RNA–Protein interactions for RNA: ENST00000395388.6

HLA-DRA-202, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DRA, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-202ENST00000395388 USPL1Q5W0Q7 1092 aa16■□□□□ 0.15
HLA-DRA-202ENST00000395388 TTLL7Q6ZT98 887 aa16■□□□□ 0.15
HLA-DRA-202ENST00000395388 AMIGO3Q86WK7 504 aa16■□□□□ 0.15
HLA-DRA-202ENST00000395388 BCL2L13Q9BXK5 485 aa16■□□□□ 0.15
HLA-DRA-202ENST00000395388 RCAN3Q9UKA8 241 aa16■□□□□ 0.15
HLA-DRA-202ENST00000395388 MAP3K15Q6ZN16 1313 aa15.99■□□□□ 0.15
HLA-DRA-202ENST00000395388 IPO8O15397 1037 aaKnown RBP15.99■□□□□ 0.15
HLA-DRA-202ENST00000395388 LRP10Q7Z4F1 713 aa15.99■□□□□ 0.15
HLA-DRA-202ENST00000395388 NLGN1Q8N2Q7 840 aa15.99■□□□□ 0.15
HLA-DRA-202ENST00000395388 PLBD2Q8NHP8 589 aa15.99■□□□□ 0.15
HLA-DRA-202ENST00000395388 ZBTB3Q9H5J0 574 aa15.99■□□□□ 0.15
HLA-DRA-202ENST00000395388 USP42Q9H9J4 1324 aaKnown RBP15.98■□□□□ 0.15
HLA-DRA-202ENST00000395388 QSER1Q2KHR3 1735 aa15.98■□□□□ 0.15
HLA-DRA-202ENST00000395388 CLEC4GQ6UXB4 293 aa15.98■□□□□ 0.15
HLA-DRA-202ENST00000395388 KSR2Q6VAB6 950 aa15.98■□□□□ 0.15
HLA-DRA-202ENST00000395388 G2E3Q7L622 706 aa15.98■□□□□ 0.15
HLA-DRA-202ENST00000395388 SRP68Q9UHB9 627 aaKnown RBP15.98■□□□□ 0.15
HLA-DRA-202ENST00000395388 PTPRCP08575 1304 aa15.97■□□□□ 0.15
HLA-DRA-202ENST00000395388 KIF16BQ96L93 1317 aa15.97■□□□□ 0.15
HLA-DRA-202ENST00000395388 RGL2O15211 777 aa15.97■□□□□ 0.15
HLA-DRA-202ENST00000395388 BCAR3O75815 825 aa15.97■□□□□ 0.15
HLA-DRA-202ENST00000395388 CAMTA2O94983 1202 aa15.97■□□□□ 0.15
HLA-DRA-202ENST00000395388 BRPF1P55201 1214 aaPredicted RBP15.97■□□□□ 0.15
HLA-DRA-202ENST00000395388 HSP90AB3PQ58FF7 597 aa15.97■□□□□ 0.15
HLA-DRA-202ENST00000395388 NOB1Q9ULX3 412 aaKnown RBP15.97■□□□□ 0.15
HLA-DRA-202ENST00000395388 PI4KAP2A4QPH2 592 aa15.96■□□□□ 0.15
HLA-DRA-202ENST00000395388 GYS1P13807 737 aa15.96■□□□□ 0.15
HLA-DRA-202ENST00000395388 NEXNQ0ZGT2 675 aa15.96■□□□□ 0.15
HLA-DRA-202ENST00000395388 GIGYF2Q6Y7W6 1299 aaKnown RBP15.96■□□□□ 0.15
HLA-DRA-202ENST00000395388 PI4KAP1Q8N8J0 262 aa15.96■□□□□ 0.15
HLA-DRA-202ENST00000395388 FRAT1Q92837 279 aaPredicted RBP15.96■□□□□ 0.15
HLA-DRA-202ENST00000395388 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.95■□□□□ 0.14
HLA-DRA-202ENST00000395388 API5Q9BZZ5 524 aaKnown RBP15.95■□□□□ 0.14
HLA-DRA-202ENST00000395388 MAP3K2Q9Y2U5 619 aa15.95■□□□□ 0.14
HLA-DRA-202ENST00000395388 TUBGCP6Q96RT7 1819 aa15.95■□□□□ 0.14
HLA-DRA-202ENST00000395388 HLFQ16534 295 aa15.94■□□□□ 0.14
HLA-DRA-202ENST00000395388 ARHGAP45Q92619 1136 aa15.94■□□□□ 0.14
HLA-DRA-202ENST00000395388 SETDB2Q96T68 719 aa15.94■□□□□ 0.14
HLA-DRA-202ENST00000395388 PDGFDQ9GZP0 370 aaPredicted RBP15.94■□□□□ 0.14
HLA-DRA-202ENST00000395388 MTFR1LQ9H019 292 aa15.94■□□□□ 0.14
HLA-DRA-202ENST00000395388 ZBTB7AO95365 584 aa15.93■□□□□ 0.14
HLA-DRA-202ENST00000395388 CENPBP07199 599 aaPredicted RBP15.93■□□□□ 0.14
HLA-DRA-202ENST00000395388 POLD1P28340 1107 aa15.93■□□□□ 0.14
HLA-DRA-202ENST00000395388 TCIRG1Q13488 830 aa15.93■□□□□ 0.14
HLA-DRA-202ENST00000395388 FKBP8Q14318 412 aa15.93■□□□□ 0.14
HLA-DRA-202ENST00000395388 ZKSCAN2Q63HK3 967 aa15.93■□□□□ 0.14
HLA-DRA-202ENST00000395388 BICDL1Q6ZP65 573 aa15.93■□□□□ 0.14
HLA-DRA-202ENST00000395388 DNAAF4Q8WXU2 420 aa15.93■□□□□ 0.14
HLA-DRA-202ENST00000395388 NIP7Q9Y221 180 aaKnown RBP eCLIP15.93■□□□□ 0.14
HLA-DRA-202ENST00000395388 MS4A1P11836 297 aa15.92■□□□□ 0.14
HLA-DRA-202ENST00000395388 MSL1Q68DK7 614 aa15.92■□□□□ 0.14
HLA-DRA-202ENST00000395388 SLC4A10Q6U841 1118 aa15.92■□□□□ 0.14
HLA-DRA-202ENST00000395388 MYD88Q99836 296 aa15.92■□□□□ 0.14
HLA-DRA-202ENST00000395388 METTL22Q9BUU2 404 aaPredicted RBP15.92■□□□□ 0.14
HLA-DRA-202ENST00000395388 BCL2L12Q9HB09 334 aa15.92■□□□□ 0.14
HLA-DRA-202ENST00000395388 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
HLA-DRA-202ENST00000395388 PARP3Q9Y6F1 533 aa15.92■□□□□ 0.14
HLA-DRA-202ENST00000395388 C4AP0C0L4 1744 aa15.91■□□□□ 0.14
HLA-DRA-202ENST00000395388 NPHP1O15259 732 aa15.91■□□□□ 0.14
HLA-DRA-202ENST00000395388 TBC1D9BQ66K14 1250 aa15.91■□□□□ 0.14
HLA-DRA-202ENST00000395388 SPON1Q9HCB6 807 aa15.91■□□□□ 0.14
HLA-DRA-202ENST00000395388 F6X3S4 739 aa15.9■□□□□ 0.14
HLA-DRA-202ENST00000395388 GPTP24298 496 aa15.9■□□□□ 0.14
HLA-DRA-202ENST00000395388 GTF2E1P29083 439 aaPredicted RBP15.9■□□□□ 0.14
HLA-DRA-202ENST00000395388 TM4SF1P30408 202 aa15.9■□□□□ 0.14
HLA-DRA-202ENST00000395388 NFIXQ14938 502 aa15.9■□□□□ 0.14
HLA-DRA-202ENST00000395388 PARP10Q53GL7 1025 aa15.9■□□□□ 0.14
HLA-DRA-202ENST00000395388 ATF7IPQ6VMQ6 1270 aa15.9■□□□□ 0.14
HLA-DRA-202ENST00000395388 PPP1R42Q7Z4L9 355 aa15.9■□□□□ 0.14
HLA-DRA-202ENST00000395388 ZNF34Q8IZ26 560 aa15.9■□□□□ 0.14
HLA-DRA-202ENST00000395388 NUP98P52948 1817 aa15.89■□□□□ 0.13
HLA-DRA-202ENST00000395388 ADCY9O60503 1353 aa15.89■□□□□ 0.13
HLA-DRA-202ENST00000395388 ATP5J2-PTCD1G3V325 749 aa15.89■□□□□ 0.13
HLA-DRA-202ENST00000395388 MMP10P09238 476 aa15.89■□□□□ 0.13
HLA-DRA-202ENST00000395388 TPTE2Q6XPS3 522 aa15.89■□□□□ 0.13
HLA-DRA-202ENST00000395388 FTSJ3Q8IY81 847 aaKnown RBP15.89■□□□□ 0.13
HLA-DRA-202ENST00000395388 NYXQ9GZU5 481 aa15.89■□□□□ 0.13
HLA-DRA-202ENST00000395388 FAM177BA6PVY3 158 aa15.88■□□□□ 0.13
HLA-DRA-202ENST00000395388 TRIM28Q13263 835 aaKnown RBP15.88■□□□□ 0.13
HLA-DRA-202ENST00000395388 NBPF5PQ86XG9 351 aaPredicted RBP15.88■□□□□ 0.13
HLA-DRA-202ENST00000395388 CCDC191Q8NCU4 936 aa15.88■□□□□ 0.13
HLA-DRA-202ENST00000395388 LINS1Q8NG48 757 aa15.88■□□□□ 0.13
HLA-DRA-202ENST00000395388 ISCA1Q9BUE6 129 aa15.88■□□□□ 0.13
HLA-DRA-202ENST00000395388 SRCIN1Q9C0H9 1055 aa15.88■□□□□ 0.13
HLA-DRA-202ENST00000395388 BCORQ6W2J9 1755 aa15.87■□□□□ 0.13
HLA-DRA-202ENST00000395388 CASZ1Q86V15 1759 aa15.87■□□□□ 0.13
HLA-DRA-202ENST00000395388 ATP10DQ9P241 1426 aa15.87■□□□□ 0.13
HLA-DRA-202ENST00000395388 SCN7AQ01118 1682 aa15.87■□□□□ 0.13
HLA-DRA-202ENST00000395388 SERPINB2P05120 415 aa15.87■□□□□ 0.13
HLA-DRA-202ENST00000395388 CCT4P50991 539 aaKnown RBP15.87■□□□□ 0.13
HLA-DRA-202ENST00000395388 DZIP1LQ8IYY4 767 aaKnown RBP15.87■□□□□ 0.13
HLA-DRA-202ENST00000395388 CLUAP1Q96AJ1 413 aa15.87■□□□□ 0.13
HLA-DRA-202ENST00000395388 UTP14AQ9BVJ6 771 aaKnown RBP15.87■□□□□ 0.13
HLA-DRA-202ENST00000395388 CWC25Q9NXE8 425 aaPredicted RBP15.87■□□□□ 0.13
HLA-DRA-202ENST00000395388 CARMIL3Q8ND23 1372 aa15.87■□□□□ 0.13
HLA-DRA-202ENST00000395388 ARFGEF2Q9Y6D5 1785 aa15.86■□□□□ 0.13
HLA-DRA-202ENST00000395388 ALDH1L1O75891 902 aa15.86■□□□□ 0.13
HLA-DRA-202ENST00000395388 TRIM27P14373 513 aa15.86■□□□□ 0.13
HLA-DRA-202ENST00000395388 BEND3Q5T5X7 828 aa15.86■□□□□ 0.13
HLA-DRA-202ENST00000395388 NLRP10Q86W26 655 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms