RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 GADD45BO75293 160 aaPredicted RBP22.17■■□□□ 1.14
PCDHA1-202ENST00000394633 LMO7Q8WWI1 1683 aa22.17■■□□□ 1.14
PCDHA1-202ENST00000394633 FOXD4L6Q3SYB3 417 aaPredicted RBP22.16■■□□□ 1.14
PCDHA1-202ENST00000394633 FOXD4L3Q6VB84 417 aaPredicted RBP22.16■■□□□ 1.14
PCDHA1-202ENST00000394633 RHPN1Q8TCX5 695 aa22.16■■□□□ 1.14
PCDHA1-202ENST00000394633 TSPY26PQ9H489 355 aa22.16■■□□□ 1.14
PCDHA1-202ENST00000394633 GDPD2Q9HCC8 539 aa22.16■■□□□ 1.14
PCDHA1-202ENST00000394633 RPAP1Q9BWH6 1393 aaPredicted RBP22.16■■□□□ 1.14
PCDHA1-202ENST00000394633 RAD50Q92878 1312 aa22.16■■□□□ 1.14
PCDHA1-202ENST00000394633 WDR33Q9C0J8 1336 aaKnown RBP22.16■■□□□ 1.14
PCDHA1-202ENST00000394633 AEBP2Q6ZN18 517 aaPredicted RBP22.15■■□□□ 1.14
PCDHA1-202ENST00000394633 KDM3BQ7LBC6 1761 aa22.15■■□□□ 1.14
PCDHA1-202ENST00000394633 SGSM2O43147 1006 aa22.15■■□□□ 1.14
PCDHA1-202ENST00000394633 TERF1P54274 439 aa22.15■■□□□ 1.14
PCDHA1-202ENST00000394633 USP48Q86UV5 1035 aa22.15■■□□□ 1.14
PCDHA1-202ENST00000394633 SYAP1Q96A49 352 aaPredicted RBP22.15■■□□□ 1.14
PCDHA1-202ENST00000394633 PRDM11Q9NQV5 511 aa22.15■■□□□ 1.14
PCDHA1-202ENST00000394633 CCDC39Q9UFE4 941 aa22.14■■□□□ 1.14
PCDHA1-202ENST00000394633 SNX14Q9Y5W7 946 aa22.14■■□□□ 1.14
PCDHA1-202ENST00000394633 PIP4K2BP78356 416 aa22.14■■□□□ 1.13
PCDHA1-202ENST00000394633 KIF1BPQ96EK5 621 aa22.13■■□□□ 1.13
PCDHA1-202ENST00000394633 TTC14Q96N46 770 aa22.13■■□□□ 1.13
PCDHA1-202ENST00000394633 LSG1Q9H089 658 aaKnown RBP22.13■■□□□ 1.13
PCDHA1-202ENST00000394633 ABCC6O95255 1503 aa22.13■■□□□ 1.13
PCDHA1-202ENST00000394633 SRGAP3O43295 1099 aa22.12■■□□□ 1.13
PCDHA1-202ENST00000394633 NBPF7P0C2Y1 421 aaPredicted RBP22.12■■□□□ 1.13
PCDHA1-202ENST00000394633 MCM5P33992 734 aa22.12■■□□□ 1.13
PCDHA1-202ENST00000394633 NLRP2Q9NX02 1062 aa22.12■■□□□ 1.13
PCDHA1-202ENST00000394633 R3HCC1Q9Y3T6 440 aaKnown RBP22.12■■□□□ 1.13
PCDHA1-202ENST00000394633 CEMIPQ8WUJ3 1361 aa22.12■■□□□ 1.13
PCDHA1-202ENST00000394633 EIF2S2P20042 333 aaKnown RBP22.11■■□□□ 1.13
PCDHA1-202ENST00000394633 GLIPR1L2Q4G1C9 344 aa22.11■■□□□ 1.13
PCDHA1-202ENST00000394633 RASEFQ8IZ41 740 aa22.11■■□□□ 1.13
PCDHA1-202ENST00000394633 COL16A1Q07092 1604 aaPredicted RBP22.1■■□□□ 1.13
PCDHA1-202ENST00000394633 CNTROBQ8N137 903 aa22.1■■□□□ 1.13
PCDHA1-202ENST00000394633 TMEM87AQ8NBN3 555 aa22.1■■□□□ 1.13
PCDHA1-202ENST00000394633 PHLPP1O60346 1717 aa22.1■■□□□ 1.13
PCDHA1-202ENST00000394633 CSB-PGBD3P0DP91 1061 aa22.1■■□□□ 1.13
PCDHA1-202ENST00000394633 AK2P54819 239 aa22.1■■□□□ 1.13
PCDHA1-202ENST00000394633 EIF4A1P60842 406 aaKnown RBP22.1■■□□□ 1.13
PCDHA1-202ENST00000394633 BEND3Q5T5X7 828 aa22.1■■□□□ 1.13
PCDHA1-202ENST00000394633 PHF14O94880 888 aa22.09■■□□□ 1.13
PCDHA1-202ENST00000394633 CHPF2Q9P2E5 772 aa22.09■■□□□ 1.13
PCDHA1-202ENST00000394633 RUFY3Q7L099 469 aa22.08■■□□□ 1.13
PCDHA1-202ENST00000394633 DNAAF4Q8WXU2 420 aa22.08■■□□□ 1.13
PCDHA1-202ENST00000394633 CNPY2Q9Y2B0 182 aa22.08■■□□□ 1.13
PCDHA1-202ENST00000394633 COL5A2P05997 1499 aaPredicted RBP22.08■■□□□ 1.12
PCDHA1-202ENST00000394633 MEGF6O75095 1541 aa22.08■■□□□ 1.12
PCDHA1-202ENST00000394633 LARP6Q9BRS8 491 aaKnown RBP22.07■■□□□ 1.12
PCDHA1-202ENST00000394633 LGR6Q9HBX8 967 aa22.07■■□□□ 1.12
PCDHA1-202ENST00000394633 USP42Q9H9J4 1324 aaKnown RBP22.07■■□□□ 1.12
PCDHA1-202ENST00000394633 PI4KAP2A4QPH2 592 aa22.07■■□□□ 1.12
PCDHA1-202ENST00000394633 TOM1O60784 492 aa22.07■■□□□ 1.12
PCDHA1-202ENST00000394633 ZSCAN22P10073 491 aaPredicted RBP22.07■■□□□ 1.12
PCDHA1-202ENST00000394633 CWC27Q6UX04 472 aaKnown RBP22.07■■□□□ 1.12
PCDHA1-202ENST00000394633 PI4KAP1Q8N8J0 262 aa22.07■■□□□ 1.12
PCDHA1-202ENST00000394633 LIMCH1Q9UPQ0 1083 aa22.06■■□□□ 1.12
PCDHA1-202ENST00000394633 SPG7Q9UQ90 795 aa22.06■■□□□ 1.12
PCDHA1-202ENST00000394633 COL22A1Q8NFW1 1626 aaPredicted RBP22.06■■□□□ 1.12
PCDHA1-202ENST00000394633 CSPP1Q1MSJ5 1256 aa22.06■■□□□ 1.12
PCDHA1-202ENST00000394633 UBAP1LF5GYI3 381 aa22.05■■□□□ 1.12
PCDHA1-202ENST00000394633 KCNQ3O43525 872 aa22.05■■□□□ 1.12
PCDHA1-202ENST00000394633 HOXB7P09629 217 aa22.05■■□□□ 1.12
PCDHA1-202ENST00000394633 ADCY9O60503 1353 aa22.05■■□□□ 1.12
PCDHA1-202ENST00000394633 STX6O43752 255 aa22.04■■□□□ 1.12
PCDHA1-202ENST00000394633 SYT1P21579 422 aa22.04■■□□□ 1.12
PCDHA1-202ENST00000394633 HSP90AB4PQ58FF6 505 aa22.04■■□□□ 1.12
PCDHA1-202ENST00000394633 CCDC183Q5T5S1 534 aa22.04■■□□□ 1.12
PCDHA1-202ENST00000394633 PDCL3Q9H2J4 239 aa22.04■■□□□ 1.12
PCDHA1-202ENST00000394633 TTC41PQ6P2S7 1318 aa22.04■■□□□ 1.12
PCDHA1-202ENST00000394633 ANXA1P04083 346 aa22.04■■□□□ 1.12
PCDHA1-202ENST00000394633 CPA1P15085 419 aa22.04■■□□□ 1.12
PCDHA1-202ENST00000394633 ZNF530Q6P9A1 599 aaPredicted RBP22.04■■□□□ 1.12
PCDHA1-202ENST00000394633 LARGE1O95461 756 aa22.03■■□□□ 1.12
PCDHA1-202ENST00000394633 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.03■■□□□ 1.12
PCDHA1-202ENST00000394633 WDR17Q8IZU2 1322 aa22.03■■□□□ 1.12
PCDHA1-202ENST00000394633 GLRX3O76003 335 aaKnown RBP22.03■■□□□ 1.12
PCDHA1-202ENST00000394633 PTMAP06454 111 aaKnown RBP22.03■■□□□ 1.12
PCDHA1-202ENST00000394633 F13A1P00488 732 aa22.02■■□□□ 1.12
PCDHA1-202ENST00000394633 CASTP20810 708 aaKnown RBP22.02■■□□□ 1.12
PCDHA1-202ENST00000394633 UVSSAQ2YD98 709 aa22.02■■□□□ 1.12
PCDHA1-202ENST00000394633 FAM184AQ8NB25 1140 aa22.02■■□□□ 1.12
PCDHA1-202ENST00000394633 SMC3Q9UQE7 1217 aa22.02■■□□□ 1.12
PCDHA1-202ENST00000394633 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.02■■□□□ 1.12
PCDHA1-202ENST00000394633 PLEKHO1Q53GL0 409 aaPredicted RBP22.02■■□□□ 1.11
PCDHA1-202ENST00000394633 STRN4Q9NRL3 753 aa22.02■■□□□ 1.11
PCDHA1-202ENST00000394633 UQCRHLA0A096LP55 91 aa22.01■■□□□ 1.11
PCDHA1-202ENST00000394633 UQCRHP07919 91 aa22.01■■□□□ 1.11
PCDHA1-202ENST00000394633 PTH1RQ03431 593 aa22.01■■□□□ 1.11
PCDHA1-202ENST00000394633 OS9Q13438 667 aaPredicted RBP22.01■■□□□ 1.11
PCDHA1-202ENST00000394633 HYPKQ9NX55 129 aa22.01■■□□□ 1.11
PCDHA1-202ENST00000394633 UBE2HP62256 183 aa22■■□□□ 1.11
PCDHA1-202ENST00000394633 RBM10P98175 930 aaKnown RBP22■■□□□ 1.11
PCDHA1-202ENST00000394633 MTX1Q13505 466 aa22■■□□□ 1.11
PCDHA1-202ENST00000394633 MPRIPQ6WCQ1 1025 aa22■■□□□ 1.11
PCDHA1-202ENST00000394633 RAPGEF4Q8WZA2 1011 aa22■■□□□ 1.11
PCDHA1-202ENST00000394633 DIAPH3Q9NSV4 1193 aa22■■□□□ 1.11
PCDHA1-202ENST00000394633 AMOTQ4VCS5 1084 aa22■■□□□ 1.11
PCDHA1-202ENST00000394633 LARP1Q6PKG0 1096 aaKnown RBP22■■□□□ 1.11
PCDHA1-202ENST00000394633 TOM1L2Q6ZVM7 507 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms