
COLCA2-201ENST00000398035 HSP90AB3PQ58FF7 597 aa24.27■■□□□ 1.48
COLCA2-201ENST00000398035 PRR5LQ6MZQ0 368 aa24.27■■□□□ 1.48
COLCA2-201ENST00000398035 XAGE3Q8WTP9 111 aa24.27■■□□□ 1.48
COLCA2-201ENST00000398035 TSR2Q969E8 191 aaKnown RBP24.27■■□□□ 1.48
COLCA2-201ENST00000398035 ZBTB3Q9H5J0 574 aa24.27■■□□□ 1.48
COLCA2-201ENST00000398035 H0YIN7 160 aa24.27■■□□□ 1.48
COLCA2-201ENST00000398035 YBX3P16989 372 aaKnown RBP eCLIP24.27■■□□□ 1.48
COLCA2-201ENST00000398035 AIMP1Q12904 312 aaKnown RBP24.27■■□□□ 1.48
COLCA2-201ENST00000398035 NYXQ9GZU5 481 aa24.27■■□□□ 1.48
COLCA2-201ENST00000398035 ANXA1P04083 346 aa24.26■■□□□ 1.47
COLCA2-201ENST00000398035 KCNA3P22001 575 aa24.26■■□□□ 1.47
COLCA2-201ENST00000398035 GTF2E1P29083 439 aaPredicted RBP24.26■■□□□ 1.47
COLCA2-201ENST00000398035 PXDNLA1KZ92 1463 aa24.25■■□□□ 1.47
COLCA2-201ENST00000398035 PARP10Q53GL7 1025 aa24.25■■□□□ 1.47
COLCA2-201ENST00000398035 ANKRD13DQ6ZTN6 518 aa24.25■■□□□ 1.47
COLCA2-201ENST00000398035 TWISTNBQ3B726 338 aaPredicted RBP24.24■■□□□ 1.47
COLCA2-201ENST00000398035 DALRD3Q5D0E6 543 aaKnown RBP24.24■■□□□ 1.47
COLCA2-201ENST00000398035 ZNF34Q8IZ26 560 aa24.24■■□□□ 1.47
COLCA2-201ENST00000398035 LAMB4A4D0S4 1761 aa24.24■■□□□ 1.47
COLCA2-201ENST00000398035 PPP1R42Q7Z4L9 355 aa24.23■■□□□ 1.47
COLCA2-201ENST00000398035 MIER1Q8N108 512 aa24.23■■□□□ 1.47
COLCA2-201ENST00000398035 PLBD2Q8NHP8 589 aa24.23■■□□□ 1.47
COLCA2-201ENST00000398035 STK31Q9BXU1 1019 aa24.23■■□□□ 1.47
COLCA2-201ENST00000398035 BCS1LQ9Y276 419 aa24.23■■□□□ 1.47
COLCA2-201ENST00000398035 ATP10DQ9P241 1426 aa24.22■■□□□ 1.47
COLCA2-201ENST00000398035 CHRNA5P30532 468 aa24.22■■□□□ 1.47
COLCA2-201ENST00000398035 C2CD5Q86YS7 1000 aa24.22■■□□□ 1.47
COLCA2-201ENST00000398035 TSPYL6Q8N831 410 aa24.22■■□□□ 1.47
COLCA2-201ENST00000398035 FANCIQ9NVI1 1328 aa24.22■■□□□ 1.47
COLCA2-201ENST00000398035 YY1P25490 414 aa24.2■■□□□ 1.46
COLCA2-201ENST00000398035 TCIRG1Q13488 830 aa24.2■■□□□ 1.46
COLCA2-201ENST00000398035 ZNF521Q96K83 1311 aa24.2■■□□□ 1.46
COLCA2-201ENST00000398035 TTLL6Q8N841 843 aa24.19■■□□□ 1.46
COLCA2-201ENST00000398035 SCN7AQ01118 1682 aa24.19■■□□□ 1.46
COLCA2-201ENST00000398035 DDX58O95786 925 aaKnown RBP24.18■■□□□ 1.46
COLCA2-201ENST00000398035 GPTP24298 496 aa24.18■■□□□ 1.46
COLCA2-201ENST00000398035 WWC3Q9ULE0 1092 aa24.18■■□□□ 1.46
COLCA2-201ENST00000398035 IBTKQ9P2D0 1353 aaPredicted RBP24.18■■□□□ 1.46
COLCA2-201ENST00000398035 KLRG2A4D1S0 409 aaPredicted RBP24.18■■□□□ 1.46
COLCA2-201ENST00000398035 FAM177BA6PVY3 158 aa24.18■■□□□ 1.46
COLCA2-201ENST00000398035 RNF123Q5XPI4 1314 aa24.17■■□□□ 1.46
COLCA2-201ENST00000398035 E9PSI1 815 aa24.17■■□□□ 1.46
COLCA2-201ENST00000398035 EXOSC9Q06265 439 aaKnown RBP24.17■■□□□ 1.46
COLCA2-201ENST00000398035 SUSD4Q5VX71 490 aa24.17■■□□□ 1.46
COLCA2-201ENST00000398035 RIC3Q7Z5B4 369 aa24.17■■□□□ 1.46
COLCA2-201ENST00000398035 CCDC24Q8N4L8 307 aa24.17■■□□□ 1.46
COLCA2-201ENST00000398035 UTP14AQ9BVJ6 771 aaKnown RBP24.17■■□□□ 1.46
COLCA2-201ENST00000398035 SPINK5Q9NQ38 1064 aaPredicted RBP24.17■■□□□ 1.46
COLCA2-201ENST00000398035 VAMP4O75379 141 aa24.16■■□□□ 1.46
COLCA2-201ENST00000398035 STYK1Q6J9G0 422 aa24.16■■□□□ 1.46
COLCA2-201ENST00000398035 CNKSR1Q969H4 720 aa24.16■■□□□ 1.46
COLCA2-201ENST00000398035 ZNF622Q969S3 477 aaKnown RBP eCLIP24.16■■□□□ 1.46
COLCA2-201ENST00000398035 MASTLQ96GX5 879 aa24.16■■□□□ 1.46
COLCA2-201ENST00000398035 UBN2Q6ZU65 1347 aa24.15■■□□□ 1.46
COLCA2-201ENST00000398035 SLC4A2P04920 1241 aa24.15■■□□□ 1.46
COLCA2-201ENST00000398035 SRGNP10124 158 aa24.15■■□□□ 1.46
COLCA2-201ENST00000398035 PHAXQ9H814 394 aaKnown RBP24.15■■□□□ 1.46
COLCA2-201ENST00000398035 KIF13BQ9NQT8 1826 aa24.15■■□□□ 1.46
COLCA2-201ENST00000398035 TRIM28Q13263 835 aaKnown RBP24.14■■□□□ 1.45
COLCA2-201ENST00000398035 NRXN2Q9P2S2 1712 aa24.14■■□□□ 1.45
COLCA2-201ENST00000398035 NPR1P16066 1061 aa24.13■■□□□ 1.45
COLCA2-201ENST00000398035 ARHGAP27Q6ZUM4 889 aa24.13■■□□□ 1.45
COLCA2-201ENST00000398035 NLRP10Q86W26 655 aa24.13■■□□□ 1.45
COLCA2-201ENST00000398035 NTSR2O95665 410 aa24.12■■□□□ 1.45
COLCA2-201ENST00000398035 ALDH1B1P30837 517 aa24.12■■□□□ 1.45
COLCA2-201ENST00000398035 SLC10A5Q5PT55 438 aa24.12■■□□□ 1.45
COLCA2-201ENST00000398035 NUTM1Q86Y26 1132 aa24.12■■□□□ 1.45
COLCA2-201ENST00000398035 BCORQ6W2J9 1755 aa24.12■■□□□ 1.45
COLCA2-201ENST00000398035 ERFEQ4G0M1 354 aa24.11■■□□□ 1.45
COLCA2-201ENST00000398035 TRMT112Q9UI30 125 aaKnown RBP24.11■■□□□ 1.45
COLCA2-201ENST00000398035 KSR2Q6VAB6 950 aa24.1■■□□□ 1.45
COLCA2-201ENST00000398035 NLRP3Q96P20 1036 aa24.1■■□□□ 1.45
COLCA2-201ENST00000398035 ISCA1Q9BUE6 129 aa24.1■■□□□ 1.45
COLCA2-201ENST00000398035 SLFN5Q08AF3 891 aa24.1■■□□□ 1.45
COLCA2-201ENST00000398035 SOGA3Q5TF21 947 aa24.09■■□□□ 1.45
COLCA2-201ENST00000398035 HSP90B1P14625 803 aaKnown RBP24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms