RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 CD44P16070 742 aaKnown RBP9.39□□□□□ -0.91
TRAV12-3-201ENST00000390442 HMGB2P26583 209 aaKnown RBP9.39□□□□□ -0.91
TRAV12-3-201ENST00000390442 ITPK1Q13572 414 aa9.39□□□□□ -0.91
TRAV12-3-201ENST00000390442 CCDC184Q52MB2 194 aa9.39□□□□□ -0.91
TRAV12-3-201ENST00000390442 CFAP53Q96M91 514 aa9.39□□□□□ -0.91
TRAV12-3-201ENST00000390442 C4BP0C0L5 1744 aa9.39□□□□□ -0.91
TRAV12-3-201ENST00000390442 HSP90AB1P08238 724 aaKnown RBP9.38□□□□□ -0.91
TRAV12-3-201ENST00000390442 NFATC2IPQ8NCF5 419 aa9.38□□□□□ -0.91
TRAV12-3-201ENST00000390442 TMEM106CQ9BVX2 250 aa9.38□□□□□ -0.91
TRAV12-3-201ENST00000390442 FAM117AQ9C073 453 aa9.38□□□□□ -0.91
TRAV12-3-201ENST00000390442 TMOD3Q9NYL9 352 aa9.38□□□□□ -0.91
TRAV12-3-201ENST00000390442 TJP1Q07157 1748 aa9.38□□□□□ -0.91
TRAV12-3-201ENST00000390442 KCPQ6ZWJ8 1503 aa9.37□□□□□ -0.91
TRAV12-3-201ENST00000390442 LOC102724428A0A0B4J2F2 783 aa9.37□□□□□ -0.91
TRAV12-3-201ENST00000390442 A6NJR5 290 aa9.37□□□□□ -0.91
TRAV12-3-201ENST00000390442 PHF14O94880 888 aa9.37□□□□□ -0.91
TRAV12-3-201ENST00000390442 U2AF1L5P0DN76 240 aaPredicted RBP9.37□□□□□ -0.91
TRAV12-3-201ENST00000390442 SIK1P57059 783 aa9.37□□□□□ -0.91
TRAV12-3-201ENST00000390442 U2AF1Q01081 240 aaKnown RBP eCLIP9.37□□□□□ -0.91
TRAV12-3-201ENST00000390442 GOLGA2Q08379 1002 aa9.37□□□□□ -0.91
TRAV12-3-201ENST00000390442 SLC52A2Q9HAB3 445 aa9.37□□□□□ -0.91
TRAV12-3-201ENST00000390442 GOPCQ9HD26 462 aa9.37□□□□□ -0.91
TRAV12-3-201ENST00000390442 KIF3CO14782 793 aa9.36□□□□□ -0.91
TRAV12-3-201ENST00000390442 APLP1P51693 650 aa9.36□□□□□ -0.91
TRAV12-3-201ENST00000390442 C1orf141Q5JVX7 400 aa9.36□□□□□ -0.91
TRAV12-3-201ENST00000390442 LINC00116Q8NCU8 138 aa9.36□□□□□ -0.91
TRAV12-3-201ENST00000390442 SMARCC1Q92922 1105 aaPredicted RBP9.36□□□□□ -0.91
TRAV12-3-201ENST00000390442 NUDCQ9Y266 331 aa9.36□□□□□ -0.91
TRAV12-3-201ENST00000390442 SPDYE16A6NNV3 312 aaPredicted RBP9.35□□□□□ -0.91
TRAV12-3-201ENST00000390442 GNAT3A8MTJ3 354 aa9.35□□□□□ -0.91
TRAV12-3-201ENST00000390442 CABP4P57796 275 aa9.35□□□□□ -0.91
TRAV12-3-201ENST00000390442 GAS2L2Q8NHY3 880 aa9.35□□□□□ -0.91
TRAV12-3-201ENST00000390442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.34□□□□□ -0.91
TRAV12-3-201ENST00000390442 SMIM5Q71RC9 77 aa9.34□□□□□ -0.91
TRAV12-3-201ENST00000390442 GPR37O15354 613 aa9.33□□□□□ -0.92
TRAV12-3-201ENST00000390442 KCNQ3O43525 872 aa9.33□□□□□ -0.92
TRAV12-3-201ENST00000390442 SSFA2P28290 1259 aa9.33□□□□□ -0.92
TRAV12-3-201ENST00000390442 SLC39A6Q13433 755 aa9.33□□□□□ -0.92
TRAV12-3-201ENST00000390442 DCTN1Q14203 1278 aa9.33□□□□□ -0.92
TRAV12-3-201ENST00000390442 AMHR2Q16671 573 aa9.33□□□□□ -0.92
TRAV12-3-201ENST00000390442 ADAMTS8Q9UP79 889 aa9.33□□□□□ -0.92
TRAV12-3-201ENST00000390442 KDM3BQ7LBC6 1761 aa9.32□□□□□ -0.92
TRAV12-3-201ENST00000390442 WDR90Q96KV7 1748 aa9.32□□□□□ -0.92
TRAV12-3-201ENST00000390442 HTATSF1O43719 755 aaKnown RBP9.32□□□□□ -0.92
TRAV12-3-201ENST00000390442 TOMM70O94826 608 aa9.32□□□□□ -0.92
TRAV12-3-201ENST00000390442 ATP6V1AP38606 617 aa9.32□□□□□ -0.92
TRAV12-3-201ENST00000390442 PDIA6Q15084 440 aa9.32□□□□□ -0.92
TRAV12-3-201ENST00000390442 MCM10Q7L590 875 aa9.32□□□□□ -0.92
TRAV12-3-201ENST00000390442 MS4A3Q96HJ5 214 aa9.32□□□□□ -0.92
TRAV12-3-201ENST00000390442 N4BP2Q86UW6 1770 aaPredicted RBP9.32□□□□□ -0.92
TRAV12-3-201ENST00000390442 C4AP0C0L4 1744 aa9.31□□□□□ -0.92
TRAV12-3-201ENST00000390442 GNPATO15228 680 aa9.31□□□□□ -0.92
TRAV12-3-201ENST00000390442 NFE2L2Q16236 605 aa9.31□□□□□ -0.92
TRAV12-3-201ENST00000390442 RC3H1Q5TC82 1133 aaKnown RBP9.31□□□□□ -0.92
TRAV12-3-201ENST00000390442 INTS5Q6P9B9 1019 aaKnown RBP9.31□□□□□ -0.92
TRAV12-3-201ENST00000390442 PNISRQ8TF01 805 aaKnown RBP9.31□□□□□ -0.92
TRAV12-3-201ENST00000390442 ZNF496Q96IT1 587 aaPredicted RBP9.31□□□□□ -0.92
TRAV12-3-201ENST00000390442 BCS1LQ9Y276 419 aa9.31□□□□□ -0.92
TRAV12-3-201ENST00000390442 HEG1Q9ULI3 1381 aa9.31□□□□□ -0.92
TRAV12-3-201ENST00000390442 PXDNLA1KZ92 1463 aa9.31□□□□□ -0.92
TRAV12-3-201ENST00000390442 KIF13BQ9NQT8 1826 aa9.31□□□□□ -0.92
TRAV12-3-201ENST00000390442 CNTNAP4Q9C0A0 1308 aa9.31□□□□□ -0.92
TRAV12-3-201ENST00000390442 TRAK2O60296 914 aa9.3□□□□□ -0.92
TRAV12-3-201ENST00000390442 PTCD1O75127 700 aaKnown RBP9.3□□□□□ -0.92
TRAV12-3-201ENST00000390442 MMP10P09238 476 aa9.3□□□□□ -0.92
TRAV12-3-201ENST00000390442 CYP19A1P11511 503 aaPredicted RBP9.3□□□□□ -0.92
TRAV12-3-201ENST00000390442 TMPOP42166 694 aaKnown RBP9.3□□□□□ -0.92
TRAV12-3-201ENST00000390442 MAP2K5Q13163 448 aa9.3□□□□□ -0.92
TRAV12-3-201ENST00000390442 ZNF790Q6PG37 636 aa9.3□□□□□ -0.92
TRAV12-3-201ENST00000390442 DNAJC10Q8IXB1 793 aa9.3□□□□□ -0.92
TRAV12-3-201ENST00000390442 C16orf71Q8IYS4 520 aaPredicted RBP9.3□□□□□ -0.92
TRAV12-3-201ENST00000390442 CCDC82Q8N4S0 544 aa9.3□□□□□ -0.92
TRAV12-3-201ENST00000390442 TRIM35Q9UPQ4 493 aa9.3□□□□□ -0.92
TRAV12-3-201ENST00000390442 KIAA1551Q9HCM1 1747 aa9.3□□□□□ -0.92
TRAV12-3-201ENST00000390442 ARHGAP27Q6ZUM4 889 aa9.29□□□□□ -0.92
TRAV12-3-201ENST00000390442 DNAJC5GQ8N7S2 189 aa9.29□□□□□ -0.92
TRAV12-3-201ENST00000390442 THUMPD2Q9BTF0 503 aaKnown RBP9.29□□□□□ -0.92
TRAV12-3-201ENST00000390442 NMRK2Q9NPI5 230 aa9.29□□□□□ -0.92
TRAV12-3-201ENST00000390442 PRAMEF22A3QJZ6 481 aa9.28□□□□□ -0.92
TRAV12-3-201ENST00000390442 RPS6KA4O75676 772 aa9.28□□□□□ -0.92
TRAV12-3-201ENST00000390442 CRKLP46109 303 aaKnown RBP9.28□□□□□ -0.92
TRAV12-3-201ENST00000390442 TGFB2P61812 414 aa9.28□□□□□ -0.92
TRAV12-3-201ENST00000390442 PPP1R15BQ5SWA1 713 aa9.28□□□□□ -0.92
TRAV12-3-201ENST00000390442 CCDC146Q8IYE0 955 aa9.28□□□□□ -0.92
TRAV12-3-201ENST00000390442 NECTIN2Q92692 538 aa9.28□□□□□ -0.92
TRAV12-3-201ENST00000390442 C10orf71Q711Q0 1435 aa9.28□□□□□ -0.92
TRAV12-3-201ENST00000390442 PCNTO95613 3336 aa9.28□□□□□ -0.92
TRAV12-3-201ENST00000390442 A0A0G2JLW4 131 aa9.27□□□□□ -0.93
TRAV12-3-201ENST00000390442 BTBD11A6QL63 1104 aa9.27□□□□□ -0.93
TRAV12-3-201ENST00000390442 HTRA3P83110 453 aa9.27□□□□□ -0.93
TRAV12-3-201ENST00000390442 TEFQ10587 303 aa9.27□□□□□ -0.93
TRAV12-3-201ENST00000390442 TAF7Q15545 349 aaPredicted RBP9.27□□□□□ -0.93
TRAV12-3-201ENST00000390442 PARP9Q8IXQ6 854 aa9.27□□□□□ -0.93
TRAV12-3-201ENST00000390442 RBM46Q8TBY0 533 aaKnown RBP9.27□□□□□ -0.93
TRAV12-3-201ENST00000390442 CCDC102AQ96A19 550 aa9.27□□□□□ -0.93
TRAV12-3-201ENST00000390442 RUNDC1Q96C34 613 aa9.27□□□□□ -0.93
TRAV12-3-201ENST00000390442 KLRG1Q96E93 195 aa9.27□□□□□ -0.93
TRAV12-3-201ENST00000390442 MIS18AQ9NYP9 233 aa9.27□□□□□ -0.93
TRAV12-3-201ENST00000390442 BRCA1P38398 1863 aaKnown RBP9.27□□□□□ -0.93
TRAV12-3-201ENST00000390442 SOS1Q07889 1333 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms