RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 DIP2BQ9P265 1576 aa11.23□□□□□ -0.61
NHLRC3-202ENST00000379600 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.22□□□□□ -0.61
NHLRC3-202ENST00000379600 SRGAP3O43295 1099 aa11.22□□□□□ -0.61
NHLRC3-202ENST00000379600 KCNB2Q92953 911 aa11.22□□□□□ -0.61
NHLRC3-202ENST00000379600 TMEM2Q9UHN6 1383 aa11.22□□□□□ -0.61
NHLRC3-202ENST00000379600 ME3Q16798 604 aa11.21□□□□□ -0.61
NHLRC3-202ENST00000379600 DDX54Q8TDD1 881 aaKnown RBP11.21□□□□□ -0.61
NHLRC3-202ENST00000379600 KDM3BQ7LBC6 1761 aa11.21□□□□□ -0.61
NHLRC3-202ENST00000379600 DMTNQ08495 405 aa11.21□□□□□ -0.62
NHLRC3-202ENST00000379600 CNTROBQ8N137 903 aa11.21□□□□□ -0.62
NHLRC3-202ENST00000379600 KIF1BPQ96EK5 621 aa11.21□□□□□ -0.62
NHLRC3-202ENST00000379600 ZSWIM6Q9HCJ5 1215 aa11.21□□□□□ -0.62
NHLRC3-202ENST00000379600 KIF3AQ9Y496 699 aa11.21□□□□□ -0.62
NHLRC3-202ENST00000379600 MED1Q15648 1581 aaPredicted RBP11.21□□□□□ -0.62
NHLRC3-202ENST00000379600 BEND3Q5T5X7 828 aa11.21□□□□□ -0.62
NHLRC3-202ENST00000379600 VPS53Q5VIR6 699 aa11.21□□□□□ -0.62
NHLRC3-202ENST00000379600 TTC6Q86TZ1 520 aa11.21□□□□□ -0.62
NHLRC3-202ENST00000379600 NECAB1Q8N987 351 aa11.21□□□□□ -0.62
NHLRC3-202ENST00000379600 SPC24Q8NBT2 197 aa11.21□□□□□ -0.62
NHLRC3-202ENST00000379600 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.21□□□□□ -0.62
NHLRC3-202ENST00000379600 TTC21AQ8NDW8 1320 aa11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 RIOK3O14730 519 aaKnown RBP11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 HDGFL1Q5TGJ6 251 aa11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 PRPF40BQ6NWY9 871 aaKnown RBP11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 JAKMIP1Q96N16 626 aaKnown RBP11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 LIG1P18858 919 aa11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 PLCB2Q00722 1185 aa11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 TAF7Q15545 349 aaPredicted RBP11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 PPP4R3BQ5MIZ7 849 aa11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 FAM173BQ6P4H8 233 aa11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 PDRG1Q9NUG6 133 aa11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 TPCN1Q9ULQ1 816 aa11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 MRVI1Q9Y6F6 885 aa11.2□□□□□ -0.62
NHLRC3-202ENST00000379600 AMPHP49418 695 aa11.19□□□□□ -0.62
NHLRC3-202ENST00000379600 NECTIN1Q15223 517 aa11.19□□□□□ -0.62
NHLRC3-202ENST00000379600 CBX1P83916 185 aa11.19□□□□□ -0.62
NHLRC3-202ENST00000379600 CDC37L1Q7L3B6 337 aa11.19□□□□□ -0.62
NHLRC3-202ENST00000379600 ANKRD7Q92527 254 aa11.19□□□□□ -0.62
NHLRC3-202ENST00000379600 ADCY9O60503 1353 aa11.19□□□□□ -0.62
NHLRC3-202ENST00000379600 CTIFO43310 598 aaKnown RBP11.19□□□□□ -0.62
NHLRC3-202ENST00000379600 LTKP29376 864 aa11.19□□□□□ -0.62
NHLRC3-202ENST00000379600 HOXC9P31274 260 aa11.19□□□□□ -0.62
NHLRC3-202ENST00000379600 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
NHLRC3-202ENST00000379600 ZHX1Q9UKY1 873 aaPredicted RBP11.19□□□□□ -0.62
NHLRC3-202ENST00000379600 TAF6LQ9Y6J9 622 aa11.19□□□□□ -0.62
NHLRC3-202ENST00000379600 PTGS1P23219 599 aa11.18□□□□□ -0.62
NHLRC3-202ENST00000379600 UTP14CQ5TAP6 766 aaKnown RBP11.18□□□□□ -0.62
NHLRC3-202ENST00000379600 ATP6V1DQ9Y5K8 247 aa11.18□□□□□ -0.62
NHLRC3-202ENST00000379600 LUZP1Q86V48 1076 aa11.18□□□□□ -0.62
NHLRC3-202ENST00000379600 TM6SF1Q9BZW5 370 aa11.18□□□□□ -0.62
NHLRC3-202ENST00000379600 CHPF2Q9P2E5 772 aa11.18□□□□□ -0.62
NHLRC3-202ENST00000379600 TTC41PQ6P2S7 1318 aa11.18□□□□□ -0.62
NHLRC3-202ENST00000379600 DIP2AQ14689 1571 aa11.18□□□□□ -0.62
NHLRC3-202ENST00000379600 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
NHLRC3-202ENST00000379600 USP54Q70EL1 1684 aa11.18□□□□□ -0.62
NHLRC3-202ENST00000379600 VPS37CA5D8V6 355 aaPredicted RBP11.18□□□□□ -0.62
NHLRC3-202ENST00000379600 PI4KAP2A4QPH2 592 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 KCNQ3O43525 872 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 ANXA1P04083 346 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 CAMK4Q16566 473 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 PI4KAP1Q8N8J0 262 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 BABAM1Q9NWV8 329 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 FAM69CQ0P6D2 419 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 LRMPQ12912 555 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 USHBP1Q8N6Y0 703 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 NRBP1Q9UHY1 535 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 NPHP4O75161 1426 aaPredicted RBP11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 GLRX3O76003 335 aaKnown RBP11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 CCDC192P0DO97 292 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 EIF4A1P60842 406 aaKnown RBP11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 TYRO3Q06418 890 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 FERMT3Q86UX7 667 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 FAM200AQ8TCP9 573 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 FAM227BQ96M60 508 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 SH2B1Q9NRF2 756 aaPredicted RBP11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 DIAPH3Q9NSV4 1193 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 CHMP3Q9Y3E7 222 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 CYP46A1Q9Y6A2 500 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 TNRQ92752 1358 aa11.17□□□□□ -0.62
NHLRC3-202ENST00000379600 EIF2S2P20042 333 aaKnown RBP11.16□□□□□ -0.62
NHLRC3-202ENST00000379600 CCDC171Q6TFL3 1326 aa11.16□□□□□ -0.62
NHLRC3-202ENST00000379600 PLEKHG1Q9ULL1 1385 aa11.16□□□□□ -0.62
NHLRC3-202ENST00000379600 MTX1Q13505 466 aa11.16□□□□□ -0.62
NHLRC3-202ENST00000379600 CREB3L3Q68CJ9 461 aa11.16□□□□□ -0.62
NHLRC3-202ENST00000379600 DNAAF4Q8WXU2 420 aa11.16□□□□□ -0.62
NHLRC3-202ENST00000379600 ZSCAN31Q96LW9 406 aaPredicted RBP11.16□□□□□ -0.62
NHLRC3-202ENST00000379600 PA2G4Q9UQ80 394 aaKnown RBP11.16□□□□□ -0.62
NHLRC3-202ENST00000379600 ELP1O95163 1332 aa11.16□□□□□ -0.62
NHLRC3-202ENST00000379600 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
NHLRC3-202ENST00000379600 NUTM2GQ5VZR2 741 aa11.15□□□□□ -0.62
NHLRC3-202ENST00000379600 LGR6Q9HBX8 967 aa11.15□□□□□ -0.62
NHLRC3-202ENST00000379600 CBX8Q9HC52 389 aa11.15□□□□□ -0.62
NHLRC3-202ENST00000379600 RBM8AQ9Y5S9 174 aaKnown RBP11.15□□□□□ -0.62
NHLRC3-202ENST00000379600 LTN1O94822 1766 aa11.15□□□□□ -0.62
NHLRC3-202ENST00000379600 U2AF2P26368 475 aaKnown RBP eCLIP11.15□□□□□ -0.624e-7■■■■□ 24.7
NHLRC3-202ENST00000379600 CKAP2LQ8IYA6 745 aa11.15□□□□□ -0.62
NHLRC3-202ENST00000379600 TCEANC2Q96MN5 208 aa11.15□□□□□ -0.62
NHLRC3-202ENST00000379600 SLC26A8Q96RN1 970 aa11.15□□□□□ -0.62
NHLRC3-202ENST00000379600 ECHDC1Q9NTX5 307 aa11.15□□□□□ -0.62
NHLRC3-202ENST00000379600 RGPD2P0DJD1 1756 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms