RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 LIG1P18858 919 aa18.7■□□□□ 0.58
TFAP2B-202ENST00000393655 CCDC178Q5BJE1 867 aa18.7■□□□□ 0.58
TFAP2B-202ENST00000393655 FBXO31Q5XUX0 539 aaPredicted RBP18.7■□□□□ 0.58
TFAP2B-202ENST00000393655 TSPY2A6NKD2 308 aa18.7■□□□□ 0.58
TFAP2B-202ENST00000393655 BACH2Q9BYV9 841 aa18.7■□□□□ 0.58
TFAP2B-202ENST00000393655 LRRC27Q9C0I9 530 aa18.7■□□□□ 0.58
TFAP2B-202ENST00000393655 TCP11L1Q9NUJ3 509 aa18.7■□□□□ 0.58
TFAP2B-202ENST00000393655 ZGPATQ8N5A5 531 aaKnown RBP18.69■□□□□ 0.58
TFAP2B-202ENST00000393655 PIK3R4Q99570 1358 aa18.69■□□□□ 0.58
TFAP2B-202ENST00000393655 ZSCAN12O43309 604 aa18.69■□□□□ 0.58
TFAP2B-202ENST00000393655 FLIIQ13045 1269 aa18.69■□□□□ 0.58
TFAP2B-202ENST00000393655 KLHL10Q6JEL2 608 aa18.68■□□□□ 0.58
TFAP2B-202ENST00000393655 SSH1Q8WYL5 1049 aa18.68■□□□□ 0.58
TFAP2B-202ENST00000393655 SMARCC1Q92922 1105 aaPredicted RBP18.68■□□□□ 0.58
TFAP2B-202ENST00000393655 F6X3S4 739 aa18.68■□□□□ 0.58
TFAP2B-202ENST00000393655 GBP3Q9H0R5 595 aa18.68■□□□□ 0.58
TFAP2B-202ENST00000393655 CTAGE5O15320 804 aa18.68■□□□□ 0.58
TFAP2B-202ENST00000393655 TMEM67Q5HYA8 995 aa18.68■□□□□ 0.58
TFAP2B-202ENST00000393655 MFSD6Q6ZSS7 791 aa18.68■□□□□ 0.58
TFAP2B-202ENST00000393655 CCDC82Q8N4S0 544 aa18.68■□□□□ 0.58
TFAP2B-202ENST00000393655 GRPEL1Q9HAV7 217 aa18.68■□□□□ 0.58
TFAP2B-202ENST00000393655 FERMT3Q86UX7 667 aa18.67■□□□□ 0.58
TFAP2B-202ENST00000393655 KIF2AO00139 706 aaPredicted RBP18.67■□□□□ 0.58
TFAP2B-202ENST00000393655 CAMK4Q16566 473 aa18.67■□□□□ 0.58
TFAP2B-202ENST00000393655 TNRQ92752 1358 aa18.67■□□□□ 0.58
TFAP2B-202ENST00000393655 ECHDC1Q9NTX5 307 aa18.66■□□□□ 0.58
TFAP2B-202ENST00000393655 GOLIM4O00461 696 aa18.66■□□□□ 0.58
TFAP2B-202ENST00000393655 USO1O60763 962 aaKnown RBP18.66■□□□□ 0.58
TFAP2B-202ENST00000393655 RARSP54136 660 aaKnown RBP18.66■□□□□ 0.58
TFAP2B-202ENST00000393655 SAMM50Q9Y512 469 aa18.66■□□□□ 0.58
TFAP2B-202ENST00000393655 IDI1Q13907 227 aa18.66■□□□□ 0.58
TFAP2B-202ENST00000393655 CNNM3Q8NE01 707 aa18.66■□□□□ 0.58
TFAP2B-202ENST00000393655 NKTRP30414 1462 aaKnown RBP18.66■□□□□ 0.58
TFAP2B-202ENST00000393655 SFPQP23246 707 aaKnown RBP eCLIP18.66■□□□□ 0.58
TFAP2B-202ENST00000393655 HOOK3Q86VS8 718 aa18.66■□□□□ 0.58
TFAP2B-202ENST00000393655 SETDB2Q96T68 719 aa18.66■□□□□ 0.58
TFAP2B-202ENST00000393655 UBAP1LF5GYI3 381 aa18.65■□□□□ 0.58
TFAP2B-202ENST00000393655 FAM114A1Q8IWE2 563 aa18.65■□□□□ 0.58
TFAP2B-202ENST00000393655 KIF5CO60282 957 aa18.65■□□□□ 0.58
TFAP2B-202ENST00000393655 LIMCH1Q9UPQ0 1083 aa18.65■□□□□ 0.58
TFAP2B-202ENST00000393655 IARSP41252 1262 aaKnown RBP18.65■□□□□ 0.58
TFAP2B-202ENST00000393655 CUL7Q14999 1698 aa18.65■□□□□ 0.58
TFAP2B-202ENST00000393655 YEATS4O95619 227 aa18.64■□□□□ 0.58
TFAP2B-202ENST00000393655 CTNNA2P26232 953 aa18.64■□□□□ 0.58
TFAP2B-202ENST00000393655 VAT1LQ9HCJ6 419 aa18.64■□□□□ 0.58
TFAP2B-202ENST00000393655 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 SYCP3Q8IZU3 236 aa18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 TOP1P11387 765 aaKnown RBP18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 CCDC183Q5T5S1 534 aa18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 ZCRB1Q8TBF4 217 aaKnown RBP18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 FERMT1Q9BQL6 677 aa18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 PLCD4Q9BRC7 762 aa18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 MCM3P25205 808 aa18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 CCDC40Q4G0X9 1142 aa18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 NCOA7Q8NI08 942 aa18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 CTNNBL1Q8WYA6 563 aaPredicted RBP18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 GUCY1B3Q02153 619 aa18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 ADGRF5Q8IZF2 1346 aa18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 NOS1P29475 1434 aa18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 ABCA10Q8WWZ4 1543 aa18.64■□□□□ 0.57
TFAP2B-202ENST00000393655 ERMNQ8TAM6 284 aa18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 CCDC102AQ96A19 550 aa18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 GSTTP1A0A1W2PQM5 241 aa18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 ATP5J2-PTCD1G3V325 749 aa18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 NF2P35240 595 aa18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 NPHP3Q7Z494 1330 aa18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 SCAF11Q99590 1463 aaKnown RBP18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 POLD1P28340 1107 aa18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 ATP6V1AP38606 617 aa18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 MTIF2P46199 727 aaKnown RBP18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 TDRD12Q587J7 1177 aaKnown RBP18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 OGFOD1Q8N543 542 aa18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 ACEP12821 1306 aa18.63■□□□□ 0.57
TFAP2B-202ENST00000393655 STAMBPO95630 424 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 LUZP1Q86V48 1076 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 NUP88Q99567 741 aaPredicted RBP18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 TAF3Q5VWG9 929 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 FANCAO15360 1455 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 UBE3BQ7Z3V4 1068 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 HMG20BQ9P0W2 317 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 CLEC11AQ9Y240 323 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 DYDC1Q8WWB3 177 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 NYXQ9GZU5 481 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 USP16Q9Y5T5 823 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 CASQ1P31415 396 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 METAP2P50579 478 aaKnown RBP eCLIP18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 CHRNA2Q15822 529 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 MAP9Q49MG5 647 aa18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 DHX29Q7Z478 1369 aaKnown RBP18.62■□□□□ 0.57
TFAP2B-202ENST00000393655 TBCAO75347 108 aaKnown RBP18.61■□□□□ 0.57
TFAP2B-202ENST00000393655 KANK3Q6NY19 840 aa18.61■□□□□ 0.57
TFAP2B-202ENST00000393655 C16orf71Q8IYS4 520 aaPredicted RBP18.61■□□□□ 0.57
TFAP2B-202ENST00000393655 BICD1Q96G01 975 aa18.61■□□□□ 0.57
TFAP2B-202ENST00000393655 CRACR2AQ9BSW2 395 aa18.61■□□□□ 0.57
TFAP2B-202ENST00000393655 ABCC5O15440 1437 aa18.61■□□□□ 0.57
TFAP2B-202ENST00000393655 PTPN23Q9H3S7 1636 aa18.61■□□□□ 0.57
TFAP2B-202ENST00000393655 PABPN1LA6NDY0 278 aaKnown RBP18.61■□□□□ 0.57
TFAP2B-202ENST00000393655 ZNF804AQ7Z570 1209 aa18.61■□□□□ 0.57
TFAP2B-202ENST00000393655 B4DLN1 442 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms