RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 KCNJ4P48050 445 aa25.21■■□□□ 1.63
COL23A1-201ENST00000390654 TEFQ10587 303 aa25.21■■□□□ 1.63
COL23A1-201ENST00000390654 CWF19L2Q2TBE0 894 aaKnown RBP25.21■■□□□ 1.63
COL23A1-201ENST00000390654 RAB11FIP3O75154 756 aa25.21■■□□□ 1.63
COL23A1-201ENST00000390654 PHF14O94880 888 aa25.21■■□□□ 1.63
COL23A1-201ENST00000390654 AIMP1Q12904 312 aaKnown RBP25.21■■□□□ 1.63
COL23A1-201ENST00000390654 POLA2Q14181 598 aa25.2■■□□□ 1.62
COL23A1-201ENST00000390654 HTATSF1O43719 755 aaKnown RBP25.2■■□□□ 1.62
COL23A1-201ENST00000390654 KIAA2012Q0VF49 1180 aa25.2■■□□□ 1.62
COL23A1-201ENST00000390654 BEND3Q5T5X7 828 aa25.2■■□□□ 1.62
COL23A1-201ENST00000390654 ZNF530Q6P9A1 599 aaPredicted RBP25.2■■□□□ 1.62
COL23A1-201ENST00000390654 C9orf78Q9NZ63 289 aaPredicted RBP25.2■■□□□ 1.62
COL23A1-201ENST00000390654 PHF8Q9UPP1 1060 aa25.19■■□□□ 1.62
COL23A1-201ENST00000390654 F13A1P00488 732 aa25.19■■□□□ 1.62
COL23A1-201ENST00000390654 PROSER3Q2NL68 480 aa25.19■■□□□ 1.62
COL23A1-201ENST00000390654 CCDC183Q5T5S1 534 aa25.19■■□□□ 1.62
COL23A1-201ENST00000390654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.19■■□□□ 1.62
COL23A1-201ENST00000390654 EIF4A1P60842 406 aaKnown RBP25.18■■□□□ 1.62
COL23A1-201ENST00000390654 SIL1Q9H173 461 aa25.18■■□□□ 1.62
COL23A1-201ENST00000390654 PDRG1Q9NUG6 133 aa25.18■■□□□ 1.62
COL23A1-201ENST00000390654 CSPP1Q1MSJ5 1256 aa25.17■■□□□ 1.62
COL23A1-201ENST00000390654 CLASRPQ8N2M8 674 aaKnown RBP25.17■■□□□ 1.62
COL23A1-201ENST00000390654 SPC24Q8NBT2 197 aa25.17■■□□□ 1.62
COL23A1-201ENST00000390654 CCDC8Q9H0W5 538 aaPredicted RBP25.17■■□□□ 1.62
COL23A1-201ENST00000390654 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.17■■□□□ 1.62
COL23A1-201ENST00000390654 BTBD11A6QL63 1104 aa25.16■■□□□ 1.62
COL23A1-201ENST00000390654 FAM227BQ96M60 508 aa25.16■■□□□ 1.62
COL23A1-201ENST00000390654 HYPKQ9NX55 129 aa25.16■■□□□ 1.62
COL23A1-201ENST00000390654 IFIT2P09913 472 aaKnown RBP25.16■■□□□ 1.62
COL23A1-201ENST00000390654 TRHP20396 242 aaPredicted RBP25.16■■□□□ 1.62
COL23A1-201ENST00000390654 MAP3K2Q9Y2U5 619 aa25.16■■□□□ 1.62
COL23A1-201ENST00000390654 CAMK4Q16566 473 aa25.16■■□□□ 1.62
COL23A1-201ENST00000390654 AACSQ86V21 672 aa25.16■■□□□ 1.62
COL23A1-201ENST00000390654 KLHDC4Q8TBB5 520 aa25.15■■□□□ 1.62
COL23A1-201ENST00000390654 AOX1Q06278 1338 aa25.14■■□□□ 1.62
COL23A1-201ENST00000390654 UBE2HP62256 183 aa25.14■■□□□ 1.62
COL23A1-201ENST00000390654 STK3Q13188 491 aa25.14■■□□□ 1.61
COL23A1-201ENST00000390654 ME3Q16798 604 aa25.14■■□□□ 1.61
COL23A1-201ENST00000390654 PKNOX2Q96KN3 472 aa25.14■■□□□ 1.61
COL23A1-201ENST00000390654 GLRX3O76003 335 aaKnown RBP25.13■■□□□ 1.61
COL23A1-201ENST00000390654 MCM5P33992 734 aa25.13■■□□□ 1.61
COL23A1-201ENST00000390654 SASS6Q6UVJ0 657 aa25.13■■□□□ 1.61
COL23A1-201ENST00000390654 DIP2AQ14689 1571 aa25.13■■□□□ 1.61
COL23A1-201ENST00000390654 XRN1Q8IZH2 1706 aaKnown RBP25.13■■□□□ 1.61
COL23A1-201ENST00000390654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.13■■□□□ 1.61
COL23A1-201ENST00000390654 PIP4K2AP48426 406 aaPredicted RBP25.13■■□□□ 1.61
COL23A1-201ENST00000390654 MTMR6Q9Y217 621 aa25.12■■□□□ 1.61
COL23A1-201ENST00000390654 TAF6LQ9Y6J9 622 aa25.12■■□□□ 1.61
COL23A1-201ENST00000390654 AP5Z1O43299 807 aa25.12■■□□□ 1.61
COL23A1-201ENST00000390654 ORAI2Q96SN7 254 aa25.12■■□□□ 1.61
COL23A1-201ENST00000390654 BOLA2Q9H3K6 86 aa25.11■■□□□ 1.61
COL23A1-201ENST00000390654 CYP46A1Q9Y6A2 500 aa25.11■■□□□ 1.61
COL23A1-201ENST00000390654 ST3GAL1Q11201 340 aa25.11■■□□□ 1.61
COL23A1-201ENST00000390654 ECHDC1Q9NTX5 307 aa25.11■■□□□ 1.61
COL23A1-201ENST00000390654 TLR7Q9NYK1 1049 aaKnown RBP25.11■■□□□ 1.61
COL23A1-201ENST00000390654 CCDC9Q9Y3X0 531 aaKnown RBP25.11■■□□□ 1.61
COL23A1-201ENST00000390654 NALCNQ8IZF0 1738 aa25.1■■□□□ 1.61
COL23A1-201ENST00000390654 NOLC1Q14978 699 aaKnown RBP eCLIP25.1■■□□□ 1.61
COL23A1-201ENST00000390654 EDC3Q96F86 508 aaKnown RBP25.1■■□□□ 1.61
COL23A1-201ENST00000390654 TFIP11Q9UBB9 837 aaKnown RBP25.1■■□□□ 1.61
COL23A1-201ENST00000390654 RBM8AQ9Y5S9 174 aaKnown RBP25.1■■□□□ 1.61
COL23A1-201ENST00000390654 NDUFB9Q9Y6M9 179 aa25.1■■□□□ 1.61
COL23A1-201ENST00000390654 TPCN1Q9ULQ1 816 aa25.09■■□□□ 1.61
COL23A1-201ENST00000390654 FAM208AQ9UK61 1670 aaKnown RBP25.09■■□□□ 1.61
COL23A1-201ENST00000390654 ADCY9O60503 1353 aa25.09■■□□□ 1.61
COL23A1-201ENST00000390654 FMN2Q9NZ56 1722 aa25.08■■□□□ 1.61
COL23A1-201ENST00000390654 TERF1P54274 439 aa25.08■■□□□ 1.61
COL23A1-201ENST00000390654 LARP1BQ659C4 914 aaKnown RBP25.08■■□□□ 1.61
COL23A1-201ENST00000390654 PIK3C2AO00443 1686 aa25.08■■□□□ 1.61
COL23A1-201ENST00000390654 TOPAZ1Q8N9V7 1692 aa25.08■■□□□ 1.61
COL23A1-201ENST00000390654 TUBGCP6Q96RT7 1819 aa25.08■■□□□ 1.6
COL23A1-201ENST00000390654 NMIQ13287 307 aaPredicted RBP25.08■■□□□ 1.6
COL23A1-201ENST00000390654 SLC39A6Q13433 755 aa25.08■■□□□ 1.6
COL23A1-201ENST00000390654 CDC37L1Q7L3B6 337 aa25.08■■□□□ 1.6
COL23A1-201ENST00000390654 CKAP2LQ8IYA6 745 aa25.08■■□□□ 1.6
COL23A1-201ENST00000390654 FAM184AQ8NB25 1140 aa25.08■■□□□ 1.6
COL23A1-201ENST00000390654 RUFY2Q8WXA3 655 aa25.08■■□□□ 1.6
COL23A1-201ENST00000390654 ZC3H6P61129 1189 aaKnown RBP25.07■■□□□ 1.6
COL23A1-201ENST00000390654 KDM4AO75164 1064 aa25.07■■□□□ 1.6
COL23A1-201ENST00000390654 HSP90AB4PQ58FF6 505 aa25.07■■□□□ 1.6
COL23A1-201ENST00000390654 TMEM87AQ8NBN3 555 aa25.06■■□□□ 1.6
COL23A1-201ENST00000390654 IP6K1Q92551 441 aa25.06■■□□□ 1.6
COL23A1-201ENST00000390654 EAF2Q96CJ1 260 aaPredicted RBP25.06■■□□□ 1.6
COL23A1-201ENST00000390654 ATP6V1DQ9Y5K8 247 aa25.06■■□□□ 1.6
COL23A1-201ENST00000390654 KIF13AQ9H1H9 1805 aa25.06■■□□□ 1.6
COL23A1-201ENST00000390654 CHGBP05060 677 aa25.06■■□□□ 1.6
COL23A1-201ENST00000390654 MYL6BP14649 208 aa25.06■■□□□ 1.6
COL23A1-201ENST00000390654 ZKSCAN1P17029 563 aaPredicted RBP25.06■■□□□ 1.6
COL23A1-201ENST00000390654 C1orf141Q5JVX7 400 aa25.06■■□□□ 1.6
COL23A1-201ENST00000390654 IL17RAQ96F46 866 aa25.06■■□□□ 1.6
COL23A1-201ENST00000390654 CREB3L3Q68CJ9 461 aa25.06■■□□□ 1.6
COL23A1-201ENST00000390654 PRDM10Q9NQV6 1147 aa25.06■■□□□ 1.6
COL23A1-201ENST00000390654 SUCLG2Q96I99 432 aa25.05■■□□□ 1.6
COL23A1-201ENST00000390654 BCL11BQ9C0K0 894 aaPredicted RBP25.05■■□□□ 1.6
COL23A1-201ENST00000390654 TTC6Q86TZ1 520 aa25.04■■□□□ 1.6
COL23A1-201ENST00000390654 FSD1Q9BTV5 496 aa25.04■■□□□ 1.6
COL23A1-201ENST00000390654 CCDC171Q6TFL3 1326 aa25.04■■□□□ 1.6
COL23A1-201ENST00000390654 A0A0D9SFI3 127 aa25.04■■□□□ 1.6
COL23A1-201ENST00000390654 PPFIA3O75145 1194 aa25.04■■□□□ 1.6
COL23A1-201ENST00000390654 LIG1P18858 919 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms