RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 RNMTO43148 476 aaKnown RBP21.32■■□□□ 1
SQSTM1-202ENST00000389805 SRGAP3O43295 1099 aa21.32■■□□□ 1
SQSTM1-202ENST00000389805 KRT28Q7Z3Y7 464 aa21.32■■□□□ 1
SQSTM1-202ENST00000389805 SOS1Q07889 1333 aaPredicted RBP21.32■■□□□ 1
SQSTM1-202ENST00000389805 BEND3Q5T5X7 828 aa21.31■■□□□ 1
SQSTM1-202ENST00000389805 SSH3Q8TE77 659 aa21.31■■□□□ 1
SQSTM1-202ENST00000389805 DNAAF4Q8WXU2 420 aa21.31■■□□□ 1
SQSTM1-202ENST00000389805 NPHP4O75161 1426 aaPredicted RBP21.31■■□□□ 1
SQSTM1-202ENST00000389805 PXDNQ92626 1479 aa21.31■■□□□ 1
SQSTM1-202ENST00000389805 C1orf141Q5JVX7 400 aa21.31■■□□□ 1
SQSTM1-202ENST00000389805 UTP14CQ5TAP6 766 aaKnown RBP21.3■■□□□ 1
SQSTM1-202ENST00000389805 ESYT1Q9BSJ8 1104 aa21.3■■□□□ 1
SQSTM1-202ENST00000389805 IL25Q9H293 177 aa21.3■■□□□ 1
SQSTM1-202ENST00000389805 PIBF1Q8WXW3 757 aa21.29■■□□□ 1
SQSTM1-202ENST00000389805 PALD1Q9ULE6 856 aa21.29■■□□□ 1
SQSTM1-202ENST00000389805 CHMLP26374 656 aa21.29■■□□□ 1
SQSTM1-202ENST00000389805 ANO2Q9NQ90 1003 aa21.28■■□□□ 1
SQSTM1-202ENST00000389805 KIF3AQ9Y496 699 aa21.28■■□□□ 1
SQSTM1-202ENST00000389805 ADCY5O95622 1261 aa21.27■■□□□ 1
SQSTM1-202ENST00000389805 AMOTQ4VCS5 1084 aa21.27■■□□□ 1
SQSTM1-202ENST00000389805 PRIMPOLQ96LW4 560 aa21.27■■□□□ 1
SQSTM1-202ENST00000389805 BCL2L12Q9HB09 334 aa21.27■■□□□ 1
SQSTM1-202ENST00000389805 ADCY9O60503 1353 aa21.27■■□□□ 1
SQSTM1-202ENST00000389805 BRD1O95696 1058 aa21.27■□□□□ 0.99
SQSTM1-202ENST00000389805 RHPN1Q8TCX5 695 aa21.27■□□□□ 0.99
SQSTM1-202ENST00000389805 STAP2Q9UGK3 403 aa21.27■□□□□ 0.99
SQSTM1-202ENST00000389805 CACNA1FO60840 1977 aa21.27■□□□□ 0.99
SQSTM1-202ENST00000389805 GIGYF1O75420 1035 aaPredicted RBP21.26■□□□□ 0.99
SQSTM1-202ENST00000389805 HCLS1P14317 486 aaPredicted RBP21.26■□□□□ 0.99
SQSTM1-202ENST00000389805 HMGN5P82970 282 aaKnown RBP21.26■□□□□ 0.99
SQSTM1-202ENST00000389805 POLA2Q14181 598 aa21.26■□□□□ 0.99
SQSTM1-202ENST00000389805 SYAP1Q96A49 352 aaPredicted RBP21.26■□□□□ 0.99
SQSTM1-202ENST00000389805 MAP3K2Q9Y2U5 619 aa21.26■□□□□ 0.99
SQSTM1-202ENST00000389805 CWF19L2Q2TBE0 894 aaKnown RBP21.25■□□□□ 0.99
SQSTM1-202ENST00000389805 SLC39A6Q13433 755 aa21.25■□□□□ 0.99
SQSTM1-202ENST00000389805 USP48Q86UV5 1035 aa21.25■□□□□ 0.99
SQSTM1-202ENST00000389805 DBF4Q9UBU7 674 aaPredicted RBP21.24■□□□□ 0.99
SQSTM1-202ENST00000389805 HOXB7P09629 217 aa21.24■□□□□ 0.99
SQSTM1-202ENST00000389805 AIMP1Q12904 312 aaKnown RBP21.24■□□□□ 0.99
SQSTM1-202ENST00000389805 CABLES1Q8TDN4 633 aa21.24■□□□□ 0.99
SQSTM1-202ENST00000389805 PXDNLA1KZ92 1463 aa21.23■□□□□ 0.99
SQSTM1-202ENST00000389805 MED1Q15648 1581 aaPredicted RBP21.23■□□□□ 0.99
SQSTM1-202ENST00000389805 U2AF2P26368 475 aaKnown RBP eCLIP21.23■□□□□ 0.994e-10■□□□□ 10.9
SQSTM1-202ENST00000389805 PDCL2Q8N4E4 241 aa21.22■□□□□ 0.99
SQSTM1-202ENST00000389805 UPF3BQ9BZI7 483 aaKnown RBP21.22■□□□□ 0.99
SQSTM1-202ENST00000389805 NLRP2Q9NX02 1062 aa21.22■□□□□ 0.99
SQSTM1-202ENST00000389805 PA2G4Q9UQ80 394 aaKnown RBP21.22■□□□□ 0.99
SQSTM1-202ENST00000389805 C9orf78Q9NZ63 289 aaPredicted RBP21.21■□□□□ 0.99
SQSTM1-202ENST00000389805 PI4K2BQ8TCG2 481 aa21.21■□□□□ 0.99
SQSTM1-202ENST00000389805 ZNF142P52746 1687 aaPredicted RBP21.21■□□□□ 0.99
SQSTM1-202ENST00000389805 C19orf44Q9H6X5 657 aa21.21■□□□□ 0.99
SQSTM1-202ENST00000389805 RAB11FIP3O75154 756 aa21.2■□□□□ 0.98
SQSTM1-202ENST00000389805 OS9Q13438 667 aaPredicted RBP21.2■□□□□ 0.98
SQSTM1-202ENST00000389805 ERBB3P21860 1342 aa21.2■□□□□ 0.98
SQSTM1-202ENST00000389805 DTNBO60941 627 aa21.2■□□□□ 0.98
SQSTM1-202ENST00000389805 GTF2F1P35269 517 aaKnown RBP eCLIP21.2■□□□□ 0.981e-7■■■■□ 24.5
SQSTM1-202ENST00000389805 KIF1BPQ96EK5 621 aa21.2■□□□□ 0.98
SQSTM1-202ENST00000389805 PHF14O94880 888 aa21.19■□□□□ 0.98
SQSTM1-202ENST00000389805 SPC24Q8NBT2 197 aa21.19■□□□□ 0.98
SQSTM1-202ENST00000389805 GTPBP4Q9BZE4 634 aaKnown RBP21.19■□□□□ 0.98
SQSTM1-202ENST00000389805 KDM3BQ7LBC6 1761 aa21.19■□□□□ 0.98
SQSTM1-202ENST00000389805 RIOK3O14730 519 aaKnown RBP21.18■□□□□ 0.98
SQSTM1-202ENST00000389805 BCL11BQ9C0K0 894 aaPredicted RBP21.18■□□□□ 0.98
SQSTM1-202ENST00000389805 C1orf167Q5SNV9 1468 aa21.18■□□□□ 0.98
SQSTM1-202ENST00000389805 CHRNA2Q15822 529 aa21.18■□□□□ 0.98
SQSTM1-202ENST00000389805 KSR2Q6VAB6 950 aa21.18■□□□□ 0.98
SQSTM1-202ENST00000389805 ADAMTSL3P82987 1691 aa21.18■□□□□ 0.98
SQSTM1-202ENST00000389805 PIP4K2AP48426 406 aaPredicted RBP21.18■□□□□ 0.98
SQSTM1-202ENST00000389805 FGD1P98174 961 aa21.18■□□□□ 0.98
SQSTM1-202ENST00000389805 PYCARDQ9ULZ3 195 aa21.18■□□□□ 0.98
SQSTM1-202ENST00000389805 NFATC2IPQ8NCF5 419 aa21.17■□□□□ 0.98
SQSTM1-202ENST00000389805 SLIT3O75094 1523 aa21.17■□□□□ 0.98
SQSTM1-202ENST00000389805 MYL6BP14649 208 aa21.17■□□□□ 0.98
SQSTM1-202ENST00000389805 CNPY2Q9Y2B0 182 aa21.17■□□□□ 0.98
SQSTM1-202ENST00000389805 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.17■□□□□ 0.98
SQSTM1-202ENST00000389805 LMO7Q8WWI1 1683 aa21.17■□□□□ 0.98
SQSTM1-202ENST00000389805 LARP6Q9BRS8 491 aaKnown RBP21.16■□□□□ 0.98
SQSTM1-202ENST00000389805 RAPGEF4Q8WZA2 1011 aa21.16■□□□□ 0.98
SQSTM1-202ENST00000389805 MCCP23508 829 aa21.15■□□□□ 0.98
SQSTM1-202ENST00000389805 PDIA6Q15084 440 aa21.15■□□□□ 0.98
SQSTM1-202ENST00000389805 HEG1Q9ULI3 1381 aa21.15■□□□□ 0.98
SQSTM1-202ENST00000389805 RGPD5Q99666 1765 aa21.15■□□□□ 0.98
SQSTM1-202ENST00000389805 TUBGCP6Q96RT7 1819 aa21.15■□□□□ 0.98
SQSTM1-202ENST00000389805 FAM184AQ8NB25 1140 aa21.15■□□□□ 0.98
SQSTM1-202ENST00000389805 TCHHQ07283 1943 aa21.14■□□□□ 0.98
SQSTM1-202ENST00000389805 CUL4AQ13619 759 aa21.14■□□□□ 0.97
SQSTM1-202ENST00000389805 UVSSAQ2YD98 709 aa21.14■□□□□ 0.97
SQSTM1-202ENST00000389805 GIMAP6Q6P9H5 292 aa21.14■□□□□ 0.97
SQSTM1-202ENST00000389805 CWC27Q6UX04 472 aaKnown RBP21.14■□□□□ 0.97
SQSTM1-202ENST00000389805 CHMP4AQ9BY43 222 aa21.14■□□□□ 0.97
SQSTM1-202ENST00000389805 SPTLC3Q9NUV7 552 aa21.14■□□□□ 0.97
SQSTM1-202ENST00000389805 NCAPD2Q15021 1401 aa21.14■□□□□ 0.97
SQSTM1-202ENST00000389805 KIF20AO95235 890 aa21.14■□□□□ 0.97
SQSTM1-202ENST00000389805 ATF3P18847 181 aa21.14■□□□□ 0.97
SQSTM1-202ENST00000389805 ZNF790Q6PG37 636 aa21.14■□□□□ 0.97
SQSTM1-202ENST00000389805 KAZALD1Q96I82 304 aa21.14■□□□□ 0.97
SQSTM1-202ENST00000389805 AP5Z1O43299 807 aa21.13■□□□□ 0.97
SQSTM1-202ENST00000389805 CSB-PGBD3P0DP91 1061 aa21.13■□□□□ 0.97
SQSTM1-202ENST00000389805 CCDC183Q5T5S1 534 aa21.13■□□□□ 0.97
SQSTM1-202ENST00000389805 BBXQ8WY36 941 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms