RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 NPM2Q86SE8 214 aaKnown RBP10.01□□□□□ -0.81
HMGB3P1-201ENST00000393368 CFAP44Q96MT7 982 aa10.01□□□□□ -0.81
HMGB3P1-201ENST00000393368 KIAA1551Q9HCM1 1747 aa10□□□□□ -0.81
HMGB3P1-201ENST00000393368 A0A0G2JLW4 131 aa10□□□□□ -0.81
HMGB3P1-201ENST00000393368 SERPINB2P05120 415 aa10□□□□□ -0.81
HMGB3P1-201ENST00000393368 ZNF853P0CG23 659 aa10□□□□□ -0.81
HMGB3P1-201ENST00000393368 DPEP1P16444 411 aa10□□□□□ -0.81
HMGB3P1-201ENST00000393368 HLFQ16534 295 aa10□□□□□ -0.81
HMGB3P1-201ENST00000393368 TSR2Q969E8 191 aaKnown RBP10□□□□□ -0.81
HMGB3P1-201ENST00000393368 BABAM1Q9NWV8 329 aa10□□□□□ -0.81
HMGB3P1-201ENST00000393368 BCORQ6W2J9 1755 aa10□□□□□ -0.81
HMGB3P1-201ENST00000393368 ELL2O00472 640 aaPredicted RBP9.99□□□□□ -0.81
HMGB3P1-201ENST00000393368 CHRNA5P30532 468 aa9.99□□□□□ -0.81
HMGB3P1-201ENST00000393368 PDIA6Q15084 440 aa9.99□□□□□ -0.81
HMGB3P1-201ENST00000393368 WWC1Q8IX03 1113 aa9.99□□□□□ -0.81
HMGB3P1-201ENST00000393368 ZBTB3Q9H5J0 574 aa9.99□□□□□ -0.81
HMGB3P1-201ENST00000393368 IFT57Q9NWB7 429 aa9.99□□□□□ -0.81
HMGB3P1-201ENST00000393368 FAM177BA6PVY3 158 aa9.98□□□□□ -0.81
HMGB3P1-201ENST00000393368 GNAI1P63096 354 aa9.98□□□□□ -0.81
HMGB3P1-201ENST00000393368 HDGFL1Q5TGJ6 251 aa9.98□□□□□ -0.81
HMGB3P1-201ENST00000393368 DUSP27Q5VZP5 1158 aa9.98□□□□□ -0.81
HMGB3P1-201ENST00000393368 LRP10Q7Z4F1 713 aa9.98□□□□□ -0.81
HMGB3P1-201ENST00000393368 CHPF2Q9P2E5 772 aa9.98□□□□□ -0.81
HMGB3P1-201ENST00000393368 N4BP2Q86UW6 1770 aaPredicted RBP9.98□□□□□ -0.81
HMGB3P1-201ENST00000393368 KCNA3P22001 575 aa9.97□□□□□ -0.81
HMGB3P1-201ENST00000393368 CALD1Q05682 793 aaKnown RBP9.97□□□□□ -0.81
HMGB3P1-201ENST00000393368 AIMP1Q12904 312 aaKnown RBP9.97□□□□□ -0.81
HMGB3P1-201ENST00000393368 PRR5LQ6MZQ0 368 aa9.97□□□□□ -0.81
HMGB3P1-201ENST00000393368 KIF6Q6ZMV9 814 aa9.97□□□□□ -0.81
HMGB3P1-201ENST00000393368 C8orf58Q8NAV2 365 aa9.97□□□□□ -0.81
HMGB3P1-201ENST00000393368 ZNF428Q96B54 188 aa9.97□□□□□ -0.81
HMGB3P1-201ENST00000393368 SETDB2Q96T68 719 aa9.97□□□□□ -0.81
HMGB3P1-201ENST00000393368 ZNF219Q9P2Y4 722 aaPredicted RBP9.97□□□□□ -0.81
HMGB3P1-201ENST00000393368 NIP7Q9Y221 180 aaKnown RBP eCLIP9.97□□□□□ -0.81
HMGB3P1-201ENST00000393368 NRXN2Q9P2S2 1712 aa9.96□□□□□ -0.81
HMGB3P1-201ENST00000393368 AFDNP55196 1824 aaKnown RBP9.96□□□□□ -0.81
HMGB3P1-201ENST00000393368 KIF13BQ9NQT8 1826 aa9.96□□□□□ -0.81
HMGB3P1-201ENST00000393368 GPTP24298 496 aa9.96□□□□□ -0.82
HMGB3P1-201ENST00000393368 TGFB2P61812 414 aa9.96□□□□□ -0.82
HMGB3P1-201ENST00000393368 CCDC27Q2M243 656 aa9.96□□□□□ -0.82
HMGB3P1-201ENST00000393368 TSPYL6Q8N831 410 aa9.96□□□□□ -0.82
HMGB3P1-201ENST00000393368 XAGE3Q8WTP9 111 aa9.96□□□□□ -0.82
HMGB3P1-201ENST00000393368 BCS1LQ9Y276 419 aa9.96□□□□□ -0.82
HMGB3P1-201ENST00000393368 ZNF652Q9Y2D9 606 aa9.96□□□□□ -0.82
HMGB3P1-201ENST00000393368 ERBB4Q15303 1308 aa9.96□□□□□ -0.82
HMGB3P1-201ENST00000393368 MAP3K15Q6ZN16 1313 aa9.96□□□□□ -0.82
HMGB3P1-201ENST00000393368 TCERG1O14776 1098 aaKnown RBP9.95□□□□□ -0.82
HMGB3P1-201ENST00000393368 NPHP1O15259 732 aa9.95□□□□□ -0.82
HMGB3P1-201ENST00000393368 YY1P25490 414 aa9.95□□□□□ -0.82
HMGB3P1-201ENST00000393368 DIEXFQ68CQ4 756 aaKnown RBP9.95□□□□□ -0.82
HMGB3P1-201ENST00000393368 COPS6Q7L5N1 327 aa9.95□□□□□ -0.82
HMGB3P1-201ENST00000393368 NBPF5PQ86XG9 351 aaPredicted RBP9.95□□□□□ -0.82
HMGB3P1-201ENST00000393368 CNBD1Q8NA66 436 aa9.95□□□□□ -0.82
HMGB3P1-201ENST00000393368 UBN2Q6ZU65 1347 aa9.95□□□□□ -0.82
HMGB3P1-201ENST00000393368 FANCIQ9NVI1 1328 aa9.95□□□□□ -0.82
HMGB3P1-201ENST00000393368 HOXB7P09629 217 aa9.94□□□□□ -0.82
HMGB3P1-201ENST00000393368 CLEC4GQ6UXB4 293 aa9.94□□□□□ -0.82
HMGB3P1-201ENST00000393368 NUTM1Q86Y26 1132 aa9.94□□□□□ -0.82
HMGB3P1-201ENST00000393368 C2CD5Q86YS7 1000 aa9.94□□□□□ -0.82
HMGB3P1-201ENST00000393368 MIER1Q8N108 512 aa9.94□□□□□ -0.82
HMGB3P1-201ENST00000393368 DDX21Q9NR30 783 aaKnown RBP eCLIP9.94□□□□□ -0.82
HMGB3P1-201ENST00000393368 ATP10DQ9P241 1426 aa9.93□□□□□ -0.82
HMGB3P1-201ENST00000393368 ABCC12Q96J65 1359 aa9.93□□□□□ -0.82
HMGB3P1-201ENST00000393368 ERVV-1B6SEH8 477 aa9.93□□□□□ -0.82
HMGB3P1-201ENST00000393368 ST5P78524 1137 aa9.93□□□□□ -0.82
HMGB3P1-201ENST00000393368 COL11A2P13942 1736 aaPredicted RBP9.93□□□□□ -0.82
HMGB3P1-201ENST00000393368 ANKRD31Q8N7Z5 1873 aa9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 IL16Q14005 1332 aa9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 CCER2I3L3R5 266 aa9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 GRIN3BO60391 1043 aa9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 ERFEQ4G0M1 354 aa9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 DALRD3Q5D0E6 543 aaKnown RBP9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 SUSD4Q5VX71 490 aa9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 GIGYF2Q6Y7W6 1299 aaKnown RBP9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 ZNF34Q8IZ26 560 aa9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 BRIP1Q9BX63 1249 aa9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 PHAXQ9H814 394 aaKnown RBP9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 PIM2Q9P1W9 311 aa9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 DBF4Q9UBU7 674 aaPredicted RBP9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 TNRC6CQ9HCJ0 1690 aaKnown RBP9.92□□□□□ -0.82
HMGB3P1-201ENST00000393368 H0YIN7 160 aa9.91□□□□□ -0.82
HMGB3P1-201ENST00000393368 RGL2O15211 777 aa9.91□□□□□ -0.82
HMGB3P1-201ENST00000393368 EXOSC9Q06265 439 aaKnown RBP9.91□□□□□ -0.82
HMGB3P1-201ENST00000393368 TWISTNBQ3B726 338 aaPredicted RBP9.91□□□□□ -0.82
HMGB3P1-201ENST00000393368 ARHGAP27Q6ZUM4 889 aa9.91□□□□□ -0.82
HMGB3P1-201ENST00000393368 WDR63Q8IWG1 891 aa9.91□□□□□ -0.82
HMGB3P1-201ENST00000393368 ZNF622Q969S3 477 aaKnown RBP eCLIP9.91□□□□□ -0.82
HMGB3P1-201ENST00000393368 ZNF521Q96K83 1311 aa9.9□□□□□ -0.82
HMGB3P1-201ENST00000393368 BRCA1P38398 1863 aaKnown RBP9.9□□□□□ -0.82
HMGB3P1-201ENST00000393368 ATP5J2-PTCD1G3V325 749 aa9.9□□□□□ -0.82
HMGB3P1-201ENST00000393368 NTSR2O95665 410 aa9.9□□□□□ -0.82
HMGB3P1-201ENST00000393368 GTF2E1P29083 439 aaPredicted RBP9.9□□□□□ -0.82
HMGB3P1-201ENST00000393368 PDE6BP35913 854 aa9.9□□□□□ -0.82
HMGB3P1-201ENST00000393368 TPTE2Q6XPS3 522 aa9.9□□□□□ -0.82
HMGB3P1-201ENST00000393368 C3orf67Q6ZVT6 689 aa9.9□□□□□ -0.82
HMGB3P1-201ENST00000393368 G2E3Q7L622 706 aa9.9□□□□□ -0.82
HMGB3P1-201ENST00000393368 SYNE4Q8N205 404 aa9.9□□□□□ -0.82
HMGB3P1-201ENST00000393368 HYPKQ9NX55 129 aa9.9□□□□□ -0.82
HMGB3P1-201ENST00000393368 NUP98P52948 1817 aa9.89□□□□□ -0.83
HMGB3P1-201ENST00000393368 RASSF7Q02833 373 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms