RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 BMP15O95972 392 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 SFPQP23246 707 aaKnown RBP eCLIP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 ARHGEF40Q8TER5 1519 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 POLR3AO14802 1390 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 SF3A1Q15459 793 aaKnown RBP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 WASF1Q92558 559 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 RSRC1Q96IZ7 334 aaKnown RBP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 PPP1R9BQ96SB3 815 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 CCT4P50991 539 aaKnown RBP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 UBE2HP62256 183 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 FKBP5Q13451 457 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 TRIM29Q14134 588 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 HSP90AB3PQ58FF7 597 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 CPLX1O14810 134 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 BBXQ8WY36 941 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 GFM2Q969S9 779 aaKnown RBP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 CCDC102AQ96A19 550 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 ERO1AQ96HE7 468 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 PPLO60437 1756 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 OPA1O60313 960 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 SLC3A2P08195 630 aaKnown RBP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 SLC8A1P32418 973 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 CABP4P57796 275 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 MAP3K11Q16584 847 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 STX1AQ16623 288 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 WASHC4Q2M389 1173 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 NFXL1Q6ZNB6 911 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 MOV10L1Q9BXT6 1211 aaKnown RBP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 HMG20BQ9P0W2 317 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 PTPRCP08575 1304 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 APOBRQ0VD83 1088 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 MVPQ14764 893 aaKnown RBP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 NAA15Q9BXJ9 866 aaKnown RBP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 TSPYL4Q9UJ04 414 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 ELL2O00472 640 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-203ENST00000381196 TXLNAP40222 546 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 FCHSD1Q86WN1 690 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 NECTIN2Q92692 538 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 SMC3Q9UQE7 1217 aa5.66□□□□□ -1.5
PTPRD-203ENST00000381196 H3BQV1 296 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 TNNT1P13805 278 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 GBP1P32455 592 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 IFFO2Q5TF58 517 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 AFAP1Q8N556 730 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 FMNL2Q96PY5 1086 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 CTAGE1Q96RT6 745 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 RRP7AQ9Y3A4 280 aaKnown RBP5.65□□□□□ -1.5
PTPRD-203ENST00000381196 CLTCL1P53675 1640 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 RIMS2Q9UQ26 1411 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 KANK3Q6NY19 840 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 SEPT11Q9NVA2 429 aaKnown RBP5.65□□□□□ -1.5
PTPRD-203ENST00000381196 TBC1D2BQ9UPU7 963 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 FSD2A1L4K1 749 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 XBP1P17861 261 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 HECW2Q9P2P5 1572 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 FAM135BQ49AJ0 1406 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 GTF2A1P52655 376 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-203ENST00000381196 BRPF3Q9ULD4 1205 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 STIM1Q13586 685 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 PTPN14Q15678 1187 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 DYDC1Q8WWB3 177 aa5.65□□□□□ -1.5
PTPRD-203ENST00000381196 CDC25BP30305 580 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 SLC4A3P48751 1232 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 NT5C2P49902 561 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 PPP2R5EQ16537 467 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 ODF2Q5BJF6 829 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 FAM114A1Q8IWE2 563 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 PIBF1Q8WXW3 757 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 RAB3GAP1Q15042 981 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 LRRCC1Q9C099 1032 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 ANO10Q9NW15 660 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 RP1L1Q8IWN7 2480 aaPredicted RBP5.65□□□□□ -1.51
PTPRD-203ENST00000381196 PLA2R1Q13018 1463 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 KCNJ6P48051 423 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 CLEC17AQ6ZS10 378 aa5.65□□□□□ -1.51
PTPRD-203ENST00000381196 RAB11FIP3O75154 756 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 NBPF8Q3BBV2 869 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 TTC31Q49AM3 519 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-203ENST00000381196 NBPF14Q5TI25 921 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 GAS2L2Q8NHY3 880 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 FAM200AQ8TCP9 573 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 NEUROD6Q96NK8 337 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 PSMD1Q99460 953 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 SLC52A1Q9NWF4 448 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 TRIM14Q14142 442 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 RPAP2Q8IXW5 612 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-203ENST00000381196 PLIN1O60240 522 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 RAPGEF3O95398 923 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 CRBNQ96SW2 442 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 ZSCAN16Q9H4T2 348 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-203ENST00000381196 MAP3K4Q9Y6R4 1608 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 PPIP5K1Q6PFW1 1433 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 ZFYVE16Q7Z3T8 1539 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 ZPR1O75312 459 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 PPP1R2P41236 205 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 ARFGAP3Q9NP61 516 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 ST20-MTHFSA0A0A6YYL1 179 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 NAA25Q14CX7 972 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 CNTROBQ8N137 903 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 SPAG1Q07617 926 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms