RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 NFIXQ14938 502 aa14.41□□□□□ -0.1
TRAF3IP2-208ENST00000392556 IL17REQ8NFR9 667 aa14.41□□□□□ -0.1
TRAF3IP2-208ENST00000392556 UTRNP46939 3433 aa14.41□□□□□ -0.1
TRAF3IP2-208ENST00000392556 HTATSF1O43719 755 aaKnown RBP14.41□□□□□ -0.1
TRAF3IP2-208ENST00000392556 TOMM70O94826 608 aa14.41□□□□□ -0.1
TRAF3IP2-208ENST00000392556 ZNF526Q8TF50 670 aaPredicted RBP14.41□□□□□ -0.1
TRAF3IP2-208ENST00000392556 NRXN2Q9P2S2 1712 aa14.41□□□□□ -0.1
TRAF3IP2-208ENST00000392556 RGL2O15211 777 aa14.4□□□□□ -0.1
TRAF3IP2-208ENST00000392556 KDM2BQ8NHM5 1336 aa14.4□□□□□ -0.1
TRAF3IP2-208ENST00000392556 VIRMAQ69YN4 1812 aaKnown RBP14.4□□□□□ -0.1
TRAF3IP2-208ENST00000392556 SERPINB2P05120 415 aa14.4□□□□□ -0.1
TRAF3IP2-208ENST00000392556 ZNF496Q96IT1 587 aaPredicted RBP14.4□□□□□ -0.1
TRAF3IP2-208ENST00000392556 CANXP27824 592 aaKnown RBP14.39□□□□□ -0.11
TRAF3IP2-208ENST00000392556 C9orf131Q5VYM1 1079 aa14.39□□□□□ -0.11
TRAF3IP2-208ENST00000392556 PRKAR2BP31323 418 aa14.39□□□□□ -0.11
TRAF3IP2-208ENST00000392556 RTF1Q92541 710 aaKnown RBP14.39□□□□□ -0.11
TRAF3IP2-208ENST00000392556 BCL2L12Q9HB09 334 aa14.39□□□□□ -0.11
TRAF3IP2-208ENST00000392556 SIPA1L3O60292 1781 aaPredicted RBP14.38□□□□□ -0.11
TRAF3IP2-208ENST00000392556 BTBD11A6QL63 1104 aa14.37□□□□□ -0.11
TRAF3IP2-208ENST00000392556 H0YIN7 160 aa14.37□□□□□ -0.11
TRAF3IP2-208ENST00000392556 PPP2R1AP30153 589 aa14.37□□□□□ -0.11
TRAF3IP2-208ENST00000392556 APLP1P51693 650 aa14.37□□□□□ -0.11
TRAF3IP2-208ENST00000392556 RBM46Q8TBY0 533 aaKnown RBP14.37□□□□□ -0.11
TRAF3IP2-208ENST00000392556 CHRNA5P30532 468 aa14.37□□□□□ -0.11
TRAF3IP2-208ENST00000392556 PDE6BP35913 854 aa14.37□□□□□ -0.11
TRAF3IP2-208ENST00000392556 RRP1P56182 461 aaKnown RBP14.37□□□□□ -0.11
TRAF3IP2-208ENST00000392556 TTLL6Q8N841 843 aa14.37□□□□□ -0.11
TRAF3IP2-208ENST00000392556 CARMIL3Q8ND23 1372 aa14.37□□□□□ -0.11
TRAF3IP2-208ENST00000392556 SLC4A3P48751 1232 aa14.36□□□□□ -0.11
TRAF3IP2-208ENST00000392556 BRIP1Q9BX63 1249 aa14.36□□□□□ -0.11
TRAF3IP2-208ENST00000392556 U2AF1L5P0DN76 240 aaPredicted RBP14.36□□□□□ -0.11
TRAF3IP2-208ENST00000392556 U2AF1Q01081 240 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRAF3IP2-208ENST00000392556 C16orf71Q8IYS4 520 aaPredicted RBP14.36□□□□□ -0.11
TRAF3IP2-208ENST00000392556 EXOC6Q8TAG9 804 aa14.36□□□□□ -0.11
TRAF3IP2-208ENST00000392556 RNF181Q9P0P0 153 aa14.36□□□□□ -0.11
TRAF3IP2-208ENST00000392556 FSD2A1L4K1 749 aa14.35□□□□□ -0.11
TRAF3IP2-208ENST00000392556 RGS3P49796 1198 aa14.35□□□□□ -0.11
TRAF3IP2-208ENST00000392556 FSTL1Q12841 308 aa14.35□□□□□ -0.11
TRAF3IP2-208ENST00000392556 CLEC4GQ6UXB4 293 aa14.35□□□□□ -0.11
TRAF3IP2-208ENST00000392556 C2CD5Q86YS7 1000 aa14.35□□□□□ -0.11
TRAF3IP2-208ENST00000392556 PHACTR3Q96KR7 559 aa14.35□□□□□ -0.11
TRAF3IP2-208ENST00000392556 SCN7AQ01118 1682 aa14.35□□□□□ -0.11
TRAF3IP2-208ENST00000392556 SNRPA1P09661 255 aaKnown RBP14.34□□□□□ -0.11
TRAF3IP2-208ENST00000392556 MAP7D2Q96T17 732 aa14.34□□□□□ -0.11
TRAF3IP2-208ENST00000392556 DLEC1Q9Y238 1755 aa14.34□□□□□ -0.11
TRAF3IP2-208ENST00000392556 LMNB1P20700 586 aa14.34□□□□□ -0.11
TRAF3IP2-208ENST00000392556 ZNF652Q9Y2D9 606 aa14.34□□□□□ -0.11
TRAF3IP2-208ENST00000392556 AFDNP55196 1824 aaKnown RBP14.33□□□□□ -0.11
TRAF3IP2-208ENST00000392556 XRCC6P12956 609 aaKnown RBP eCLIP14.33□□□□□ -0.11
TRAF3IP2-208ENST00000392556 PNISRQ8TF01 805 aaKnown RBP14.33□□□□□ -0.11
TRAF3IP2-208ENST00000392556 SETDB2Q96T68 719 aa14.33□□□□□ -0.11
TRAF3IP2-208ENST00000392556 SOGA3Q5TF21 947 aa14.33□□□□□ -0.12
TRAF3IP2-208ENST00000392556 SMAP1Q8IYB5 467 aaPredicted RBP14.33□□□□□ -0.12
TRAF3IP2-208ENST00000392556 ST5P78524 1137 aa14.32□□□□□ -0.12
TRAF3IP2-208ENST00000392556 TBC1D9BQ66K14 1250 aa14.32□□□□□ -0.12
TRAF3IP2-208ENST00000392556 CAMTA2O94983 1202 aa14.32□□□□□ -0.12
TRAF3IP2-208ENST00000392556 CNGB1Q14028 1251 aaPredicted RBP14.32□□□□□ -0.12
TRAF3IP2-208ENST00000392556 CNKSR1Q969H4 720 aa14.32□□□□□ -0.12
TRAF3IP2-208ENST00000392556 NMRK2Q9NPI5 230 aa14.32□□□□□ -0.12
TRAF3IP2-208ENST00000392556 GOLGA6L3A6NEY3 463 aa14.31□□□□□ -0.12
TRAF3IP2-208ENST00000392556 STYK1Q6J9G0 422 aa14.31□□□□□ -0.12
TRAF3IP2-208ENST00000392556 PRR5LQ6MZQ0 368 aa14.31□□□□□ -0.12
TRAF3IP2-208ENST00000392556 DZIP3Q86Y13 1208 aaKnown RBP14.31□□□□□ -0.12
TRAF3IP2-208ENST00000392556 CNBD1Q8NA66 436 aa14.31□□□□□ -0.12
TRAF3IP2-208ENST00000392556 TBC1D2BQ9UPU7 963 aa14.31□□□□□ -0.12
TRAF3IP2-208ENST00000392556 TNRC6CQ9HCJ0 1690 aaKnown RBP14.31□□□□□ -0.12
TRAF3IP2-208ENST00000392556 LTBP3Q9NS15 1303 aa14.31□□□□□ -0.12
TRAF3IP2-208ENST00000392556 A1BGP04217 495 aa14.3□□□□□ -0.12
TRAF3IP2-208ENST00000392556 TAF7Q15545 349 aaPredicted RBP14.3□□□□□ -0.12
TRAF3IP2-208ENST00000392556 TAF7LQ5H9L4 462 aa14.3□□□□□ -0.12
TRAF3IP2-208ENST00000392556 BICDL1Q6ZP65 573 aa14.3□□□□□ -0.12
TRAF3IP2-208ENST00000392556 TERF1P54274 439 aa14.3□□□□□ -0.12
TRAF3IP2-208ENST00000392556 ZNF330Q9Y3S2 320 aaPredicted RBP14.3□□□□□ -0.12
TRAF3IP2-208ENST00000392556 GLTPD2A6NH11 291 aa14.29□□□□□ -0.12
TRAF3IP2-208ENST00000392556 ESPNB1AK53 854 aa14.29□□□□□ -0.12
TRAF3IP2-208ENST00000392556 NPHP1O15259 732 aa14.29□□□□□ -0.12
TRAF3IP2-208ENST00000392556 SMC1BQ8NDV3 1235 aa14.29□□□□□ -0.12
TRAF3IP2-208ENST00000392556 USP16Q9Y5T5 823 aa14.29□□□□□ -0.12
TRAF3IP2-208ENST00000392556 NCLP19338 710 aaKnown RBP14.28□□□□□ -0.12
TRAF3IP2-208ENST00000392556 FAM161AQ3B820 660 aa14.28□□□□□ -0.12
TRAF3IP2-208ENST00000392556 DPY19L2Q6NUT2 758 aa14.28□□□□□ -0.12
TRAF3IP2-208ENST00000392556 SBF1O95248 1867 aa14.27□□□□□ -0.12
TRAF3IP2-208ENST00000392556 BCORQ6W2J9 1755 aa14.27□□□□□ -0.12
TRAF3IP2-208ENST00000392556 KCNQ3O43525 872 aa14.27□□□□□ -0.12
TRAF3IP2-208ENST00000392556 MCM10Q7L590 875 aa14.27□□□□□ -0.12
TRAF3IP2-208ENST00000392556 ZNF622Q969S3 477 aaKnown RBP eCLIP14.27□□□□□ -0.12
TRAF3IP2-208ENST00000392556 MASTLQ96GX5 879 aa14.27□□□□□ -0.12
TRAF3IP2-208ENST00000392556 VEGFAP15692 232 aaPredicted RBP14.27□□□□□ -0.13
TRAF3IP2-208ENST00000392556 TPTE2Q6XPS3 522 aa14.27□□□□□ -0.13
TRAF3IP2-208ENST00000392556 RRAGCQ9HB90 399 aa14.27□□□□□ -0.13
TRAF3IP2-208ENST00000392556 RASSF7Q02833 373 aa14.26□□□□□ -0.13
TRAF3IP2-208ENST00000392556 GOLGB1Q14789 3259 aaKnown RBP14.26□□□□□ -0.13
TRAF3IP2-208ENST00000392556 NFKBIEO00221 500 aa14.26□□□□□ -0.13
TRAF3IP2-208ENST00000392556 SRGNP10124 158 aa14.26□□□□□ -0.13
TRAF3IP2-208ENST00000392556 NBPF5PQ86XG9 351 aaPredicted RBP14.26□□□□□ -0.13
TRAF3IP2-208ENST00000392556 KLRG2A4D1S0 409 aaPredicted RBP14.25□□□□□ -0.13
TRAF3IP2-208ENST00000392556 UTP14CQ5TAP6 766 aaKnown RBP14.25□□□□□ -0.13
TRAF3IP2-208ENST00000392556 ERVV-1B6SEH8 477 aa14.24□□□□□ -0.13
TRAF3IP2-208ENST00000392556 NPR1P16066 1061 aa14.24□□□□□ -0.13
TRAF3IP2-208ENST00000392556 MRE11P49959 708 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms