RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 LAMC1P11047 1609 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 TOM1O60784 492 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 TUBB4AP04350 444 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 UBE2HP62256 183 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 SSH1Q8WYL5 1049 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 NAT10Q9H0A0 1025 aaKnown RBP6.67□□□□□ -1.34
RFC1-202ENST00000381897 RLBP1P12271 317 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 PDCP20941 246 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 GGT6Q6P531 493 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 RPAP2Q8IXW5 612 aaPredicted RBP6.67□□□□□ -1.34
RFC1-202ENST00000381897 AFAP1Q8N556 730 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 RUFY2Q8WXA3 655 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 JDP2Q8WYK2 163 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 LTV1Q96GA3 475 aaPredicted RBP6.67□□□□□ -1.34
RFC1-202ENST00000381897 BCL2L12Q9HB09 334 aa6.67□□□□□ -1.34
RFC1-202ENST00000381897 NUP153P49790 1475 aaKnown RBP6.66□□□□□ -1.34
RFC1-202ENST00000381897 ANKRD36BQ8N2N9 1353 aa6.66□□□□□ -1.34
RFC1-202ENST00000381897 MX1P20591 662 aa6.66□□□□□ -1.34
RFC1-202ENST00000381897 ZNF467Q7Z7K2 595 aaPredicted RBP6.66□□□□□ -1.34
RFC1-202ENST00000381897 ARHGAP45Q92619 1136 aa6.66□□□□□ -1.34
RFC1-202ENST00000381897 INTS4Q96HW7 963 aaKnown RBP6.66□□□□□ -1.34
RFC1-202ENST00000381897 GPATCH3Q96I76 525 aa6.66□□□□□ -1.34
RFC1-202ENST00000381897 KIF18AQ8NI77 898 aa6.66□□□□□ -1.34
RFC1-202ENST00000381897 DHX38Q92620 1227 aaKnown RBP6.66□□□□□ -1.34
RFC1-202ENST00000381897 TSR2Q969E8 191 aaKnown RBP6.66□□□□□ -1.34
RFC1-202ENST00000381897 NSD3Q9BZ95 1437 aa6.66□□□□□ -1.34
RFC1-202ENST00000381897 FOSP01100 380 aaPredicted RBP6.66□□□□□ -1.34
RFC1-202ENST00000381897 PTPN14Q15678 1187 aa6.66□□□□□ -1.34
RFC1-202ENST00000381897 MAP3K11Q16584 847 aa6.66□□□□□ -1.34
RFC1-202ENST00000381897 TTC22Q5TAA0 569 aa6.66□□□□□ -1.34
RFC1-202ENST00000381897 HDGFL1Q5TGJ6 251 aa6.66□□□□□ -1.34
RFC1-202ENST00000381897 FERMT3Q86UX7 667 aa6.66□□□□□ -1.34
RFC1-202ENST00000381897 FKBP5Q13451 457 aaPredicted RBP6.65□□□□□ -1.34
RFC1-202ENST00000381897 TMCO3Q6UWJ1 677 aa6.65□□□□□ -1.34
RFC1-202ENST00000381897 RILPL2Q969X0 211 aa6.65□□□□□ -1.34
RFC1-202ENST00000381897 NUP62CLQ9H1M0 184 aa6.65□□□□□ -1.34
RFC1-202ENST00000381897 ZC3H6P61129 1189 aaKnown RBP6.65□□□□□ -1.34
RFC1-202ENST00000381897 IFRD2Q12894 506 aaPredicted RBP6.65□□□□□ -1.34
RFC1-202ENST00000381897 PPP2R5EQ16537 467 aa6.65□□□□□ -1.34
RFC1-202ENST00000381897 HOMER1Q86YM7 354 aa6.65□□□□□ -1.34
RFC1-202ENST00000381897 UBXN4Q92575 508 aa6.65□□□□□ -1.34
RFC1-202ENST00000381897 ZBTB40Q9NUA8 1239 aa6.65□□□□□ -1.34
RFC1-202ENST00000381897 REREQ9P2R6 1566 aa6.65□□□□□ -1.34
RFC1-202ENST00000381897 ZSCAN31Q96LW9 406 aaPredicted RBP6.65□□□□□ -1.35
RFC1-202ENST00000381897 SRCIN1Q9C0H9 1055 aa6.65□□□□□ -1.35
RFC1-202ENST00000381897 TNMDQ9H2S6 317 aa6.65□□□□□ -1.35
RFC1-202ENST00000381897 DEF6Q9H4E7 631 aa6.65□□□□□ -1.35
RFC1-202ENST00000381897 NLRP1Q9C000 1473 aa6.65□□□□□ -1.35
RFC1-202ENST00000381897 FIBPO43427 364 aa6.65□□□□□ -1.35
RFC1-202ENST00000381897 RDXP35241 583 aaKnown RBP6.65□□□□□ -1.35
RFC1-202ENST00000381897 KRT85P78386 507 aa6.65□□□□□ -1.35
RFC1-202ENST00000381897 CEP135Q66GS9 1140 aa6.65□□□□□ -1.35
RFC1-202ENST00000381897 FLCNQ8NFG4 579 aa6.65□□□□□ -1.35
RFC1-202ENST00000381897 BICD2Q8TD16 824 aa6.65□□□□□ -1.35
RFC1-202ENST00000381897 A2MP01023 1474 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 USP8P40818 1118 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 TMPOP42166 694 aaKnown RBP6.64□□□□□ -1.35
RFC1-202ENST00000381897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.64□□□□□ -1.35
RFC1-202ENST00000381897 THEMISQ8N1K5 641 aaPredicted RBP6.64□□□□□ -1.35
RFC1-202ENST00000381897 PPM1EQ8WY54 764 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 TRPM1Q7Z4N2 1603 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 GRIN2AQ12879 1464 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 HOXA2O43364 376 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 SLC4A2P04920 1241 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 ZKSCAN1P17029 563 aaPredicted RBP6.64□□□□□ -1.35
RFC1-202ENST00000381897 PSMD2Q13200 908 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 RDH13Q8NBN7 331 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 RTF1Q92541 710 aaKnown RBP6.64□□□□□ -1.35
RFC1-202ENST00000381897 TTC12Q9H892 705 aaPredicted RBP6.64□□□□□ -1.35
RFC1-202ENST00000381897 EVLQ9UI08 416 aaPredicted RBP6.64□□□□□ -1.35
RFC1-202ENST00000381897 KIF3BO15066 747 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 U2AF2P26368 475 aaKnown RBP eCLIP6.64□□□□□ -1.35
RFC1-202ENST00000381897 ERCC4Q92889 916 aaPredicted RBP6.64□□□□□ -1.35
RFC1-202ENST00000381897 RBM33Q96EV2 1170 aaKnown RBP6.64□□□□□ -1.35
RFC1-202ENST00000381897 HDAC5Q9UQL6 1122 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 KDM5AP29375 1690 aaKnown RBP6.64□□□□□ -1.35
RFC1-202ENST00000381897 VPS37CA5D8V6 355 aaPredicted RBP6.64□□□□□ -1.35
RFC1-202ENST00000381897 LGR5O75473 907 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 HSP90B2PQ58FF3 399 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 SPOUT1Q5T280 376 aaKnown RBP6.64□□□□□ -1.35
RFC1-202ENST00000381897 TRAIPQ9BWF2 469 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 STK31Q9BXU1 1019 aa6.64□□□□□ -1.35
RFC1-202ENST00000381897 EIF3JO75822 258 aaKnown RBP6.63□□□□□ -1.35
RFC1-202ENST00000381897 ZSCAN20P17040 1043 aaPredicted RBP6.63□□□□□ -1.35
RFC1-202ENST00000381897 DDIT3P35638 169 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 RPAINQ86UA6 219 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 FAM200AQ8TCP9 573 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 C16orf45Q96MC5 204 aaPredicted RBP6.63□□□□□ -1.35
RFC1-202ENST00000381897 V9GYY5 206 aaPredicted RBP6.63□□□□□ -1.35
RFC1-202ENST00000381897 HCLS1P14317 486 aaPredicted RBP6.63□□□□□ -1.35
RFC1-202ENST00000381897 GSDMDP57764 484 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 PRKG1Q13976 671 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 MPNDQ8N594 471 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 ARHGEF1Q92888 912 aaKnown RBP6.63□□□□□ -1.35
RFC1-202ENST00000381897 TMX3Q96JJ7 454 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 FAM107BQ9H098 131 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 CEP83Q9Y592 693 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 ARHGAP5Q13017 1502 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 DISP1Q96F81 1524 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 PBRM1Q86U86 1689 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms