RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 SCN7AQ01118 1682 aa37.85■■■■□ 3.65
CHCHD4-202ENST00000396914 TCERG1O14776 1098 aaKnown RBP37.84■■■■□ 3.65
CHCHD4-202ENST00000396914 COPS6Q7L5N1 327 aa37.83■■■■□ 3.65
CHCHD4-202ENST00000396914 XAGE3Q8WTP9 111 aa37.83■■■■□ 3.65
CHCHD4-202ENST00000396914 STK31Q9BXU1 1019 aa37.83■■■■□ 3.65
CHCHD4-202ENST00000396914 HYPKQ9NX55 129 aa37.83■■■■□ 3.65
CHCHD4-202ENST00000396914 ZBTB3Q9H5J0 574 aa37.82■■■■□ 3.64
CHCHD4-202ENST00000396914 MAP3K15Q6ZN16 1313 aa37.81■■■■□ 3.64
CHCHD4-202ENST00000396914 BCORQ6W2J9 1755 aa37.8■■■■□ 3.64
CHCHD4-202ENST00000396914 NFIXQ14938 502 aa37.8■■■■□ 3.64
CHCHD4-202ENST00000396914 TBC1D9BQ66K14 1250 aa37.8■■■■□ 3.64
CHCHD4-202ENST00000396914 LRP10Q7Z4F1 713 aa37.8■■■■□ 3.64
CHCHD4-202ENST00000396914 VAMP4O75379 141 aa37.78■■■■□ 3.64
CHCHD4-202ENST00000396914 TM4SF1P30408 202 aa37.78■■■■□ 3.64
CHCHD4-202ENST00000396914 FHDC1Q9C0D6 1143 aaPredicted RBP37.78■■■■□ 3.64
CHCHD4-202ENST00000396914 HLFQ16534 295 aa37.78■■■■□ 3.64
CHCHD4-202ENST00000396914 CLEC4GQ6UXB4 293 aa37.78■■■■□ 3.64
CHCHD4-202ENST00000396914 ERVV-1B6SEH8 477 aa37.77■■■■□ 3.64
CHCHD4-202ENST00000396914 DDR1Q08345 913 aa37.77■■■■□ 3.64
CHCHD4-202ENST00000396914 SETDB2Q96T68 719 aa37.77■■■■□ 3.64
CHCHD4-202ENST00000396914 POLRMTO00411 1230 aaKnown RBP37.74■■■■□ 3.63
CHCHD4-202ENST00000396914 PHAXQ9H814 394 aaKnown RBP37.74■■■■□ 3.63
CHCHD4-202ENST00000396914 NPHP1O15259 732 aa37.72■■■■□ 3.63
CHCHD4-202ENST00000396914 SLC4A2P04920 1241 aa37.72■■■■□ 3.63
CHCHD4-202ENST00000396914 NIP7Q9Y221 180 aaKnown RBP eCLIP37.72■■■■□ 3.63
CHCHD4-202ENST00000396914 SERPINB2P05120 415 aa37.71■■■■□ 3.63
CHCHD4-202ENST00000396914 ZBED9Q6R2W3 1325 aa37.71■■■■□ 3.63
CHCHD4-202ENST00000396914 RGL2O15211 777 aa37.7■■■■□ 3.63
CHCHD4-202ENST00000396914 TRMT2AQ8IZ69 625 aaKnown RBP37.7■■■■□ 3.63
CHCHD4-202ENST00000396914 CARMIL3Q8ND23 1372 aa37.7■■■■□ 3.63
CHCHD4-202ENST00000396914 ANKRD13DQ6ZTN6 518 aa37.7■■■■□ 3.62
CHCHD4-202ENST00000396914 GIGYF2Q6Y7W6 1299 aaKnown RBP37.69■■■■□ 3.62
CHCHD4-202ENST00000396914 SYT17Q9BSW7 474 aa37.69■■■■□ 3.62
CHCHD4-202ENST00000396914 NUP98P52948 1817 aa37.68■■■■□ 3.62
CHCHD4-202ENST00000396914 FAM177BA6PVY3 158 aa37.68■■■■□ 3.62
CHCHD4-202ENST00000396914 GPTP24298 496 aa37.67■■■■□ 3.62
CHCHD4-202ENST00000396914 PLBD2Q8NHP8 589 aa37.67■■■■□ 3.62
CHCHD4-202ENST00000396914 DDX58O95786 925 aaKnown RBP37.66■■■■□ 3.62
CHCHD4-202ENST00000396914 RIC3Q7Z5B4 369 aa37.66■■■■□ 3.62
CHCHD4-202ENST00000396914 CD2APQ9Y5K6 639 aa37.66■■■■□ 3.62
CHCHD4-202ENST00000396914 NBPF5PQ86XG9 351 aaPredicted RBP37.64■■■■□ 3.62
CHCHD4-202ENST00000396914 HSP90AB3PQ58FF7 597 aa37.63■■■■□ 3.61
CHCHD4-202ENST00000396914 G2E3Q7L622 706 aa37.62■■■■□ 3.61
CHCHD4-202ENST00000396914 AFDNP55196 1824 aaKnown RBP37.62■■■■□ 3.61
CHCHD4-202ENST00000396914 CNBD1Q8NA66 436 aa37.61■■■■□ 3.61
CHCHD4-202ENST00000396914 ATP10DQ9P241 1426 aa37.61■■■■□ 3.61
CHCHD4-202ENST00000396914 NLGN2Q8NFZ4 835 aa37.61■■■■□ 3.61
CHCHD4-202ENST00000396914 CCDC24Q8N4L8 307 aa37.6■■■■□ 3.61
CHCHD4-202ENST00000396914 GTF2E1P29083 439 aaPredicted RBP37.59■■■■□ 3.61
CHCHD4-202ENST00000396914 TCIRG1Q13488 830 aa37.59■■■■□ 3.61
CHCHD4-202ENST00000396914 C10orf71Q711Q0 1435 aa37.59■■■■□ 3.61
CHCHD4-202ENST00000396914 FLIIQ13045 1269 aa37.58■■■■□ 3.61
CHCHD4-202ENST00000396914 FKBP5Q13451 457 aaPredicted RBP37.58■■■■□ 3.61
CHCHD4-202ENST00000396914 ZNF34Q8IZ26 560 aa37.58■■■■□ 3.61
CHCHD4-202ENST00000396914 ST5P78524 1137 aa37.57■■■■□ 3.6
CHCHD4-202ENST00000396914 PRR5LQ6MZQ0 368 aa37.57■■■■□ 3.6
CHCHD4-202ENST00000396914 TPTE2Q6XPS3 522 aa37.57■■■■□ 3.6
CHCHD4-202ENST00000396914 YTHDC1Q96MU7 727 aaKnown RBP37.57■■■■□ 3.6
CHCHD4-202ENST00000396914 UBN2Q6ZU65 1347 aa37.56■■■■□ 3.6
CHCHD4-202ENST00000396914 ARFGEF2Q9Y6D5 1785 aa37.55■■■■□ 3.6
CHCHD4-202ENST00000396914 MAP3K2Q9Y2U5 619 aa37.55■■■■□ 3.6
CHCHD4-202ENST00000396914 NRXN2Q9P2S2 1712 aa37.55■■■■□ 3.6
CHCHD4-202ENST00000396914 CACNA1FO60840 1977 aa37.55■■■■□ 3.6
CHCHD4-202ENST00000396914 PI4KAP2A4QPH2 592 aa37.54■■■■□ 3.6
CHCHD4-202ENST00000396914 ATP5J2-PTCD1G3V325 749 aa37.54■■■■□ 3.6
CHCHD4-202ENST00000396914 CT47B1P0C2W7 299 aaPredicted RBP37.54■■■■□ 3.6
CHCHD4-202ENST00000396914 PARP10Q53GL7 1025 aa37.54■■■■□ 3.6
CHCHD4-202ENST00000396914 KSR2Q6VAB6 950 aa37.54■■■■□ 3.6
CHCHD4-202ENST00000396914 PI4KAP1Q8N8J0 262 aa37.54■■■■□ 3.6
CHCHD4-202ENST00000396914 ZNF428Q96B54 188 aa37.54■■■■□ 3.6
CHCHD4-202ENST00000396914 BCL2L13Q9BXK5 485 aa37.54■■■■□ 3.6
CHCHD4-202ENST00000396914 NYXQ9GZU5 481 aa37.54■■■■□ 3.6
CHCHD4-202ENST00000396914 SUSD4Q5VX71 490 aa37.53■■■■□ 3.6
CHCHD4-202ENST00000396914 PPP1R42Q7Z4L9 355 aa37.53■■■■□ 3.6
CHCHD4-202ENST00000396914 MYD88Q99836 296 aa37.53■■■■□ 3.6
CHCHD4-202ENST00000396914 ANKRD36CQ5JPF3 1778 aa37.53■■■■□ 3.6
CHCHD4-202ENST00000396914 SSH1Q8WYL5 1049 aa37.52■■■■□ 3.6
CHCHD4-202ENST00000396914 TGFB2P61812 414 aa37.51■■■■□ 3.59
CHCHD4-202ENST00000396914 PELP1Q8IZL8 1130 aaKnown RBP37.51■■■■□ 3.59
CHCHD4-202ENST00000396914 SMC4Q9NTJ3 1288 aa37.51■■■■□ 3.59
CHCHD4-202ENST00000396914 KIF13BQ9NQT8 1826 aa37.5■■■■□ 3.59
CHCHD4-202ENST00000396914 A0A0G2JLW4 131 aa37.5■■■■□ 3.59
CHCHD4-202ENST00000396914 NUTM1Q86Y26 1132 aa37.5■■■■□ 3.59
CHCHD4-202ENST00000396914 UTP14AQ9BVJ6 771 aaKnown RBP37.5■■■■□ 3.59
CHCHD4-202ENST00000396914 WWC3Q9ULE0 1092 aa37.5■■■■□ 3.59
CHCHD4-202ENST00000396914 ALDH1L2Q3SY69 923 aa37.49■■■■□ 3.59
CHCHD4-202ENST00000396914 NLRP10Q86W26 655 aa37.49■■■■□ 3.59
CHCHD4-202ENST00000396914 METTL22Q9BUU2 404 aaPredicted RBP37.49■■■■□ 3.59
CHCHD4-202ENST00000396914 NEXNQ0ZGT2 675 aa37.48■■■■□ 3.59
CHCHD4-202ENST00000396914 MRPL50Q8N5N7 158 aaKnown RBP37.48■■■■□ 3.59
CHCHD4-202ENST00000396914 ADCY9O60503 1353 aa37.48■■■■□ 3.59
CHCHD4-202ENST00000396914 DCAF8L1A6NGE4 600 aa37.47■■■■□ 3.59
CHCHD4-202ENST00000396914 DPEP1P16444 411 aa37.47■■■■□ 3.59
CHCHD4-202ENST00000396914 BRIP1Q9BX63 1249 aa37.47■■■■□ 3.59
CHCHD4-202ENST00000396914 ISCA1Q9BUE6 129 aa37.46■■■■□ 3.59
CHCHD4-202ENST00000396914 TRMT112Q9UI30 125 aaKnown RBP37.46■■■■□ 3.59
CHCHD4-202ENST00000396914 PXDNLA1KZ92 1463 aa37.46■■■■□ 3.59
CHCHD4-202ENST00000396914 N4BP2Q86UW6 1770 aaPredicted RBP37.46■■■■□ 3.59
CHCHD4-202ENST00000396914 CHRNA5P30532 468 aa37.45■■■■□ 3.59
CHCHD4-202ENST00000396914 PDE6BP35913 854 aa37.45■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms