RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 CEMIPQ8WUJ3 1361 aa16.95■□□□□ 0.3
CCHCR1-203ENST00000396268 HS1BP3Q53T59 392 aa16.95■□□□□ 0.3
CCHCR1-203ENST00000396268 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
CCHCR1-203ENST00000396268 SRCIN1Q9C0H9 1055 aa16.95■□□□□ 0.3
CCHCR1-203ENST00000396268 PRDM4Q9UKN5 801 aa16.95■□□□□ 0.3
CCHCR1-203ENST00000396268 SURF6O75683 361 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-203ENST00000396268 C17orf53Q8N3J3 647 aaPredicted RBP16.95■□□□□ 0.3
CCHCR1-203ENST00000396268 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
CCHCR1-203ENST00000396268 CAMTA1Q9Y6Y1 1673 aa16.94■□□□□ 0.3
CCHCR1-203ENST00000396268 USP44Q9H0E7 712 aa16.94■□□□□ 0.3
CCHCR1-203ENST00000396268 IL25Q9H293 177 aa16.94■□□□□ 0.3
CCHCR1-203ENST00000396268 C1orf141Q5JVX7 400 aa16.94■□□□□ 0.3
CCHCR1-203ENST00000396268 RAPGEF4Q8WZA2 1011 aa16.94■□□□□ 0.3
CCHCR1-203ENST00000396268 INTS4Q96HW7 963 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-203ENST00000396268 RNMTO43148 476 aaKnown RBP16.93■□□□□ 0.3
CCHCR1-203ENST00000396268 HDGFL1Q5TGJ6 251 aa16.93■□□□□ 0.3
CCHCR1-203ENST00000396268 ZKSCAN5Q9Y2L8 839 aa16.93■□□□□ 0.3
CCHCR1-203ENST00000396268 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
CCHCR1-203ENST00000396268 PHAXQ9H814 394 aaKnown RBP16.93■□□□□ 0.3
CCHCR1-203ENST00000396268 STAP2Q9UGK3 403 aa16.93■□□□□ 0.3
CCHCR1-203ENST00000396268 FAM208AQ9UK61 1670 aaKnown RBP16.93■□□□□ 0.3
CCHCR1-203ENST00000396268 CPDO75976 1380 aa16.93■□□□□ 0.3
CCHCR1-203ENST00000396268 LMO7Q8WWI1 1683 aa16.92■□□□□ 0.3
CCHCR1-203ENST00000396268 PRAMEF22A3QJZ6 481 aa16.92■□□□□ 0.3
CCHCR1-203ENST00000396268 AMOTQ4VCS5 1084 aa16.92■□□□□ 0.3
CCHCR1-203ENST00000396268 PPP1R42Q7Z4L9 355 aa16.92■□□□□ 0.3
CCHCR1-203ENST00000396268 SYAP1Q96A49 352 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-203ENST00000396268 DTNBO60941 627 aa16.92■□□□□ 0.3
CCHCR1-203ENST00000396268 GADD45BO75293 160 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-203ENST00000396268 TEFQ10587 303 aa16.92■□□□□ 0.3
CCHCR1-203ENST00000396268 LARP6Q9BRS8 491 aaKnown RBP16.92■□□□□ 0.3
CCHCR1-203ENST00000396268 TSPY26PQ9H489 355 aa16.92■□□□□ 0.3
CCHCR1-203ENST00000396268 SOS1Q07889 1333 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-203ENST00000396268 PLCB2Q00722 1185 aa16.91■□□□□ 0.3
CCHCR1-203ENST00000396268 BTBD11A6QL63 1104 aa16.91■□□□□ 0.3
CCHCR1-203ENST00000396268 LARP1Q6PKG0 1096 aaKnown RBP16.91■□□□□ 0.3
CCHCR1-203ENST00000396268 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
CCHCR1-203ENST00000396268 NHSL1Q5SYE7 1610 aa16.9■□□□□ 0.3
CCHCR1-203ENST00000396268 LTBP4Q8N2S1 1624 aa16.9■□□□□ 0.3
CCHCR1-203ENST00000396268 SRGAP3O43295 1099 aa16.9■□□□□ 0.3
CCHCR1-203ENST00000396268 ANXA1P04083 346 aa16.9■□□□□ 0.3
CCHCR1-203ENST00000396268 ROBO1Q9Y6N7 1651 aa16.9■□□□□ 0.3
CCHCR1-203ENST00000396268 CYP27B1O15528 508 aa16.9■□□□□ 0.3
CCHCR1-203ENST00000396268 TATP17735 454 aaPredicted RBP16.9■□□□□ 0.3
CCHCR1-203ENST00000396268 PIP4K2BP78356 416 aa16.9■□□□□ 0.3
CCHCR1-203ENST00000396268 SLC39A6Q13433 755 aa16.9■□□□□ 0.3
CCHCR1-203ENST00000396268 USP48Q86UV5 1035 aa16.9■□□□□ 0.3
CCHCR1-203ENST00000396268 CCDC39Q9UFE4 941 aa16.9■□□□□ 0.3
CCHCR1-203ENST00000396268 WDR33Q9C0J8 1336 aaKnown RBP16.9■□□□□ 0.3
CCHCR1-203ENST00000396268 ZNF500O60304 480 aaPredicted RBP16.89■□□□□ 0.3
CCHCR1-203ENST00000396268 EIF4A1P60842 406 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-203ENST00000396268 ABCA3Q99758 1704 aa16.89■□□□□ 0.29
CCHCR1-203ENST00000396268 HSPA4P34932 840 aa16.89■□□□□ 0.29
CCHCR1-203ENST00000396268 RHPN1Q8TCX5 695 aa16.89■□□□□ 0.29
CCHCR1-203ENST00000396268 SSH3Q8TE77 659 aa16.89■□□□□ 0.29
CCHCR1-203ENST00000396268 PHKG2P15735 406 aa16.88■□□□□ 0.29
CCHCR1-203ENST00000396268 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-203ENST00000396268 OS9Q13438 667 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-203ENST00000396268 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
CCHCR1-203ENST00000396268 COL5A2P05997 1499 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-203ENST00000396268 PHF14O94880 888 aa16.87■□□□□ 0.29
CCHCR1-203ENST00000396268 NFATC2IPQ8NCF5 419 aa16.87■□□□□ 0.29
CCHCR1-203ENST00000396268 WDR17Q8IZU2 1322 aa16.87■□□□□ 0.29
CCHCR1-203ENST00000396268 RAB11FIP3O75154 756 aa16.86■□□□□ 0.29
CCHCR1-203ENST00000396268 NBPF7P0C2Y1 421 aaPredicted RBP16.86■□□□□ 0.29
CCHCR1-203ENST00000396268 CBX1P83916 185 aa16.86■□□□□ 0.29
CCHCR1-203ENST00000396268 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
CCHCR1-203ENST00000396268 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCHCR1-203ENST00000396268 SGSM2O43147 1006 aa16.86■□□□□ 0.29
CCHCR1-203ENST00000396268 CNTROBQ8N137 903 aa16.86■□□□□ 0.29
CCHCR1-203ENST00000396268 KIF1BPQ96EK5 621 aa16.86■□□□□ 0.29
CCHCR1-203ENST00000396268 BTG4Q9NY30 223 aa16.86■□□□□ 0.29
CCHCR1-203ENST00000396268 AOX1Q06278 1338 aa16.85■□□□□ 0.29
CCHCR1-203ENST00000396268 SASS6Q6UVJ0 657 aa16.85■□□□□ 0.29
CCHCR1-203ENST00000396268 PI4K2BQ8TCG2 481 aa16.85■□□□□ 0.29
CCHCR1-203ENST00000396268 TTC12Q9H892 705 aaPredicted RBP16.85■□□□□ 0.29
CCHCR1-203ENST00000396268 CNPY2Q9Y2B0 182 aa16.85■□□□□ 0.29
CCHCR1-203ENST00000396268 SNX14Q9Y5W7 946 aa16.85■□□□□ 0.29
CCHCR1-203ENST00000396268 CPA1P15085 419 aa16.85■□□□□ 0.29
CCHCR1-203ENST00000396268 EVA1CP58658 441 aa16.85■□□□□ 0.29
CCHCR1-203ENST00000396268 RASEFQ8IZ41 740 aa16.85■□□□□ 0.29
CCHCR1-203ENST00000396268 BCL11BQ9C0K0 894 aaPredicted RBP16.85■□□□□ 0.29
CCHCR1-203ENST00000396268 RAD50Q92878 1312 aa16.85■□□□□ 0.29
CCHCR1-203ENST00000396268 AK2P54819 239 aa16.84■□□□□ 0.29
CCHCR1-203ENST00000396268 PI4KAP2A4QPH2 592 aa16.84■□□□□ 0.29
CCHCR1-203ENST00000396268 PI4KAP1Q8N8J0 262 aa16.84■□□□□ 0.29
CCHCR1-203ENST00000396268 CHPF2Q9P2E5 772 aa16.84■□□□□ 0.29
CCHCR1-203ENST00000396268 IGSF3O75054 1194 aa16.83■□□□□ 0.29
CCHCR1-203ENST00000396268 MCM5P33992 734 aa16.83■□□□□ 0.29
CCHCR1-203ENST00000396268 CSPP1Q1MSJ5 1256 aa16.83■□□□□ 0.29
CCHCR1-203ENST00000396268 MAP7D2Q96T17 732 aa16.83■□□□□ 0.29
CCHCR1-203ENST00000396268 DYNC1I1O14576 645 aa16.83■□□□□ 0.28
CCHCR1-203ENST00000396268 FIBPO43427 364 aa16.83■□□□□ 0.28
CCHCR1-203ENST00000396268 KDM3BQ7LBC6 1761 aa16.83■□□□□ 0.28
CCHCR1-203ENST00000396268 USP25Q9UHP3 1055 aa16.83■□□□□ 0.28
CCHCR1-203ENST00000396268 SMC3Q9UQE7 1217 aa16.83■□□□□ 0.28
CCHCR1-203ENST00000396268 ADAMTS2O95450 1211 aa16.83■□□□□ 0.28
CCHCR1-203ENST00000396268 PROSER3Q2NL68 480 aa16.83■□□□□ 0.28
CCHCR1-203ENST00000396268 DIAPH3Q9NSV4 1193 aa16.83■□□□□ 0.28
CCHCR1-203ENST00000396268 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms