RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 CNBD1Q8NA66 436 aa16.41■□□□□ 0.22
CTSC-202ENST00000393301 CACNA1SQ13698 1873 aa16.41■□□□□ 0.22
CTSC-202ENST00000393301 PRAMEF22A3QJZ6 481 aa16.4■□□□□ 0.22
CTSC-202ENST00000393301 GLTPD2A6NH11 291 aa16.4■□□□□ 0.22
CTSC-202ENST00000393301 SRGNP10124 158 aa16.4■□□□□ 0.22
CTSC-202ENST00000393301 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
CTSC-202ENST00000393301 PNISRQ8TF01 805 aaKnown RBP16.4■□□□□ 0.22
CTSC-202ENST00000393301 ZNF652Q9Y2D9 606 aa16.4■□□□□ 0.22
CTSC-202ENST00000393301 NUP98P52948 1817 aa16.4■□□□□ 0.22
CTSC-202ENST00000393301 RIC1Q4ADV7 1423 aa16.39■□□□□ 0.21
CTSC-202ENST00000393301 DCTN1Q14203 1278 aa16.39■□□□□ 0.21
CTSC-202ENST00000393301 DNAJC5GQ8N7S2 189 aa16.39■□□□□ 0.21
CTSC-202ENST00000393301 CNKSR1Q969H4 720 aa16.39■□□□□ 0.21
CTSC-202ENST00000393301 ZNF316A6NFI3 1004 aaPredicted RBP16.38■□□□□ 0.21
CTSC-202ENST00000393301 ST5P78524 1137 aa16.38■□□□□ 0.21
CTSC-202ENST00000393301 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
CTSC-202ENST00000393301 IBTKQ9P2D0 1353 aaPredicted RBP16.38■□□□□ 0.21
CTSC-202ENST00000393301 PCNTO95613 3336 aa16.37■□□□□ 0.21
CTSC-202ENST00000393301 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
CTSC-202ENST00000393301 C7orf43Q8WVR3 580 aa16.37■□□□□ 0.21
CTSC-202ENST00000393301 MASTLQ96GX5 879 aa16.37■□□□□ 0.21
CTSC-202ENST00000393301 PNNQ9H307 717 aaKnown RBP16.37■□□□□ 0.21
CTSC-202ENST00000393301 ZNF330Q9Y3S2 320 aaPredicted RBP16.37■□□□□ 0.21
CTSC-202ENST00000393301 NEFMP07197 916 aa16.36■□□□□ 0.21
CTSC-202ENST00000393301 C16orf71Q8IYS4 520 aaPredicted RBP16.36■□□□□ 0.21
CTSC-202ENST00000393301 ERBB4Q15303 1308 aa16.36■□□□□ 0.21
CTSC-202ENST00000393301 SNED1Q8TER0 1413 aa16.36■□□□□ 0.21
CTSC-202ENST00000393301 ERVV-1B6SEH8 477 aa16.35■□□□□ 0.21
CTSC-202ENST00000393301 EIF4A1P60842 406 aaKnown RBP16.35■□□□□ 0.21
CTSC-202ENST00000393301 ZNF622Q969S3 477 aaKnown RBP eCLIP16.35■□□□□ 0.21
CTSC-202ENST00000393301 RRAGCQ9HB90 399 aa16.35■□□□□ 0.21
CTSC-202ENST00000393301 VEGFAP15692 232 aaPredicted RBP16.34■□□□□ 0.21
CTSC-202ENST00000393301 PIP4K2AP48426 406 aaPredicted RBP16.34■□□□□ 0.21
CTSC-202ENST00000393301 RALBP1Q15311 655 aa16.34■□□□□ 0.21
CTSC-202ENST00000393301 PRPF40BQ6NWY9 871 aaKnown RBP16.34■□□□□ 0.21
CTSC-202ENST00000393301 NBPF5PQ86XG9 351 aaPredicted RBP16.34■□□□□ 0.21
CTSC-202ENST00000393301 SMC1BQ8NDV3 1235 aa16.34■□□□□ 0.21
CTSC-202ENST00000393301 TAOK3Q9H2K8 898 aa16.34■□□□□ 0.21
CTSC-202ENST00000393301 BABAM1Q9NWV8 329 aa16.34■□□□□ 0.21
CTSC-202ENST00000393301 SCN4AP35499 1836 aa16.33■□□□□ 0.21
CTSC-202ENST00000393301 POTECB2RU33 542 aa16.33■□□□□ 0.2
CTSC-202ENST00000393301 C21orf2O43822 256 aa16.33■□□□□ 0.2
CTSC-202ENST00000393301 NPR1P16066 1061 aa16.33■□□□□ 0.2
CTSC-202ENST00000393301 TPTE2Q6XPS3 522 aa16.33■□□□□ 0.2
CTSC-202ENST00000393301 CRY2Q49AN0 593 aa16.32■□□□□ 0.2
CTSC-202ENST00000393301 MAP3K15Q6ZN16 1313 aa16.32■□□□□ 0.2
CTSC-202ENST00000393301 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
CTSC-202ENST00000393301 JMYQ8N9B5 988 aa16.32■□□□□ 0.2
CTSC-202ENST00000393301 NIP7Q9Y221 180 aaKnown RBP eCLIP16.32■□□□□ 0.2
CTSC-202ENST00000393301 HLFQ16534 295 aa16.31■□□□□ 0.2
CTSC-202ENST00000393301 LRP10Q7Z4F1 713 aa16.31■□□□□ 0.2
CTSC-202ENST00000393301 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
CTSC-202ENST00000393301 IFFO2Q5TF58 517 aa16.3■□□□□ 0.2
CTSC-202ENST00000393301 DPY19L2Q6NUT2 758 aa16.3■□□□□ 0.2
CTSC-202ENST00000393301 KLRG1Q96E93 195 aa16.3■□□□□ 0.2
CTSC-202ENST00000393301 MIS18AQ9NYP9 233 aa16.3■□□□□ 0.2
CTSC-202ENST00000393301 ABCC12Q96J65 1359 aa16.29■□□□□ 0.2
CTSC-202ENST00000393301 ANKRD36CQ5JPF3 1778 aa16.29■□□□□ 0.2
CTSC-202ENST00000393301 ERFEQ4G0M1 354 aa16.29■□□□□ 0.2
CTSC-202ENST00000393301 CCDC93Q567U6 631 aa16.29■□□□□ 0.2
CTSC-202ENST00000393301 L3MBTL3Q96JM7 780 aaPredicted RBP16.29■□□□□ 0.2
CTSC-202ENST00000393301 NYXQ9GZU5 481 aa16.29■□□□□ 0.2
CTSC-202ENST00000393301 NPHP1O15259 732 aa16.28■□□□□ 0.2
CTSC-202ENST00000393301 FKBP4Q02790 459 aaKnown RBP eCLIP16.28■□□□□ 0.2
CTSC-202ENST00000393301 ALDH1B1P30837 517 aa16.27■□□□□ 0.2
CTSC-202ENST00000393301 HOXA10P31260 410 aaPredicted RBP16.27■□□□□ 0.2
CTSC-202ENST00000393301 DDX10Q13206 875 aaKnown RBP16.27■□□□□ 0.2
CTSC-202ENST00000393301 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.2
CTSC-202ENST00000393301 ADAMTSL1Q8N6G6 1762 aa16.27■□□□□ 0.2
CTSC-202ENST00000393301 UBN2Q6ZU65 1347 aa16.26■□□□□ 0.19
CTSC-202ENST00000393301 MYBBP1AQ9BQG0 1328 aaKnown RBP16.26■□□□□ 0.19
CTSC-202ENST00000393301 LMOD3Q0VAK6 560 aa16.26■□□□□ 0.19
CTSC-202ENST00000393301 GIGYF2Q6Y7W6 1299 aaKnown RBP16.26■□□□□ 0.19
CTSC-202ENST00000393301 TTLL7Q6ZT98 887 aa16.26■□□□□ 0.19
CTSC-202ENST00000393301 ZNF34Q8IZ26 560 aa16.26■□□□□ 0.19
CTSC-202ENST00000393301 RTKN2Q8IZC4 609 aa16.26■□□□□ 0.19
CTSC-202ENST00000393301 RNF123Q5XPI4 1314 aa16.25■□□□□ 0.19
CTSC-202ENST00000393301 TMPOP42166 694 aaKnown RBP16.25■□□□□ 0.19
CTSC-202ENST00000393301 PDIA6Q15084 440 aa16.25■□□□□ 0.19
CTSC-202ENST00000393301 CC2D2BQ6DHV5 1058 aa16.25■□□□□ 0.19
CTSC-202ENST00000393301 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
CTSC-202ENST00000393301 PSMD1Q99460 953 aa16.25■□□□□ 0.19
CTSC-202ENST00000393301 GRIPAP1Q4V328 841 aa16.24■□□□□ 0.19
CTSC-202ENST00000393301 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
CTSC-202ENST00000393301 TSPYL4Q9UJ04 414 aa16.24■□□□□ 0.19
CTSC-202ENST00000393301 NTSR2O95665 410 aa16.23■□□□□ 0.19
CTSC-202ENST00000393301 RIPK4P57078 832 aa16.23■□□□□ 0.19
CTSC-202ENST00000393301 PARP10Q53GL7 1025 aa16.23■□□□□ 0.19
CTSC-202ENST00000393301 IQCA1LA6NCM1 817 aa16.22■□□□□ 0.19
CTSC-202ENST00000393301 FZD9O00144 591 aa16.22■□□□□ 0.19
CTSC-202ENST00000393301 DDNO94850 711 aaPredicted RBP16.22■□□□□ 0.19
CTSC-202ENST00000393301 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
CTSC-202ENST00000393301 RRP7AQ9Y3A4 280 aaKnown RBP16.22■□□□□ 0.19
CTSC-202ENST00000393301 LAMB2P55268 1798 aa16.22■□□□□ 0.19
CTSC-202ENST00000393301 HTRA3P83110 453 aa16.21■□□□□ 0.19
CTSC-202ENST00000393301 SLC10A5Q5PT55 438 aa16.21■□□□□ 0.19
CTSC-202ENST00000393301 SUSD4Q5VX71 490 aa16.21■□□□□ 0.19
CTSC-202ENST00000393301 CHADLQ6NUI6 762 aa16.21■□□□□ 0.19
CTSC-202ENST00000393301 CHL1O00533 1208 aa16.2■□□□□ 0.18
CTSC-202ENST00000393301 HOXB7P09629 217 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms