RNA–Protein interactions for RNA: ENST00000397642.3

AL390728.1-201, humanhuman

BASIC

Gene AL390728.1, Length 1,941 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.1-201ENST00000397642 KIF6Q6ZMV9 814 aa13.83□□□□□ -0.2
AL390728.1-201ENST00000397642 LRP10Q7Z4F1 713 aa13.83□□□□□ -0.2
AL390728.1-201ENST00000397642 TSR2Q969E8 191 aaKnown RBP13.83□□□□□ -0.2
AL390728.1-201ENST00000397642 ERVV-1B6SEH8 477 aa13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 YBX3P16989 372 aaKnown RBP eCLIP13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 WDR63Q8IWG1 891 aa13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 C8orf58Q8NAV2 365 aa13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 DDX21Q9NR30 783 aaKnown RBP eCLIP13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 CARMIL3Q8ND23 1372 aa13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 IL16Q14005 1332 aa13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 MAP3K15Q6ZN16 1313 aa13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 RGL2O15211 777 aa13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 DPEP1P16444 411 aa13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 ZBTB3Q9H5J0 574 aa13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 CHPF2Q9P2E5 772 aa13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 NIP7Q9Y221 180 aaKnown RBP eCLIP13.82□□□□□ -0.2
AL390728.1-201ENST00000397642 NPHP1O15259 732 aa13.81□□□□□ -0.2
AL390728.1-201ENST00000397642 AIMP1Q12904 312 aaKnown RBP13.81□□□□□ -0.2
AL390728.1-201ENST00000397642 COPS6Q7L5N1 327 aa13.81□□□□□ -0.2
AL390728.1-201ENST00000397642 DBF4Q9UBU7 674 aaPredicted RBP13.81□□□□□ -0.2
AL390728.1-201ENST00000397642 SCN7AQ01118 1682 aa13.81□□□□□ -0.2
AL390728.1-201ENST00000397642 PXDNLA1KZ92 1463 aa13.8□□□□□ -0.2
AL390728.1-201ENST00000397642 MIER1Q8N108 512 aa13.8□□□□□ -0.2
AL390728.1-201ENST00000397642 CCDC24Q8N4L8 307 aa13.8□□□□□ -0.2
AL390728.1-201ENST00000397642 XAGE3Q8WTP9 111 aa13.8□□□□□ -0.2
AL390728.1-201ENST00000397642 KIF13BQ9NQT8 1826 aa13.8□□□□□ -0.2
AL390728.1-201ENST00000397642 GRIN3BO60391 1043 aa13.8□□□□□ -0.2
AL390728.1-201ENST00000397642 KCNA3P22001 575 aa13.8□□□□□ -0.2
AL390728.1-201ENST00000397642 CHRNA5P30532 468 aa13.8□□□□□ -0.2
AL390728.1-201ENST00000397642 PRR5LQ6MZQ0 368 aa13.8□□□□□ -0.2
AL390728.1-201ENST00000397642 NBPF5PQ86XG9 351 aaPredicted RBP13.8□□□□□ -0.2
AL390728.1-201ENST00000397642 TSPYL6Q8N831 410 aa13.8□□□□□ -0.2
AL390728.1-201ENST00000397642 CNBD1Q8NA66 436 aa13.8□□□□□ -0.2
AL390728.1-201ENST00000397642 AFDNP55196 1824 aaKnown RBP13.79□□□□□ -0.2
AL390728.1-201ENST00000397642 FAM177BA6PVY3 158 aa13.79□□□□□ -0.2
AL390728.1-201ENST00000397642 BCORQ6W2J9 1755 aa13.79□□□□□ -0.2
AL390728.1-201ENST00000397642 TPTE2Q6XPS3 522 aa13.78□□□□□ -0.2
AL390728.1-201ENST00000397642 GIGYF2Q6Y7W6 1299 aaKnown RBP13.78□□□□□ -0.2
AL390728.1-201ENST00000397642 HYPKQ9NX55 129 aa13.78□□□□□ -0.2
AL390728.1-201ENST00000397642 PIM2Q9P1W9 311 aa13.78□□□□□ -0.2
AL390728.1-201ENST00000397642 N4BP2Q86UW6 1770 aaPredicted RBP13.78□□□□□ -0.2
AL390728.1-201ENST00000397642 GPTP24298 496 aa13.78□□□□□ -0.2
AL390728.1-201ENST00000397642 BRIP1Q9BX63 1249 aa13.78□□□□□ -0.2
AL390728.1-201ENST00000397642 CHMP4AQ9BY43 222 aa13.78□□□□□ -0.2
AL390728.1-201ENST00000397642 SPINK5Q9NQ38 1064 aaPredicted RBP13.78□□□□□ -0.2
AL390728.1-201ENST00000397642 BCS1LQ9Y276 419 aa13.78□□□□□ -0.2
AL390728.1-201ENST00000397642 NRXN2Q9P2S2 1712 aa13.77□□□□□ -0.2
AL390728.1-201ENST00000397642 ST5P78524 1137 aa13.77□□□□□ -0.21
AL390728.1-201ENST00000397642 CCDC30Q5VVM6 783 aa13.77□□□□□ -0.21
AL390728.1-201ENST00000397642 FANCIQ9NVI1 1328 aa13.77□□□□□ -0.21
AL390728.1-201ENST00000397642 H0YIN7 160 aa13.76□□□□□ -0.21
AL390728.1-201ENST00000397642 GOLGA2Q08379 1002 aa13.76□□□□□ -0.21
AL390728.1-201ENST00000397642 TWISTNBQ3B726 338 aaPredicted RBP13.76□□□□□ -0.21
AL390728.1-201ENST00000397642 NUP98P52948 1817 aa13.76□□□□□ -0.21
AL390728.1-201ENST00000397642 YY1P25490 414 aa13.76□□□□□ -0.21
AL390728.1-201ENST00000397642 GTF2E1P29083 439 aaPredicted RBP13.76□□□□□ -0.21
AL390728.1-201ENST00000397642 PDE6BP35913 854 aa13.76□□□□□ -0.21
AL390728.1-201ENST00000397642 ANKRD13DQ6ZTN6 518 aa13.76□□□□□ -0.21
AL390728.1-201ENST00000397642 C2CD5Q86YS7 1000 aa13.76□□□□□ -0.21
AL390728.1-201ENST00000397642 ZNF34Q8IZ26 560 aa13.76□□□□□ -0.21
AL390728.1-201ENST00000397642 DALRD3Q5D0E6 543 aaKnown RBP13.75□□□□□ -0.21
AL390728.1-201ENST00000397642 MYH16Q9H6N6 1097 aa13.75□□□□□ -0.21
AL390728.1-201ENST00000397642 PHAXQ9H814 394 aaKnown RBP13.75□□□□□ -0.21
AL390728.1-201ENST00000397642 ATP10DQ9P241 1426 aa13.75□□□□□ -0.21
AL390728.1-201ENST00000397642 ZNF521Q96K83 1311 aa13.75□□□□□ -0.21
AL390728.1-201ENST00000397642 KIAA1551Q9HCM1 1747 aa13.75□□□□□ -0.21
AL390728.1-201ENST00000397642 PLBD2Q8NHP8 589 aa13.74□□□□□ -0.21
AL390728.1-201ENST00000397642 NYXQ9GZU5 481 aa13.74□□□□□ -0.21
AL390728.1-201ENST00000397642 UBN2Q6ZU65 1347 aa13.74□□□□□ -0.21
AL390728.1-201ENST00000397642 TCERG1O14776 1098 aaKnown RBP13.74□□□□□ -0.21
AL390728.1-201ENST00000397642 EXOSC9Q06265 439 aaKnown RBP13.74□□□□□ -0.21
AL390728.1-201ENST00000397642 HSP90AB3PQ58FF7 597 aa13.74□□□□□ -0.21
AL390728.1-201ENST00000397642 SUSD4Q5VX71 490 aa13.74□□□□□ -0.21
AL390728.1-201ENST00000397642 NUTM1Q86Y26 1132 aa13.74□□□□□ -0.21
AL390728.1-201ENST00000397642 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
AL390728.1-201ENST00000397642 TCIRG1Q13488 830 aa13.73□□□□□ -0.21
AL390728.1-201ENST00000397642 ZNF622Q969S3 477 aaKnown RBP eCLIP13.73□□□□□ -0.21
AL390728.1-201ENST00000397642 STK31Q9BXU1 1019 aa13.73□□□□□ -0.21
AL390728.1-201ENST00000397642 VAMP4O75379 141 aa13.72□□□□□ -0.21
AL390728.1-201ENST00000397642 PARP10Q53GL7 1025 aa13.72□□□□□ -0.21
AL390728.1-201ENST00000397642 PPP1R42Q7Z4L9 355 aa13.72□□□□□ -0.21
AL390728.1-201ENST00000397642 TTLL6Q8N841 843 aa13.72□□□□□ -0.21
AL390728.1-201ENST00000397642 SLC4A2P04920 1241 aa13.72□□□□□ -0.21
AL390728.1-201ENST00000397642 ERFEQ4G0M1 354 aa13.72□□□□□ -0.21
AL390728.1-201ENST00000397642 RIC3Q7Z5B4 369 aa13.72□□□□□ -0.21
AL390728.1-201ENST00000397642 CHD4Q14839 1912 aa13.71□□□□□ -0.21
AL390728.1-201ENST00000397642 SRGNP10124 158 aa13.71□□□□□ -0.21
AL390728.1-201ENST00000397642 ARHGAP27Q6ZUM4 889 aa13.71□□□□□ -0.21
AL390728.1-201ENST00000397642 UTP14AQ9BVJ6 771 aaKnown RBP13.71□□□□□ -0.21
AL390728.1-201ENST00000397642 BRCA1P38398 1863 aaKnown RBP13.71□□□□□ -0.22
AL390728.1-201ENST00000397642 ANKRD31Q8N7Z5 1873 aa13.71□□□□□ -0.22
AL390728.1-201ENST00000397642 KLRG2A4D1S0 409 aaPredicted RBP13.7□□□□□ -0.22
AL390728.1-201ENST00000397642 NTSR2O95665 410 aa13.7□□□□□ -0.22
AL390728.1-201ENST00000397642 NLRP10Q86W26 655 aa13.7□□□□□ -0.22
AL390728.1-201ENST00000397642 ATP5J2-PTCD1G3V325 749 aa13.7□□□□□ -0.22
AL390728.1-201ENST00000397642 ZNF428Q96B54 188 aa13.7□□□□□ -0.22
AL390728.1-201ENST00000397642 MASTLQ96GX5 879 aa13.7□□□□□ -0.22
AL390728.1-201ENST00000397642 YTHDC1Q96MU7 727 aaKnown RBP13.7□□□□□ -0.22
AL390728.1-201ENST00000397642 E9PSI1 815 aa13.69□□□□□ -0.22
AL390728.1-201ENST00000397642 DDX58O95786 925 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms