RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 TSPYL4Q9UJ04 414 aa24.1■■□□□ 1.45
FXN-203ENST00000396366 ADAMTS8Q9UP79 889 aa24.1■■□□□ 1.45
FXN-203ENST00000396366 COL11A2P13942 1736 aaPredicted RBP24.1■■□□□ 1.45
FXN-203ENST00000396366 NPHP1O15259 732 aa24.09■■□□□ 1.45
FXN-203ENST00000396366 PRELPP51888 382 aa24.09■■□□□ 1.45
FXN-203ENST00000396366 ZNF219Q9P2Y4 722 aaPredicted RBP24.09■■□□□ 1.45
FXN-203ENST00000396366 ZNF652Q9Y2D9 606 aa24.09■■□□□ 1.45
FXN-203ENST00000396366 FAM177BA6PVY3 158 aa24.08■■□□□ 1.45
FXN-203ENST00000396366 MYL6BP14649 208 aa24.08■■□□□ 1.45
FXN-203ENST00000396366 WDR43Q15061 677 aaKnown RBP eCLIP24.08■■□□□ 1.45
FXN-203ENST00000396366 NBPF5PQ86XG9 351 aaPredicted RBP24.08■■□□□ 1.45
FXN-203ENST00000396366 NIP7Q9Y221 180 aaKnown RBP eCLIP24.08■■□□□ 1.45
FXN-203ENST00000396366 ST5P78524 1137 aa24.07■■□□□ 1.44
FXN-203ENST00000396366 TTLL7Q6ZT98 887 aa24.07■■□□□ 1.44
FXN-203ENST00000396366 RUNDC1Q96C34 613 aa24.06■■□□□ 1.44
FXN-203ENST00000396366 NMRK2Q9NPI5 230 aa24.06■■□□□ 1.44
FXN-203ENST00000396366 TRIM35Q9UPQ4 493 aa24.05■■□□□ 1.44
FXN-203ENST00000396366 C21orf2O43822 256 aa24.04■■□□□ 1.44
FXN-203ENST00000396366 PDZRN3Q9UPQ7 1066 aa24.04■■□□□ 1.44
FXN-203ENST00000396366 NFKBIEO00221 500 aa24.03■■□□□ 1.44
FXN-203ENST00000396366 SRGNP10124 158 aa24.03■■□□□ 1.44
FXN-203ENST00000396366 EIF2S2P20042 333 aaKnown RBP24.03■■□□□ 1.44
FXN-203ENST00000396366 LMOD3Q0VAK6 560 aa24.03■■□□□ 1.44
FXN-203ENST00000396366 NUP98P52948 1817 aa24.03■■□□□ 1.44
FXN-203ENST00000396366 CCDC88AQ3V6T2 1871 aa24.02■■□□□ 1.44
FXN-203ENST00000396366 RGL2O15211 777 aa24.02■■□□□ 1.44
FXN-203ENST00000396366 TPTE2Q6XPS3 522 aa24.02■■□□□ 1.44
FXN-203ENST00000396366 ZBTB3Q9H5J0 574 aa24.02■■□□□ 1.44
FXN-203ENST00000396366 SLX4Q8IY92 1834 aa24.02■■□□□ 1.44
FXN-203ENST00000396366 MAP3K15Q6ZN16 1313 aa24.02■■□□□ 1.44
FXN-203ENST00000396366 CACNA1SQ13698 1873 aa24.02■■□□□ 1.44
FXN-203ENST00000396366 PDIA6Q15084 440 aa24.01■■□□□ 1.43
FXN-203ENST00000396366 KRT24Q2M2I5 525 aa24.01■■□□□ 1.43
FXN-203ENST00000396366 STYK1Q6J9G0 422 aa24.01■■□□□ 1.43
FXN-203ENST00000396366 BABAM1Q9NWV8 329 aa24.01■■□□□ 1.43
FXN-203ENST00000396366 LAS1LQ9Y4W2 734 aaKnown RBP24.01■■□□□ 1.43
FXN-203ENST00000396366 CEP350Q5VT06 3117 aa24■■□□□ 1.43
FXN-203ENST00000396366 ERVV-1B6SEH8 477 aa24■■□□□ 1.43
FXN-203ENST00000396366 ANXA1P04083 346 aa24■■□□□ 1.43
FXN-203ENST00000396366 LMNB1P20700 586 aa24■■□□□ 1.43
FXN-203ENST00000396366 PROSER3Q2NL68 480 aa24■■□□□ 1.43
FXN-203ENST00000396366 KIF6Q6ZMV9 814 aa24■■□□□ 1.43
FXN-203ENST00000396366 NECTIN2Q92692 538 aa24■■□□□ 1.43
FXN-203ENST00000396366 MASTLQ96GX5 879 aa24■■□□□ 1.43
FXN-203ENST00000396366 CHL1O00533 1208 aa23.99■■□□□ 1.43
FXN-203ENST00000396366 PRPF40BQ6NWY9 871 aaKnown RBP23.99■■□□□ 1.43
FXN-203ENST00000396366 LRP10Q7Z4F1 713 aa23.99■■□□□ 1.43
FXN-203ENST00000396366 CNKSR1Q969H4 720 aa23.99■■□□□ 1.43
FXN-203ENST00000396366 GPTP24298 496 aa23.98■■□□□ 1.43
FXN-203ENST00000396366 NUTM1Q86Y26 1132 aa23.98■■□□□ 1.43
FXN-203ENST00000396366 KLRG2A4D1S0 409 aaPredicted RBP23.97■■□□□ 1.43
FXN-203ENST00000396366 RRAGCQ9HB90 399 aa23.97■■□□□ 1.43
FXN-203ENST00000396366 FER1L6Q2WGJ9 1857 aa23.96■■□□□ 1.43
FXN-203ENST00000396366 ERBB4Q15303 1308 aa23.96■■□□□ 1.43
FXN-203ENST00000396366 UBN2Q6ZU65 1347 aa23.96■■□□□ 1.43
FXN-203ENST00000396366 GTF2E1P29083 439 aaPredicted RBP23.96■■□□□ 1.43
FXN-203ENST00000396366 KDM2BQ8NHM5 1336 aa23.95■■□□□ 1.42
FXN-203ENST00000396366 TOMM70O94826 608 aa23.95■■□□□ 1.42
FXN-203ENST00000396366 NPR1P16066 1061 aa23.95■■□□□ 1.42
FXN-203ENST00000396366 ERFEQ4G0M1 354 aa23.95■■□□□ 1.42
FXN-203ENST00000396366 CCDC184Q52MB2 194 aa23.95■■□□□ 1.42
FXN-203ENST00000396366 ABCC12Q96J65 1359 aa23.94■■□□□ 1.42
FXN-203ENST00000396366 SUSD4Q5VX71 490 aa23.94■■□□□ 1.42
FXN-203ENST00000396366 ZNF34Q8IZ26 560 aa23.94■■□□□ 1.42
FXN-203ENST00000396366 C7orf43Q8WVR3 580 aa23.94■■□□□ 1.42
FXN-203ENST00000396366 TNRC6CQ9HCJ0 1690 aaKnown RBP23.94■■□□□ 1.42
FXN-203ENST00000396366 ARFGEF2Q9Y6D5 1785 aa23.93■■□□□ 1.42
FXN-203ENST00000396366 APAF1O14727 1248 aa23.93■■□□□ 1.42
FXN-203ENST00000396366 HSPA6P17066 643 aa23.93■■□□□ 1.42
FXN-203ENST00000396366 ZEB1P37275 1124 aaPredicted RBP23.93■■□□□ 1.42
FXN-203ENST00000396366 OLFM4Q6UX06 510 aa23.93■■□□□ 1.42
FXN-203ENST00000396366 GIGYF2Q6Y7W6 1299 aaKnown RBP23.93■■□□□ 1.42
FXN-203ENST00000396366 TIAM2Q8IVF5 1701 aa23.92■■□□□ 1.42
FXN-203ENST00000396366 AIMP1Q12904 312 aaKnown RBP23.91■■□□□ 1.42
FXN-203ENST00000396366 COPS6Q7L5N1 327 aa23.91■■□□□ 1.42
FXN-203ENST00000396366 NYXQ9GZU5 481 aa23.91■■□□□ 1.42
FXN-203ENST00000396366 TAOK3Q9H2K8 898 aa23.91■■□□□ 1.42
FXN-203ENST00000396366 GLTPD2A6NH11 291 aa23.9■■□□□ 1.42
FXN-203ENST00000396366 XAGE3Q8WTP9 111 aa23.9■■□□□ 1.42
FXN-203ENST00000396366 ZC3H4Q9UPT8 1303 aaKnown RBP23.89■■□□□ 1.42
FXN-203ENST00000396366 CFAP44Q96MT7 982 aa23.89■■□□□ 1.41
FXN-203ENST00000396366 NTSR2O95665 410 aa23.88■■□□□ 1.41
FXN-203ENST00000396366 C3orf67Q6ZVT6 689 aa23.88■■□□□ 1.41
FXN-203ENST00000396366 C16orf71Q8IYS4 520 aaPredicted RBP23.88■■□□□ 1.41
FXN-203ENST00000396366 MBIPQ9NS73 344 aa23.88■■□□□ 1.41
FXN-203ENST00000396366 CHPF2Q9P2E5 772 aa23.88■■□□□ 1.41
FXN-203ENST00000396366 DICER1Q9UPY3 1922 aaKnown RBP23.88■■□□□ 1.41
FXN-203ENST00000396366 LTBP3Q9NS15 1303 aa23.87■■□□□ 1.41
FXN-203ENST00000396366 CRY2Q49AN0 593 aa23.87■■□□□ 1.41
FXN-203ENST00000396366 DDX21Q9NR30 783 aaKnown RBP eCLIP23.87■■□□□ 1.41
FXN-203ENST00000396366 ALDH1B1P30837 517 aa23.86■■□□□ 1.41
FXN-203ENST00000396366 CCDC93Q567U6 631 aa23.86■■□□□ 1.41
FXN-203ENST00000396366 SOGA3Q5TF21 947 aa23.86■■□□□ 1.41
FXN-203ENST00000396366 RBM46Q8TBY0 533 aaKnown RBP23.86■■□□□ 1.41
FXN-203ENST00000396366 ZNF853P0CG23 659 aa23.85■■□□□ 1.41
FXN-203ENST00000396366 HDGFL1Q5TGJ6 251 aa23.85■■□□□ 1.41
FXN-203ENST00000396366 DUSP27Q5VZP5 1158 aa23.85■■□□□ 1.41
FXN-203ENST00000396366 SLC51AQ86UW1 340 aa23.85■■□□□ 1.41
FXN-203ENST00000396366 ZNF428Q96B54 188 aa23.85■■□□□ 1.41
FXN-203ENST00000396366 IBTKQ9P2D0 1353 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms