RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 DDX58O95786 925 aaKnown RBP18.82■□□□□ 0.6
CAPN3-207ENST00000397200 EIF5P55010 431 aaKnown RBP18.82■□□□□ 0.6
CAPN3-207ENST00000397200 NUP188Q5SRE5 1749 aa18.81■□□□□ 0.6
CAPN3-207ENST00000397200 RPS6KA4O75676 772 aa18.81■□□□□ 0.6
CAPN3-207ENST00000397200 TRIM27P14373 513 aa18.81■□□□□ 0.6
CAPN3-207ENST00000397200 UBR3Q6ZT12 1888 aa18.81■□□□□ 0.6
CAPN3-207ENST00000397200 DZIP1LQ8IYY4 767 aaKnown RBP18.81■□□□□ 0.6
CAPN3-207ENST00000397200 BACH2Q9BYV9 841 aa18.81■□□□□ 0.6
CAPN3-207ENST00000397200 RTCBQ9Y3I0 505 aaKnown RBP18.81■□□□□ 0.6
CAPN3-207ENST00000397200 COL15A1P39059 1388 aa18.8■□□□□ 0.6
CAPN3-207ENST00000397200 ARXQ96QS3 562 aa18.8■□□□□ 0.6
CAPN3-207ENST00000397200 A0A087WZG4 1122 aa18.79■□□□□ 0.6
CAPN3-207ENST00000397200 PDE4AP27815 886 aa18.79■□□□□ 0.6
CAPN3-207ENST00000397200 KIF6Q6ZMV9 814 aa18.79■□□□□ 0.6
CAPN3-207ENST00000397200 TTLL7Q6ZT98 887 aa18.79■□□□□ 0.6
CAPN3-207ENST00000397200 IGHDP01880 384 aa18.78■□□□□ 0.6
CAPN3-207ENST00000397200 ANKRD13DQ6ZTN6 518 aa18.78■□□□□ 0.6
CAPN3-207ENST00000397200 FTSJ3Q8IY81 847 aaKnown RBP18.78■□□□□ 0.6
CAPN3-207ENST00000397200 ARFGEF2Q9Y6D5 1785 aa18.78■□□□□ 0.6
CAPN3-207ENST00000397200 PI4KAP2A4QPH2 592 aa18.78■□□□□ 0.6
CAPN3-207ENST00000397200 ZNF827Q17R98 1081 aa18.78■□□□□ 0.6
CAPN3-207ENST00000397200 KSR2Q6VAB6 950 aa18.78■□□□□ 0.6
CAPN3-207ENST00000397200 RIC3Q7Z5B4 369 aa18.78■□□□□ 0.6
CAPN3-207ENST00000397200 DZIP3Q86Y13 1208 aaKnown RBP18.78■□□□□ 0.6
CAPN3-207ENST00000397200 PI4KAP1Q8N8J0 262 aa18.78■□□□□ 0.6
CAPN3-207ENST00000397200 AKT1S1Q96B36 256 aa18.78■□□□□ 0.6
CAPN3-207ENST00000397200 ADCY9O60503 1353 aa18.77■□□□□ 0.6
CAPN3-207ENST00000397200 F6X3S4 739 aa18.77■□□□□ 0.6
CAPN3-207ENST00000397200 PLBD2Q8NHP8 589 aa18.77■□□□□ 0.6
CAPN3-207ENST00000397200 TUBGCP6Q96RT7 1819 aa18.76■□□□□ 0.59
CAPN3-207ENST00000397200 MSH5O43196 834 aa18.76■□□□□ 0.59
CAPN3-207ENST00000397200 PHF14O94880 888 aa18.76■□□□□ 0.59
CAPN3-207ENST00000397200 ADRA2BP18089 450 aa18.76■□□□□ 0.59
CAPN3-207ENST00000397200 SKAP1Q86WV1 359 aa18.76■□□□□ 0.59
CAPN3-207ENST00000397200 DNAAF4Q8WXU2 420 aa18.76■□□□□ 0.59
CAPN3-207ENST00000397200 ZBTB3Q9H5J0 574 aa18.76■□□□□ 0.59
CAPN3-207ENST00000397200 TFCP2L1Q9NZI6 479 aa18.76■□□□□ 0.59
CAPN3-207ENST00000397200 TBC1D2BQ9UPU7 963 aa18.76■□□□□ 0.59
CAPN3-207ENST00000397200 MAP3K2Q9Y2U5 619 aa18.76■□□□□ 0.59
CAPN3-207ENST00000397200 C4AP0C0L4 1744 aa18.76■□□□□ 0.59
CAPN3-207ENST00000397200 ABCC4O15439 1325 aa18.75■□□□□ 0.59
CAPN3-207ENST00000397200 MAP3K15Q6ZN16 1313 aa18.75■□□□□ 0.59
CAPN3-207ENST00000397200 SSFA2P28290 1259 aa18.75■□□□□ 0.59
CAPN3-207ENST00000397200 TRAPPC3LQ5T215 181 aa18.75■□□□□ 0.59
CAPN3-207ENST00000397200 SLC4A10Q6U841 1118 aa18.75■□□□□ 0.59
CAPN3-207ENST00000397200 STK32BQ9NY57 414 aa18.75■□□□□ 0.59
CAPN3-207ENST00000397200 PCDHB15Q9Y5E8 787 aa18.75■□□□□ 0.59
CAPN3-207ENST00000397200 PXDNLA1KZ92 1463 aa18.75■□□□□ 0.59
CAPN3-207ENST00000397200 BCORQ6W2J9 1755 aa18.75■□□□□ 0.59
CAPN3-207ENST00000397200 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.74■□□□□ 0.59
CAPN3-207ENST00000397200 SMIM5Q71RC9 77 aa18.74■□□□□ 0.59
CAPN3-207ENST00000397200 AMIGO3Q86WK7 504 aa18.74■□□□□ 0.59
CAPN3-207ENST00000397200 DDX19BQ9UMR2 479 aa18.74■□□□□ 0.59
CAPN3-207ENST00000397200 N4BP2Q86UW6 1770 aaPredicted RBP18.74■□□□□ 0.59
CAPN3-207ENST00000397200 ARHGEF1Q92888 912 aaKnown RBP18.74■□□□□ 0.59
CAPN3-207ENST00000397200 ANO8Q9HCE9 1232 aaPredicted RBP18.74■□□□□ 0.59
CAPN3-207ENST00000397200 NUP98P52948 1817 aa18.74■□□□□ 0.59
CAPN3-207ENST00000397200 SCN7AQ01118 1682 aa18.73■□□□□ 0.59
CAPN3-207ENST00000397200 ERVV-1B6SEH8 477 aa18.73■□□□□ 0.59
CAPN3-207ENST00000397200 RFC4P35249 363 aa18.73■□□□□ 0.59
CAPN3-207ENST00000397200 SLC15A2Q16348 729 aa18.73■□□□□ 0.59
CAPN3-207ENST00000397200 QSER1Q2KHR3 1735 aa18.73■□□□□ 0.59
CAPN3-207ENST00000397200 ZPR1O75312 459 aa18.72■□□□□ 0.59
CAPN3-207ENST00000397200 NEXNQ0ZGT2 675 aa18.72■□□□□ 0.59
CAPN3-207ENST00000397200 TMEM57Q8N5G2 664 aa18.72■□□□□ 0.59
CAPN3-207ENST00000397200 FLAD1Q8NFF5 587 aa18.72■□□□□ 0.59
CAPN3-207ENST00000397200 METTL22Q9BUU2 404 aaPredicted RBP18.72■□□□□ 0.59
CAPN3-207ENST00000397200 CAMTA2O94983 1202 aa18.71■□□□□ 0.59
CAPN3-207ENST00000397200 NARFQ9UHQ1 456 aa18.71■□□□□ 0.59
CAPN3-207ENST00000397200 ANKRD36CQ5JPF3 1778 aa18.71■□□□□ 0.59
CAPN3-207ENST00000397200 ATP10DQ9P241 1426 aa18.71■□□□□ 0.59
CAPN3-207ENST00000397200 AFDNP55196 1824 aaKnown RBP18.71■□□□□ 0.59
CAPN3-207ENST00000397200 CCT4P50991 539 aaKnown RBP18.71■□□□□ 0.58
CAPN3-207ENST00000397200 GIGYF2Q6Y7W6 1299 aaKnown RBP18.71■□□□□ 0.58
CAPN3-207ENST00000397200 MYD88Q99836 296 aa18.71■□□□□ 0.58
CAPN3-207ENST00000397200 ZNF652Q9Y2D9 606 aa18.71■□□□□ 0.58
CAPN3-207ENST00000397200 HLFQ16534 295 aa18.7■□□□□ 0.58
CAPN3-207ENST00000397200 HSP90AB3PQ58FF7 597 aa18.7■□□□□ 0.58
CAPN3-207ENST00000397200 INTS3Q68E01 1043 aaKnown RBP18.7■□□□□ 0.58
CAPN3-207ENST00000397200 ITPRIPQ8IWB1 547 aa18.7■□□□□ 0.58
CAPN3-207ENST00000397200 SRCIN1Q9C0H9 1055 aa18.7■□□□□ 0.58
CAPN3-207ENST00000397200 SRP68Q9UHB9 627 aaKnown RBP18.7■□□□□ 0.58
CAPN3-207ENST00000397200 USP42Q9H9J4 1324 aaKnown RBP18.69■□□□□ 0.58
CAPN3-207ENST00000397200 BEND3Q5T5X7 828 aa18.69■□□□□ 0.58
CAPN3-207ENST00000397200 USPL1Q5W0Q7 1092 aa18.69■□□□□ 0.58
CAPN3-207ENST00000397200 PNPLA7Q6ZV29 1317 aa18.69■□□□□ 0.58
CAPN3-207ENST00000397200 RGL2O15211 777 aa18.68■□□□□ 0.58
CAPN3-207ENST00000397200 TCIRG1Q13488 830 aa18.68■□□□□ 0.58
CAPN3-207ENST00000397200 HDAC1Q13547 482 aaPredicted RBP18.68■□□□□ 0.58
CAPN3-207ENST00000397200 CLEC4GQ6UXB4 293 aa18.68■□□□□ 0.58
CAPN3-207ENST00000397200 LINS1Q8NG48 757 aa18.68■□□□□ 0.58
CAPN3-207ENST00000397200 RWDD1Q9H446 243 aaPredicted RBP18.68■□□□□ 0.58
CAPN3-207ENST00000397200 ZBTB40Q9NUA8 1239 aa18.68■□□□□ 0.58
CAPN3-207ENST00000397200 ALDH1L1O75891 902 aa18.67■□□□□ 0.58
CAPN3-207ENST00000397200 ANP32AP39687 249 aaKnown RBP18.67■□□□□ 0.58
CAPN3-207ENST00000397200 FAM161AQ3B820 660 aa18.67■□□□□ 0.58
CAPN3-207ENST00000397200 COL23A1Q86Y22 540 aaPredicted RBP18.67■□□□□ 0.58
CAPN3-207ENST00000397200 ATP5J2-PTCD1G3V325 749 aa18.67■□□□□ 0.58
CAPN3-207ENST00000397200 IGKV5-2P06315 115 aa18.67■□□□□ 0.58
CAPN3-207ENST00000397200 CWF19L2Q2TBE0 894 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms