RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 RTEL1-TNFRSF6BF6WH68 1400 aa17.9■□□□□ 0.46
ALK-201ENST00000389048 TMEM266Q2M3C6 531 aa17.9■□□□□ 0.46
ALK-201ENST00000389048 CUL5Q93034 780 aa17.9■□□□□ 0.46
ALK-201ENST00000389048 AFMP43652 599 aa17.89■□□□□ 0.45
ALK-201ENST00000389048 MPRIPQ6WCQ1 1025 aa17.89■□□□□ 0.45
ALK-201ENST00000389048 PPP1R14CQ8TAE6 165 aa17.89■□□□□ 0.45
ALK-201ENST00000389048 A0A1W2PRG0 241 aa17.89■□□□□ 0.45
ALK-201ENST00000389048 MXRA7P84157 204 aa17.89■□□□□ 0.45
ALK-201ENST00000389048 SMIM23A6NLE4 172 aa17.89■□□□□ 0.45
ALK-201ENST00000389048 PTGS1P23219 599 aa17.89■□□□□ 0.45
ALK-201ENST00000389048 LRRC2Q9BYS8 371 aa17.89■□□□□ 0.45
ALK-201ENST00000389048 GNG11P61952 73 aa17.89■□□□□ 0.45
ALK-201ENST00000389048 DDX23Q9BUQ8 820 aaKnown RBP17.89■□□□□ 0.45
ALK-201ENST00000389048 MICU3Q86XE3 530 aa17.88■□□□□ 0.45
ALK-201ENST00000389048 GOLIM4O00461 696 aa17.88■□□□□ 0.45
ALK-201ENST00000389048 ANKRD30BQ9BXX2 1392 aa17.88■□□□□ 0.45
ALK-201ENST00000389048 GTF2A1P52655 376 aaPredicted RBP17.88■□□□□ 0.45
ALK-201ENST00000389048 ERBINQ96RT1 1412 aa17.88■□□□□ 0.45
ALK-201ENST00000389048 MCM3P25205 808 aa17.88■□□□□ 0.45
ALK-201ENST00000389048 MNAT1P51948 309 aa17.88■□□□□ 0.45
ALK-201ENST00000389048 PPARDQ03181 441 aa17.88■□□□□ 0.45
ALK-201ENST00000389048 NECAB1Q8N987 351 aa17.88■□□□□ 0.45
ALK-201ENST00000389048 SLC26A6Q9BXS9 759 aa17.88■□□□□ 0.45
ALK-201ENST00000389048 RSPH14Q9UHP6 348 aa17.88■□□□□ 0.45
ALK-201ENST00000389048 SLFN5Q08AF3 891 aa17.87■□□□□ 0.45
ALK-201ENST00000389048 TMEM87AQ8NBN3 555 aa17.87■□□□□ 0.45
ALK-201ENST00000389048 BBXQ8WY36 941 aaPredicted RBP17.87■□□□□ 0.45
ALK-201ENST00000389048 PPM1EQ8WY54 764 aa17.87■□□□□ 0.45
ALK-201ENST00000389048 FSD2A1L4K1 749 aa17.87■□□□□ 0.45
ALK-201ENST00000389048 NFE2L2Q16236 605 aa17.87■□□□□ 0.45
ALK-201ENST00000389048 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
ALK-201ENST00000389048 SCAND2PQ9GZW5 306 aaPredicted RBP17.87■□□□□ 0.45
ALK-201ENST00000389048 ZPR1O75312 459 aa17.87■□□□□ 0.45
ALK-201ENST00000389048 GLRX3O76003 335 aaKnown RBP17.87■□□□□ 0.45
ALK-201ENST00000389048 STX1AQ16623 288 aa17.87■□□□□ 0.45
ALK-201ENST00000389048 DPH6Q7L8W6 267 aa17.87■□□□□ 0.45
ALK-201ENST00000389048 HSF2BPO75031 334 aa17.86■□□□□ 0.45
ALK-201ENST00000389048 BICD1Q96G01 975 aa17.86■□□□□ 0.45
ALK-201ENST00000389048 NSD3Q9BZ95 1437 aa17.86■□□□□ 0.45
ALK-201ENST00000389048 KIF2AO00139 706 aaPredicted RBP17.86■□□□□ 0.45
ALK-201ENST00000389048 IGSF3O75054 1194 aa17.86■□□□□ 0.45
ALK-201ENST00000389048 AKAP2Q9Y2D5 859 aa17.86■□□□□ 0.45
ALK-201ENST00000389048 ARID5AQ03989 594 aa17.86■□□□□ 0.45
ALK-201ENST00000389048 SSH1Q8WYL5 1049 aa17.86■□□□□ 0.45
ALK-201ENST00000389048 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
ALK-201ENST00000389048 TMEM67Q5HYA8 995 aa17.85■□□□□ 0.45
ALK-201ENST00000389048 STARD3NLO95772 234 aa17.85■□□□□ 0.45
ALK-201ENST00000389048 TRMT112Q9UI30 125 aaKnown RBP17.85■□□□□ 0.45
ALK-201ENST00000389048 USP16Q9Y5T5 823 aa17.85■□□□□ 0.45
ALK-201ENST00000389048 DNAJC21Q5F1R6 531 aaKnown RBP17.85■□□□□ 0.45
ALK-201ENST00000389048 LIMCH1Q9UPQ0 1083 aa17.85■□□□□ 0.45
ALK-201ENST00000389048 CATIPQ7Z7H3 387 aa17.85■□□□□ 0.45
ALK-201ENST00000389048 HCLS1P14317 486 aaPredicted RBP17.85■□□□□ 0.45
ALK-201ENST00000389048 ZSCAN23Q3MJ62 389 aa17.85■□□□□ 0.45
ALK-201ENST00000389048 GRIPAP1Q4V328 841 aa17.85■□□□□ 0.45
ALK-201ENST00000389048 IQCA1Q86XH1 822 aa17.85■□□□□ 0.45
ALK-201ENST00000389048 FBF1Q8TES7 1133 aa17.85■□□□□ 0.45
ALK-201ENST00000389048 CAPZA3Q96KX2 299 aa17.85■□□□□ 0.45
ALK-201ENST00000389048 TAOK3Q9H2K8 898 aa17.85■□□□□ 0.45
ALK-201ENST00000389048 ZBTB3Q9H5J0 574 aa17.85■□□□□ 0.45
ALK-201ENST00000389048 MCM6Q14566 821 aa17.84■□□□□ 0.45
ALK-201ENST00000389048 GIGYF2Q6Y7W6 1299 aaKnown RBP17.84■□□□□ 0.45
ALK-201ENST00000389048 CEP112Q8N8E3 955 aa17.84■□□□□ 0.45
ALK-201ENST00000389048 TMOD3Q9NYL9 352 aa17.84■□□□□ 0.45
ALK-201ENST00000389048 ATP5J2-PTCD1G3V325 749 aa17.84■□□□□ 0.45
ALK-201ENST00000389048 MAP3K12Q12852 859 aa17.84■□□□□ 0.45
ALK-201ENST00000389048 CALML4Q96GE6 196 aa17.84■□□□□ 0.45
ALK-201ENST00000389048 FGFR1OPO95684 399 aaKnown RBP17.84■□□□□ 0.45
ALK-201ENST00000389048 FERP16591 822 aa17.84■□□□□ 0.45
ALK-201ENST00000389048 AKNAD1Q5T1N1 836 aa17.84■□□□□ 0.45
ALK-201ENST00000389048 TCEANC2Q96MN5 208 aa17.84■□□□□ 0.45
ALK-201ENST00000389048 KIF20AO95235 890 aa17.84■□□□□ 0.45
ALK-201ENST00000389048 MRPS9P82933 396 aaKnown RBP17.84■□□□□ 0.45
ALK-201ENST00000389048 IFIT5Q13325 482 aaKnown RBP17.84■□□□□ 0.45
ALK-201ENST00000389048 STX6O43752 255 aa17.83■□□□□ 0.45
ALK-201ENST00000389048 WAPLQ7Z5K2 1190 aa17.83■□□□□ 0.45
ALK-201ENST00000389048 OTUD6BQ8N6M0 293 aa17.83■□□□□ 0.45
ALK-201ENST00000389048 UBE2Q2Q8WVN8 375 aa17.83■□□□□ 0.45
ALK-201ENST00000389048 NAA15Q9BXJ9 866 aaKnown RBP17.83■□□□□ 0.45
ALK-201ENST00000389048 HYPKQ9NX55 129 aa17.83■□□□□ 0.45
ALK-201ENST00000389048 CNPY2Q9Y2B0 182 aa17.83■□□□□ 0.45
ALK-201ENST00000389048 SELENOSQ9BQE4 189 aa17.83■□□□□ 0.44
ALK-201ENST00000389048 TRIM47Q96LD4 638 aa17.83■□□□□ 0.44
ALK-201ENST00000389048 CADPSQ9ULU8 1353 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 SLC5A1P13866 664 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 DNAAF4Q8WXU2 420 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 IKBKGQ9Y6K9 419 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 CUX1P39880 1505 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 ZNF287Q9HBT7 754 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 NCOA2Q15596 1464 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 ADAMTS2O95450 1211 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 RRAGBQ5VZM2 374 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 SPECC1LQ69YQ0 1117 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 TBC1D9Q6ZT07 1266 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 KRT13P13646 458 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 CCDC63Q8NA47 563 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 WWC3Q9ULE0 1092 aa17.82■□□□□ 0.44
ALK-201ENST00000389048 BAG4O95429 457 aaKnown RBP17.81■□□□□ 0.44
ALK-201ENST00000389048 ZNF165P49910 485 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms