RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 FAM129BQ96TA1 746 aa4.78□□□□□ -1.64
TRAJ40-201ENST00000390497 NEUROD4Q9HD90 331 aa4.78□□□□□ -1.64
TRAJ40-201ENST00000390497 CCDC87Q9NVE4 849 aa4.78□□□□□ -1.64
TRAJ40-201ENST00000390497 USP3Q9Y6I4 520 aa4.78□□□□□ -1.64
TRAJ40-201ENST00000390497 CAPN5O15484 640 aaPredicted RBP4.77□□□□□ -1.65
TRAJ40-201ENST00000390497 ATP2B2Q01814 1243 aa4.77□□□□□ -1.65
TRAJ40-201ENST00000390497 XPCQ01831 940 aaPredicted RBP4.77□□□□□ -1.65
TRAJ40-201ENST00000390497 FMR1Q06787 632 aaKnown RBP eCLIP4.77□□□□□ -1.65
TRAJ40-201ENST00000390497 ALG1LQ6GMV1 187 aa4.77□□□□□ -1.65
TRAJ40-201ENST00000390497 AIDAQ96BJ3 306 aa4.77□□□□□ -1.65
TRAJ40-201ENST00000390497 FRMD6Q96NE9 622 aa4.77□□□□□ -1.65
TRAJ40-201ENST00000390497 C11orf16Q9NQ32 467 aa4.77□□□□□ -1.65
TRAJ40-201ENST00000390497 IGSF5Q9NSI5 407 aa4.77□□□□□ -1.65
TRAJ40-201ENST00000390497 KIAA1522Q9P206 1035 aaPredicted RBP4.77□□□□□ -1.65
TRAJ40-201ENST00000390497 FNDC3AQ9Y2H6 1198 aaKnown RBP4.77□□□□□ -1.65
TRAJ40-201ENST00000390497 PARP3Q9Y6F1 533 aa4.77□□□□□ -1.65
TRAJ40-201ENST00000390497 ZBTB39O15060 712 aa4.76□□□□□ -1.65
TRAJ40-201ENST00000390497 PRPF40AO75400 957 aaKnown RBP4.76□□□□□ -1.65
TRAJ40-201ENST00000390497 MICAL2O94851 1124 aa4.76□□□□□ -1.65
TRAJ40-201ENST00000390497 ZAP70P43403 619 aa4.76□□□□□ -1.65
TRAJ40-201ENST00000390497 DNM1Q05193 864 aaKnown RBP4.76□□□□□ -1.65
TRAJ40-201ENST00000390497 C4orf17Q53FE4 359 aa4.76□□□□□ -1.65
TRAJ40-201ENST00000390497 IER5Q5VY09 327 aa4.76□□□□□ -1.65
TRAJ40-201ENST00000390497 TREML1Q86YW5 311 aa4.76□□□□□ -1.65
TRAJ40-201ENST00000390497 ETFBKMTQ8IXQ9 262 aa4.76□□□□□ -1.65
TRAJ40-201ENST00000390497 GJD3Q8N144 294 aa4.76□□□□□ -1.65
TRAJ40-201ENST00000390497 HPS1Q92902 700 aa4.76□□□□□ -1.65
TRAJ40-201ENST00000390497 POLIQ9UNA4 740 aa4.76□□□□□ -1.65
TRAJ40-201ENST00000390497 TGFBR3LH3BV60 316 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 TNFRSF10AO00220 468 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 PDGFAP04085 211 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 LDHBP07195 334 aaKnown RBP4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 BMP2P12643 396 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 SCARF1Q14162 830 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 SH3PXD2AQ5TCZ1 1133 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 NBPF10Q6P3W6 841 aaKnown RBP4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 XKR5Q6UX68 686 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 LYSMD3Q7Z3D4 306 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 LINC00528Q8N1L1 170 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 RHPN1Q8TCX5 695 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 C7orf43Q8WVR3 580 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 EDEM1Q92611 657 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 INSM2Q96T92 566 aaPredicted RBP4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 DNAJC25Q9H1X3 360 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 POLMQ9NP87 494 aaPredicted RBP4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 KLK14Q9P0G3 267 aa4.75□□□□□ -1.65
TRAJ40-201ENST00000390497 A0A1B0GTH6 734 aa4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 IGHA2P01877 340 aa4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 P4HBP07237 508 aaKnown RBP4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 TCF3P15923 654 aa4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 TXLNAP40222 546 aa4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 MAPK8P45983 427 aa4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 PLA2G4AP47712 749 aa4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 POU4F2Q12837 409 aa4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 BICDL1Q6ZP65 573 aa4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 FBF1Q8TES7 1133 aa4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 SUSD3Q96L08 255 aa4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 NIF3L1Q9GZT8 377 aa4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 MRS2Q9HD23 443 aa4.74□□□□□ -1.65
TRAJ40-201ENST00000390497 SORBS3O60504 671 aa4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 EPB42P16452 691 aa4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 DAB2P98082 770 aa4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 ENOX2Q16206 610 aaKnown RBP4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 CTC1Q2NKJ3 1217 aa4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 C8orf34Q49A92 452 aa4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 ARSJQ5FYB0 599 aaPredicted RBP4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 MRPL14Q6P1L8 145 aaKnown RBP4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 TMC4Q7Z404 712 aa4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 ATCAYQ86WG3 371 aa4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 GPR152Q8TDT2 470 aa4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 PMEPA1Q969W9 287 aa4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 NUDT16Q96DE0 195 aaKnown RBP4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 TIMMDC1Q9NPL8 285 aa4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 PARP2Q9UGN5 583 aa4.73□□□□□ -1.65
TRAJ40-201ENST00000390497 TTLL8A6PVC2 850 aa4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 SCAMP3O14828 347 aaKnown RBP4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 OPLAHO14841 1288 aa4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 GIPC1O14908 333 aa4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 AVPP01185 164 aa4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 CTSOP43234 321 aaPredicted RBP4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 PHKA2P46019 1235 aa4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 ARSDP51689 593 aa4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 TAGLNQ01995 201 aaKnown RBP4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 MRPL58Q14197 206 aaKnown RBP4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 PDE12Q6L8Q7 609 aaKnown RBP4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 TRIM67Q6ZTA4 783 aa4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 PRICKLE2Q7Z3G6 844 aa4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 CSRNP1Q96S65 589 aa4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 BACH2Q9BYV9 841 aa4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 DMGDHQ9UI17 866 aaKnown RBP4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 PDZRN3Q9UPQ7 1066 aa4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 BCS1LQ9Y276 419 aa4.72□□□□□ -1.65
TRAJ40-201ENST00000390497 GPR182O15218 404 aa4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 CPNE3O75131 537 aaKnown RBP4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 DGAT1O75907 488 aa4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 INPP5BP32019 993 aa4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 SMCPP49901 116 aaPredicted RBP4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 PSMD2Q13200 908 aa4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 LBRQ14739 615 aaKnown RBP4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 FAM26DQ5JW98 314 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms