RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 TRAK2O60296 914 aa12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 CCDC40Q4G0X9 1142 aa12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 MTIF2P46199 727 aaKnown RBP12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 MXRA7P84157 204 aa12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 TTC16Q8NEE8 873 aa12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 TICAM2Q86XR7 235 aa12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 HAUS7Q99871 368 aa12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 PRPF4BQ13523 1007 aaKnown RBP12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 HDAC9Q9UKV0 1011 aa12.89□□□□□ -0.35
PTCHD1-201ENST00000379361 PLEKHH1Q9ULM0 1364 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 CLIP2Q9UDT6 1046 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 JAKMIP2Q96AA8 810 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 ST5P78524 1137 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 SH2B1Q9NRF2 756 aaPredicted RBP12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 PDE4BQ07343 736 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 MAP4K4O95819 1239 aaPredicted RBP12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 UQCRHP07919 91 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 SMC6Q96SB8 1091 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 CCDC155Q8N6L0 562 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 PPP1R9BQ96SB3 815 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 SWAP70Q9UH65 585 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 CFAP58Q5T655 872 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 RNF187Q5TA31 235 aaPredicted RBP12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 CCT6BQ92526 530 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 HAUS2Q9NVX0 235 aa12.88□□□□□ -0.35
PTCHD1-201ENST00000379361 WIZO95785 1651 aa12.87□□□□□ -0.35
PTCHD1-201ENST00000379361 NOB1Q9ULX3 412 aaKnown RBP12.87□□□□□ -0.35
PTCHD1-201ENST00000379361 KIF4BQ2VIQ3 1234 aa12.87□□□□□ -0.35
PTCHD1-201ENST00000379361 IFIT5Q13325 482 aaKnown RBP12.87□□□□□ -0.35
PTCHD1-201ENST00000379361 CCDC6Q16204 474 aa12.87□□□□□ -0.35
PTCHD1-201ENST00000379361 MINDY4BA8MYZ0 360 aa12.87□□□□□ -0.35
PTCHD1-201ENST00000379361 STX6O43752 255 aa12.87□□□□□ -0.35
PTCHD1-201ENST00000379361 CRCPO75575 148 aa12.87□□□□□ -0.35
PTCHD1-201ENST00000379361 CDC5LQ99459 802 aaKnown RBP12.87□□□□□ -0.35
PTCHD1-201ENST00000379361 SERPINA10Q9UK55 444 aa12.87□□□□□ -0.35
PTCHD1-201ENST00000379361 TOP1P11387 765 aaKnown RBP12.87□□□□□ -0.35
PTCHD1-201ENST00000379361 ERICH4A6NGS2 130 aa12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 ATP2A1O14983 1001 aa12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 TTF1Q15361 905 aaPredicted RBP12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 GGNBP2Q9H3C7 697 aa12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 TOP2AP11388 1531 aaKnown RBP12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 ALDH3A1P30838 453 aa12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 CUL4BQ13620 913 aa12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 PFDN4Q9NQP4 134 aa12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 PRKAR2BP31323 418 aa12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 GSTO1P78417 241 aa12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 ATP2A2P16615 1042 aaKnown RBP12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 PLS1Q14651 629 aa12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 PTPN14Q15678 1187 aa12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 CCDC144CPQ8IYA2 1237 aa12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 PRKCSHP14314 528 aaPredicted RBP12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
PTCHD1-201ENST00000379361 ZBTB16Q05516 673 aa12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 CCDC77Q9BR77 488 aa12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 SSRP1Q08945 709 aaKnown RBP12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 MAK16Q9BXY0 300 aaKnown RBP12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 SRGAP3O43295 1099 aa12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 MAATS1Q7Z4T9 603 aa12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 CCDC89Q8N998 374 aa12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 ZNF692Q9BU19 519 aaPredicted RBP12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 FAM114A2Q9NRY5 505 aa12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 K7ELQ4 463 aaPredicted RBP12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 SCAND2PQ9GZW5 306 aaPredicted RBP12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 TTC36A6NLP5 189 aa12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 C6orf229H3BNL8 230 aa12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 GOLGA6L9A6NEM1 432 aa12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 RPUSD2Q8IZ73 545 aaKnown RBP12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 C8orf76Q96K31 380 aa12.85□□□□□ -0.35
PTCHD1-201ENST00000379361 RP1P56715 2156 aa12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 KRT13P13646 458 aa12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 CKAP4Q07065 602 aaKnown RBP12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 KANK3Q6NY19 840 aa12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 KCNH5Q8NCM2 988 aa12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 FANCIQ9NVI1 1328 aa12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 LRPPRCP42704 1394 aaKnown RBP12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 TXNDC16Q9P2K2 825 aa12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 BRD4O60885 1362 aaPredicted RBP12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 FILIP1Q7Z7B0 1213 aa12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 ZGPATQ8N5A5 531 aaKnown RBP12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 GOLGA8BA8MQT2 603 aa12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 BIN2Q9UBW5 565 aaPredicted RBP12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 PHACTR2O75167 634 aa12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 RAB11FIP3O75154 756 aa12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 GRM1Q13255 1194 aa12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 ANO10Q9NW15 660 aa12.84□□□□□ -0.35
PTCHD1-201ENST00000379361 ERCC6LQ2NKX8 1250 aa12.83□□□□□ -0.35
PTCHD1-201ENST00000379361 RTEL1-TNFRSF6BF6WH68 1400 aa12.83□□□□□ -0.35
PTCHD1-201ENST00000379361 HSF2BPO75031 334 aa12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 KIAA0753Q2KHM9 967 aa12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 TBC1D31Q96DN5 1066 aa12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 GSDMDP57764 484 aa12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 PLEKHH2Q8IVE3 1493 aa12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 DNA2P51530 1060 aa12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 SATB1Q01826 763 aa12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 GABPB2Q8TAK5 448 aaPredicted RBP12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 CCDC110Q8TBZ0 833 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms