RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 HOXD11P31277 338 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQA1-203ENST00000395363 TMPOP42166 694 aaKnown RBP15.33■□□□□ 0.04
HLA-DQA1-203ENST00000395363 KRT24Q2M2I5 525 aa15.33■□□□□ 0.04
HLA-DQA1-203ENST00000395363 PIM2Q9P1W9 311 aa15.33■□□□□ 0.04
HLA-DQA1-203ENST00000395363 ZNF219Q9P2Y4 722 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQA1-203ENST00000395363 ADAMTS8Q9UP79 889 aa15.33■□□□□ 0.04
HLA-DQA1-203ENST00000395363 LAMB2P55268 1798 aa15.33■□□□□ 0.04
HLA-DQA1-203ENST00000395363 TAF1P21675 1872 aa15.33■□□□□ 0.04
HLA-DQA1-203ENST00000395363 GIGYF1O75420 1035 aaPredicted RBP15.32■□□□□ 0.04
HLA-DQA1-203ENST00000395363 ANXA1P04083 346 aa15.32■□□□□ 0.04
HLA-DQA1-203ENST00000395363 HLFQ16534 295 aa15.32■□□□□ 0.04
HLA-DQA1-203ENST00000395363 DALRD3Q5D0E6 543 aaKnown RBP15.32■□□□□ 0.04
HLA-DQA1-203ENST00000395363 C2CD5Q86YS7 1000 aa15.32■□□□□ 0.04
HLA-DQA1-203ENST00000395363 NECTIN2Q92692 538 aa15.32■□□□□ 0.04
HLA-DQA1-203ENST00000395363 MYL6BP14649 208 aa15.31■□□□□ 0.04
HLA-DQA1-203ENST00000395363 PRELPP51888 382 aa15.31■□□□□ 0.04
HLA-DQA1-203ENST00000395363 TTLL7Q6ZT98 887 aa15.31■□□□□ 0.04
HLA-DQA1-203ENST00000395363 TSPYL4Q9UJ04 414 aa15.31■□□□□ 0.04
HLA-DQA1-203ENST00000395363 WDR43Q15061 677 aaKnown RBP eCLIP15.3■□□□□ 0.04
HLA-DQA1-203ENST00000395363 PROSER3Q2NL68 480 aa15.3■□□□□ 0.04
HLA-DQA1-203ENST00000395363 TRIM35Q9UPQ4 493 aa15.3■□□□□ 0.04
HLA-DQA1-203ENST00000395363 C1QTNF8P60827 252 aa15.29■□□□□ 0.04
HLA-DQA1-203ENST00000395363 C9orf131Q5VYM1 1079 aa15.29■□□□□ 0.04
HLA-DQA1-203ENST00000395363 NPM2Q86SE8 214 aaKnown RBP15.29■□□□□ 0.04
HLA-DQA1-203ENST00000395363 CNBD1Q8NA66 436 aa15.29■□□□□ 0.04
HLA-DQA1-203ENST00000395363 ZNF428Q96B54 188 aa15.29■□□□□ 0.04
HLA-DQA1-203ENST00000395363 GPBP1L1Q9HC44 474 aaPredicted RBP15.29■□□□□ 0.04
HLA-DQA1-203ENST00000395363 LAS1LQ9Y4W2 734 aaKnown RBP15.29■□□□□ 0.04
HLA-DQA1-203ENST00000395363 EIF2S2P20042 333 aaKnown RBP15.28■□□□□ 0.04
HLA-DQA1-203ENST00000395363 SLC51AQ86UW1 340 aa15.28■□□□□ 0.04
HLA-DQA1-203ENST00000395363 ZNF622Q969S3 477 aaKnown RBP eCLIP15.28■□□□□ 0.04
HLA-DQA1-203ENST00000395363 SETDB2Q96T68 719 aa15.28■□□□□ 0.04
HLA-DQA1-203ENST00000395363 ABCC12Q96J65 1359 aa15.27■□□□□ 0.04
HLA-DQA1-203ENST00000395363 NPHP1O15259 732 aa15.27■□□□□ 0.04
HLA-DQA1-203ENST00000395363 RUNDC1Q96C34 613 aa15.27■□□□□ 0.04
HLA-DQA1-203ENST00000395363 ZBTB3Q9H5J0 574 aa15.27■□□□□ 0.04
HLA-DQA1-203ENST00000395363 RNF181Q9P0P0 153 aa15.27■□□□□ 0.04
HLA-DQA1-203ENST00000395363 NIP7Q9Y221 180 aaKnown RBP eCLIP15.27■□□□□ 0.04
HLA-DQA1-203ENST00000395363 GPTP24298 496 aa15.26■□□□□ 0.03
HLA-DQA1-203ENST00000395363 NBPF5PQ86XG9 351 aaPredicted RBP15.26■□□□□ 0.03
HLA-DQA1-203ENST00000395363 PNISRQ8TF01 805 aaKnown RBP15.26■□□□□ 0.03
HLA-DQA1-203ENST00000395363 RNF39Q9H2S5 420 aa15.26■□□□□ 0.03
HLA-DQA1-203ENST00000395363 PNNQ9H307 717 aaKnown RBP15.26■□□□□ 0.03
HLA-DQA1-203ENST00000395363 NMRK2Q9NPI5 230 aa15.26■□□□□ 0.03
HLA-DQA1-203ENST00000395363 H0YIN7 160 aa15.25■□□□□ 0.03
HLA-DQA1-203ENST00000395363 OLFM4Q6UX06 510 aa15.25■□□□□ 0.03
HLA-DQA1-203ENST00000395363 NUTM1Q86Y26 1132 aa15.25■□□□□ 0.03
HLA-DQA1-203ENST00000395363 TTLL6Q8N841 843 aa15.25■□□□□ 0.03
HLA-DQA1-203ENST00000395363 UBN2Q6ZU65 1347 aa15.24■□□□□ 0.03
HLA-DQA1-203ENST00000395363 NFKBIEO00221 500 aa15.24■□□□□ 0.03
HLA-DQA1-203ENST00000395363 KIF3CO14782 793 aa15.24■□□□□ 0.03
HLA-DQA1-203ENST00000395363 C21orf2O43822 256 aa15.24■□□□□ 0.03
HLA-DQA1-203ENST00000395363 PDIA6Q15084 440 aa15.24■□□□□ 0.03
HLA-DQA1-203ENST00000395363 LRP10Q7Z4F1 713 aa15.24■□□□□ 0.03
HLA-DQA1-203ENST00000395363 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
HLA-DQA1-203ENST00000395363 BRIP1Q9BX63 1249 aa15.24■□□□□ 0.03
HLA-DQA1-203ENST00000395363 DDX60Q8IY21 1712 aaKnown RBP15.23■□□□□ 0.03
HLA-DQA1-203ENST00000395363 MAP3K15Q6ZN16 1313 aa15.23■□□□□ 0.03
HLA-DQA1-203ENST00000395363 APAF1O14727 1248 aa15.23■□□□□ 0.03
HLA-DQA1-203ENST00000395363 ST5P78524 1137 aa15.23■□□□□ 0.03
HLA-DQA1-203ENST00000395363 ZNF652Q9Y2D9 606 aa15.22■□□□□ 0.03
HLA-DQA1-203ENST00000395363 SRGNP10124 158 aa15.21■□□□□ 0.03
HLA-DQA1-203ENST00000395363 PDE6BP35913 854 aa15.21■□□□□ 0.03
HLA-DQA1-203ENST00000395363 LMOD3Q0VAK6 560 aa15.21■□□□□ 0.03
HLA-DQA1-203ENST00000395363 AIMP1Q12904 312 aaKnown RBP15.21■□□□□ 0.03
HLA-DQA1-203ENST00000395363 PRPF40BQ6NWY9 871 aaKnown RBP15.21■□□□□ 0.03
HLA-DQA1-203ENST00000395363 CLEC4GQ6UXB4 293 aa15.21■□□□□ 0.03
HLA-DQA1-203ENST00000395363 KIF6Q6ZMV9 814 aa15.21■□□□□ 0.03
HLA-DQA1-203ENST00000395363 COL4A1P02462 1669 aa15.2■□□□□ 0.02
HLA-DQA1-203ENST00000395363 CHL1O00533 1208 aa15.2■□□□□ 0.02
HLA-DQA1-203ENST00000395363 ERFEQ4G0M1 354 aa15.2■□□□□ 0.02
HLA-DQA1-203ENST00000395363 C3orf67Q6ZVT6 689 aa15.2■□□□□ 0.02
HLA-DQA1-203ENST00000395363 ZNF316A6NFI3 1004 aaPredicted RBP15.19■□□□□ 0.02
HLA-DQA1-203ENST00000395363 SUSD4Q5VX71 490 aa15.19■□□□□ 0.02
HLA-DQA1-203ENST00000395363 XAGE3Q8WTP9 111 aa15.19■□□□□ 0.02
HLA-DQA1-203ENST00000395363 MBIPQ9NS73 344 aa15.19■□□□□ 0.02
HLA-DQA1-203ENST00000395363 CHPF2Q9P2E5 772 aa15.19■□□□□ 0.02
HLA-DQA1-203ENST00000395363 ZEB1P37275 1124 aaPredicted RBP15.18■□□□□ 0.02
HLA-DQA1-203ENST00000395363 WDR90Q96KV7 1748 aa15.17■□□□□ 0.02
HLA-DQA1-203ENST00000395363 SPEF2Q9C093 1822 aa15.17■□□□□ 0.02
HLA-DQA1-203ENST00000395363 ELL2O00472 640 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQA1-203ENST00000395363 COPS6Q7L5N1 327 aa15.17■□□□□ 0.02
HLA-DQA1-203ENST00000395363 SYNE4Q8N205 404 aa15.17■□□□□ 0.02
HLA-DQA1-203ENST00000395363 MASTLQ96GX5 879 aa15.17■□□□□ 0.02
HLA-DQA1-203ENST00000395363 COL4A5P29400 1685 aa15.16■□□□□ 0.02
HLA-DQA1-203ENST00000395363 ERVV-1B6SEH8 477 aa15.16■□□□□ 0.02
HLA-DQA1-203ENST00000395363 NTSR2O95665 410 aa15.16■□□□□ 0.02
HLA-DQA1-203ENST00000395363 LMNB1P20700 586 aa15.16■□□□□ 0.02
HLA-DQA1-203ENST00000395363 GTF2E1P29083 439 aaPredicted RBP15.16■□□□□ 0.02
HLA-DQA1-203ENST00000395363 STYK1Q6J9G0 422 aa15.16■□□□□ 0.02
HLA-DQA1-203ENST00000395363 TPTE2Q6XPS3 522 aa15.16■□□□□ 0.02
HLA-DQA1-203ENST00000395363 GIGYF2Q6Y7W6 1299 aaKnown RBP15.16■□□□□ 0.02
HLA-DQA1-203ENST00000395363 ZNF34Q8IZ26 560 aa15.16■□□□□ 0.02
HLA-DQA1-203ENST00000395363 RRAGCQ9HB90 399 aa15.16■□□□□ 0.02
HLA-DQA1-203ENST00000395363 ERBB4Q15303 1308 aa15.16■□□□□ 0.02
HLA-DQA1-203ENST00000395363 TCERG1O14776 1098 aaKnown RBP15.15■□□□□ 0.02
HLA-DQA1-203ENST00000395363 HDGFL1Q5TGJ6 251 aa15.15■□□□□ 0.02
HLA-DQA1-203ENST00000395363 DUSP27Q5VZP5 1158 aa15.15■□□□□ 0.02
HLA-DQA1-203ENST00000395363 NPR1P16066 1061 aa15.14■□□□□ 0.01
HLA-DQA1-203ENST00000395363 C7orf43Q8WVR3 580 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms