RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 GYS1P13807 737 aa10.88□□□□□ -0.67
HERC4-203ENST00000395185 KRT24Q2M2I5 525 aa10.88□□□□□ -0.67
HERC4-203ENST00000395185 TWISTNBQ3B726 338 aaPredicted RBP10.88□□□□□ -0.67
HERC4-203ENST00000395185 SSH1Q8WYL5 1049 aa10.88□□□□□ -0.67
HERC4-203ENST00000395185 ZBTB1Q9Y2K1 713 aa10.88□□□□□ -0.67
HERC4-203ENST00000395185 GIGYF1O75420 1035 aaPredicted RBP10.87□□□□□ -0.67
HERC4-203ENST00000395185 BCAR3O75815 825 aa10.87□□□□□ -0.67
HERC4-203ENST00000395185 EIF5P55010 431 aaKnown RBP10.87□□□□□ -0.67
HERC4-203ENST00000395185 USPL1Q5W0Q7 1092 aa10.87□□□□□ -0.67
HERC4-203ENST00000395185 PLCD3Q8N3E9 789 aa10.87□□□□□ -0.67
HERC4-203ENST00000395185 CHMP4AQ9BY43 222 aa10.87□□□□□ -0.67
HERC4-203ENST00000395185 USP16Q9Y5T5 823 aa10.87□□□□□ -0.67
HERC4-203ENST00000395185 USP42Q9H9J4 1324 aaKnown RBP10.86□□□□□ -0.67
HERC4-203ENST00000395185 GRIN3BO60391 1043 aa10.86□□□□□ -0.67
HERC4-203ENST00000395185 RRP1P56182 461 aaKnown RBP10.86□□□□□ -0.67
HERC4-203ENST00000395185 PELP1Q8IZL8 1130 aaKnown RBP10.86□□□□□ -0.67
HERC4-203ENST00000395185 MRPL50Q8N5N7 158 aaKnown RBP10.86□□□□□ -0.67
HERC4-203ENST00000395185 SRP68Q9UHB9 627 aaKnown RBP10.86□□□□□ -0.67
HERC4-203ENST00000395185 SCN11AQ9UI33 1791 aa10.85□□□□□ -0.67
HERC4-203ENST00000395185 LRP5O75197 1615 aa10.85□□□□□ -0.67
HERC4-203ENST00000395185 NPHP1O15259 732 aa10.85□□□□□ -0.67
HERC4-203ENST00000395185 TGFB2P61812 414 aa10.85□□□□□ -0.67
HERC4-203ENST00000395185 ARHGAP45Q92619 1136 aa10.85□□□□□ -0.67
HERC4-203ENST00000395185 TBC1D2BQ9UPU7 963 aa10.85□□□□□ -0.67
HERC4-203ENST00000395185 ZNF652Q9Y2D9 606 aa10.85□□□□□ -0.67
HERC4-203ENST00000395185 PAPPAQ13219 1627 aa10.84□□□□□ -0.67
HERC4-203ENST00000395185 ELL2O00472 640 aaPredicted RBP10.84□□□□□ -0.67
HERC4-203ENST00000395185 TM4SF1P30408 202 aa10.84□□□□□ -0.67
HERC4-203ENST00000395185 DZIP3Q86Y13 1208 aaKnown RBP10.84□□□□□ -0.67
HERC4-203ENST00000395185 SETDB2Q96T68 719 aa10.84□□□□□ -0.67
HERC4-203ENST00000395185 SIPA1L3O60292 1781 aaPredicted RBP10.84□□□□□ -0.67
HERC4-203ENST00000395185 LY75O60449 1722 aa10.84□□□□□ -0.67
HERC4-203ENST00000395185 TOGARAM1Q9Y4F4 1720 aa10.84□□□□□ -0.67
HERC4-203ENST00000395185 COL15A1P39059 1388 aa10.83□□□□□ -0.68
HERC4-203ENST00000395185 EIF2S2P20042 333 aaKnown RBP10.83□□□□□ -0.68
HERC4-203ENST00000395185 PDE3AQ14432 1141 aa10.83□□□□□ -0.68
HERC4-203ENST00000395185 ERICH6BQ5W0A0 696 aa10.83□□□□□ -0.68
HERC4-203ENST00000395185 CLEC4GQ6UXB4 293 aa10.83□□□□□ -0.68
HERC4-203ENST00000395185 BICDL1Q6ZP65 573 aa10.83□□□□□ -0.68
HERC4-203ENST00000395185 C4BP0C0L5 1744 aa10.83□□□□□ -0.68
HERC4-203ENST00000395185 PRAMEF22A3QJZ6 481 aa10.82□□□□□ -0.68
HERC4-203ENST00000395185 RGL2O15211 777 aa10.82□□□□□ -0.68
HERC4-203ENST00000395185 SERPINB2P05120 415 aa10.82□□□□□ -0.68
HERC4-203ENST00000395185 NFIXQ14938 502 aa10.82□□□□□ -0.68
HERC4-203ENST00000395185 PDIA6Q15084 440 aa10.82□□□□□ -0.68
HERC4-203ENST00000395185 KIF6Q6ZMV9 814 aa10.82□□□□□ -0.68
HERC4-203ENST00000395185 LRP10Q7Z4F1 713 aa10.82□□□□□ -0.68
HERC4-203ENST00000395185 NLGN2Q8NFZ4 835 aa10.82□□□□□ -0.68
HERC4-203ENST00000395185 KDM3BQ7LBC6 1761 aa10.82□□□□□ -0.68
HERC4-203ENST00000395185 ITGB4P16144 1822 aa10.81□□□□□ -0.68
HERC4-203ENST00000395185 CCDC30Q5VVM6 783 aa10.81□□□□□ -0.68
HERC4-203ENST00000395185 SMC4Q9NTJ3 1288 aa10.81□□□□□ -0.68
HERC4-203ENST00000395185 PDZRN3Q9UPQ7 1066 aa10.81□□□□□ -0.68
HERC4-203ENST00000395185 ERBB4Q15303 1308 aa10.81□□□□□ -0.68
HERC4-203ENST00000395185 KCPQ6ZWJ8 1503 aa10.8□□□□□ -0.68
HERC4-203ENST00000395185 ERVV-1B6SEH8 477 aa10.8□□□□□ -0.68
HERC4-203ENST00000395185 POLRMTO00411 1230 aaKnown RBP10.8□□□□□ -0.68
HERC4-203ENST00000395185 IPO8O15397 1037 aaKnown RBP10.8□□□□□ -0.68
HERC4-203ENST00000395185 PLIN1O60240 522 aa10.8□□□□□ -0.68
HERC4-203ENST00000395185 MYL6BP14649 208 aa10.8□□□□□ -0.68
HERC4-203ENST00000395185 YY1P25490 414 aa10.8□□□□□ -0.68
HERC4-203ENST00000395185 GTF2E1P29083 439 aaPredicted RBP10.8□□□□□ -0.68
HERC4-203ENST00000395185 PIP4K2AP48426 406 aaPredicted RBP10.8□□□□□ -0.68
HERC4-203ENST00000395185 C20orf194Q5TEA3 1177 aa10.8□□□□□ -0.68
HERC4-203ENST00000395185 TPTE2Q6XPS3 522 aa10.8□□□□□ -0.68
HERC4-203ENST00000395185 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.8□□□□□ -0.68
HERC4-203ENST00000395185 PIM2Q9P1W9 311 aa10.8□□□□□ -0.68
HERC4-203ENST00000395185 ZBTB47Q9UFB7 747 aaPredicted RBP10.8□□□□□ -0.68
HERC4-203ENST00000395185 NOB1Q9ULX3 412 aaKnown RBP10.8□□□□□ -0.68
HERC4-203ENST00000395185 KIF16BQ96L93 1317 aa10.8□□□□□ -0.68
HERC4-203ENST00000395185 CASZ1Q86V15 1759 aa10.8□□□□□ -0.68
HERC4-203ENST00000395185 A0A0G2JLW4 131 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 NBPF26B4DH59 902 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 H0YIN7 160 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 CAMTA2O94983 1202 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 MNX1P50219 401 aaPredicted RBP10.79□□□□□ -0.68
HERC4-203ENST00000395185 ST5P78524 1137 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 DDR1Q08345 913 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 HDGFL1Q5TGJ6 251 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 ZKSCAN2Q63HK3 967 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 TBC1D9BQ66K14 1250 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 NBPF10Q6P3W6 841 aaKnown RBP10.79□□□□□ -0.68
HERC4-203ENST00000395185 ATF7IPQ6VMQ6 1270 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 NBPF15Q8N660 670 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 BCL2L13Q9BXK5 485 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 BCL2L12Q9HB09 334 aa10.79□□□□□ -0.68
HERC4-203ENST00000395185 C19orf67A6NJJ6 358 aa10.78□□□□□ -0.68
HERC4-203ENST00000395185 TCERG1O14776 1098 aaKnown RBP10.78□□□□□ -0.68
HERC4-203ENST00000395185 RLBP1P12271 317 aa10.78□□□□□ -0.68
HERC4-203ENST00000395185 TRIM27P14373 513 aa10.78□□□□□ -0.68
HERC4-203ENST00000395185 DPEP1P16444 411 aa10.78□□□□□ -0.68
HERC4-203ENST00000395185 PDE6BP35913 854 aa10.78□□□□□ -0.68
HERC4-203ENST00000395185 VASPP50552 380 aaPredicted RBP10.78□□□□□ -0.68
HERC4-203ENST00000395185 G2E3Q7L622 706 aa10.78□□□□□ -0.68
HERC4-203ENST00000395185 NBPF5PQ86XG9 351 aaPredicted RBP10.78□□□□□ -0.68
HERC4-203ENST00000395185 BRIP1Q9BX63 1249 aa10.78□□□□□ -0.68
HERC4-203ENST00000395185 DDX21Q9NR30 783 aaKnown RBP eCLIP10.78□□□□□ -0.68
HERC4-203ENST00000395185 DBF4Q9UBU7 674 aaPredicted RBP10.78□□□□□ -0.68
HERC4-203ENST00000395185 NIP7Q9Y221 180 aaKnown RBP eCLIP10.78□□□□□ -0.68
HERC4-203ENST00000395185 C5P01031 1676 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms