RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 PIBF1Q8WXW3 757 aa12.02□□□□□ -0.48
UBE2D3-208ENST00000394803 SYT1P21579 422 aa12.02□□□□□ -0.49
UBE2D3-208ENST00000394803 DNTTIP2Q5QJE6 756 aaKnown RBP12.02□□□□□ -0.49
UBE2D3-208ENST00000394803 NECTIN2Q92692 538 aa12.02□□□□□ -0.49
UBE2D3-208ENST00000394803 EVI5LQ96CN4 794 aa12.02□□□□□ -0.49
UBE2D3-208ENST00000394803 ECHDC1Q9NTX5 307 aa12.02□□□□□ -0.49
UBE2D3-208ENST00000394803 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.02□□□□□ -0.494e-6■□□□□ 11
UBE2D3-208ENST00000394803 MARF1Q9Y4F3 1742 aaKnown RBP12.02□□□□□ -0.49
UBE2D3-208ENST00000394803 LMO7Q8WWI1 1683 aa12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 BEND3Q5T5X7 828 aa12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 KCNB2Q92953 911 aa12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 PDRG1Q9NUG6 133 aa12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 CCDC171Q6TFL3 1326 aa12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 GADD45BO75293 160 aaPredicted RBP12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 CASTP20810 708 aaKnown RBP12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 EIF4A1P60842 406 aaKnown RBP12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 RNF20Q5VTR2 975 aa12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 THEMISQ8N1K5 641 aaPredicted RBP12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 DBF4Q9UBU7 674 aaPredicted RBP12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 CNPY2Q9Y2B0 182 aa12.01□□□□□ -0.49
UBE2D3-208ENST00000394803 KDM4AO75164 1064 aa12□□□□□ -0.49
UBE2D3-208ENST00000394803 CCDC192P0DO97 292 aa12□□□□□ -0.49
UBE2D3-208ENST00000394803 TEFQ10587 303 aa12□□□□□ -0.49
UBE2D3-208ENST00000394803 CWC27Q6UX04 472 aaKnown RBP12□□□□□ -0.49
UBE2D3-208ENST00000394803 RUFY3Q7L099 469 aa12□□□□□ -0.49
UBE2D3-208ENST00000394803 ABTB2Q8N961 1025 aa12□□□□□ -0.49
UBE2D3-208ENST00000394803 MYRIPQ8NFW9 859 aa12□□□□□ -0.49
UBE2D3-208ENST00000394803 SLC26A8Q96RN1 970 aa12□□□□□ -0.49
UBE2D3-208ENST00000394803 ZSWIM6Q9HCJ5 1215 aa12□□□□□ -0.49
UBE2D3-208ENST00000394803 FAM13BQ9NYF5 915 aa12□□□□□ -0.49
UBE2D3-208ENST00000394803 USP25Q9UHP3 1055 aa12□□□□□ -0.49
UBE2D3-208ENST00000394803 LTN1O94822 1766 aa12□□□□□ -0.49
UBE2D3-208ENST00000394803 PHRF1Q9P1Y6 1649 aaKnown RBP12□□□□□ -0.49
UBE2D3-208ENST00000394803 ADCY5O95622 1261 aa11.99□□□□□ -0.49
UBE2D3-208ENST00000394803 CHAF1AQ13111 956 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-208ENST00000394803 AMOTQ4VCS5 1084 aa11.99□□□□□ -0.49
UBE2D3-208ENST00000394803 PHAXQ9H814 394 aaKnown RBP11.99□□□□□ -0.49
UBE2D3-208ENST00000394803 HYPKQ9NX55 129 aa11.99□□□□□ -0.49
UBE2D3-208ENST00000394803 KRT85P78386 507 aa11.99□□□□□ -0.49
UBE2D3-208ENST00000394803 PLEKHO1Q53GL0 409 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-208ENST00000394803 AKAP4Q5JQC9 854 aa11.99□□□□□ -0.49
UBE2D3-208ENST00000394803 KCNH5Q8NCM2 988 aa11.99□□□□□ -0.49
UBE2D3-208ENST00000394803 IP6K1Q92551 441 aa11.99□□□□□ -0.49
UBE2D3-208ENST00000394803 ELP1O95163 1332 aa11.99□□□□□ -0.49
UBE2D3-208ENST00000394803 PI4KAP2A4QPH2 592 aa11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 DDX58O95786 925 aaKnown RBP11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 GJB2P29033 226 aa11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 TCHHQ07283 1943 aa11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 PI4KAP1Q8N8J0 262 aa11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 CHAMP1Q96JM3 812 aa11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 JAKMIP1Q96N16 626 aaKnown RBP11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 ALDH8A1Q9H2A2 487 aaPredicted RBP11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 GDPD2Q9HCC8 539 aa11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 C9orf78Q9NZ63 289 aaPredicted RBP11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 FIBPO43427 364 aa11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 KCNJ4P48050 445 aa11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 NOLC1Q14978 699 aaKnown RBP eCLIP11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 HMG20BQ9P0W2 317 aa11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 CHPF2Q9P2E5 772 aa11.98□□□□□ -0.49
UBE2D3-208ENST00000394803 LMTK3Q96Q04 1460 aa11.97□□□□□ -0.49
UBE2D3-208ENST00000394803 MAP4K4O95819 1239 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-208ENST00000394803 NBPF7P0C2Y1 421 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-208ENST00000394803 GTF2F1P35269 517 aaKnown RBP eCLIP11.97□□□□□ -0.497e-7■■■□□ 15.7
UBE2D3-208ENST00000394803 SCAND2PQ9GZW5 306 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-208ENST00000394803 SPTLC3Q9NUV7 552 aa11.97□□□□□ -0.49
UBE2D3-208ENST00000394803 MTMR6Q9Y217 621 aa11.97□□□□□ -0.49
UBE2D3-208ENST00000394803 BTBD11A6QL63 1104 aa11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 HCLS1P14317 486 aaPredicted RBP11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 FOXD4L6Q3SYB3 417 aaPredicted RBP11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 FOXD4L3Q6VB84 417 aaPredicted RBP11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 RASEFQ8IZ41 740 aa11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 IL25Q9H293 177 aa11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 SNRKQ9NRH2 765 aa11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 CAVIN2O95810 425 aa11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 RBM10P98175 930 aaKnown RBP11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 KRT32Q14532 448 aa11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 C1orf141Q5JVX7 400 aa11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 KSR2Q6VAB6 950 aa11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 CCDC83Q8IWF9 413 aa11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 SPG7Q9UQ90 795 aa11.96□□□□□ -0.49
UBE2D3-208ENST00000394803 ADCY9O60503 1353 aa11.96□□□□□ -0.5
UBE2D3-208ENST00000394803 GOLGA6L4A6NEF3 574 aa11.95□□□□□ -0.5
UBE2D3-208ENST00000394803 G3BP1Q13283 466 aaKnown RBP eCLIP11.95□□□□□ -0.5
UBE2D3-208ENST00000394803 NECTIN1Q15223 517 aa11.95□□□□□ -0.5
UBE2D3-208ENST00000394803 PRPF40BQ6NWY9 871 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-208ENST00000394803 LTV1Q96GA3 475 aaPredicted RBP11.95□□□□□ -0.5
UBE2D3-208ENST00000394803 FUCA2Q9BTY2 467 aa11.95□□□□□ -0.5
UBE2D3-208ENST00000394803 ADAMTSL3P82987 1691 aa11.95□□□□□ -0.5
UBE2D3-208ENST00000394803 MAP3K11Q16584 847 aa11.95□□□□□ -0.5
UBE2D3-208ENST00000394803 LARP1BQ659C4 914 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-208ENST00000394803 ZMYND15Q9H091 742 aa11.95□□□□□ -0.5
UBE2D3-208ENST00000394803 DDX19AQ9NUU7 478 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-208ENST00000394803 VPS37CA5D8V6 355 aaPredicted RBP11.94□□□□□ -0.5
UBE2D3-208ENST00000394803 BLOC1S2Q6QNY1 142 aa11.94□□□□□ -0.5
UBE2D3-208ENST00000394803 LINS1Q8NG48 757 aa11.94□□□□□ -0.5
UBE2D3-208ENST00000394803 FAM200AQ8TCP9 573 aa11.94□□□□□ -0.5
UBE2D3-208ENST00000394803 MAP4K1Q92918 833 aa11.94□□□□□ -0.5
UBE2D3-208ENST00000394803 CHMP4CQ96CF2 233 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms