RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 SYT17Q9BSW7 474 aa15.33■□□□□ 0.04
PCNA-201ENST00000379143 COL24A1Q17RW2 1714 aa15.33■□□□□ 0.04
PCNA-201ENST00000379143 CT47B1P0C2W7 299 aaPredicted RBP15.32■□□□□ 0.04
PCNA-201ENST00000379143 USPL1Q5W0Q7 1092 aa15.32■□□□□ 0.04
PCNA-201ENST00000379143 KIF6Q6ZMV9 814 aa15.32■□□□□ 0.04
PCNA-201ENST00000379143 ZNF428Q96B54 188 aa15.32■□□□□ 0.04
PCNA-201ENST00000379143 SGIP1Q9BQI5 828 aa15.32■□□□□ 0.04
PCNA-201ENST00000379143 FHDC1Q9C0D6 1143 aaPredicted RBP15.32■□□□□ 0.04
PCNA-201ENST00000379143 TBC1D2BQ9UPU7 963 aa15.32■□□□□ 0.04
PCNA-201ENST00000379143 ZNF652Q9Y2D9 606 aa15.32■□□□□ 0.04
PCNA-201ENST00000379143 SCN7AQ01118 1682 aa15.32■□□□□ 0.04
PCNA-201ENST00000379143 GOLGB1Q14789 3259 aaKnown RBP15.31■□□□□ 0.04
PCNA-201ENST00000379143 BCORQ6W2J9 1755 aa15.31■□□□□ 0.04
PCNA-201ENST00000379143 POLD1P28340 1107 aa15.31■□□□□ 0.04
PCNA-201ENST00000379143 CLEC4GQ6UXB4 293 aa15.31■□□□□ 0.04
PCNA-201ENST00000379143 LRP10Q7Z4F1 713 aa15.31■□□□□ 0.04
PCNA-201ENST00000379143 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
PCNA-201ENST00000379143 ERVV-1B6SEH8 477 aa15.3■□□□□ 0.04
PCNA-201ENST00000379143 CAMTA2O94983 1202 aa15.3■□□□□ 0.04
PCNA-201ENST00000379143 PROSER3Q2NL68 480 aa15.3■□□□□ 0.04
PCNA-201ENST00000379143 MAP3K15Q6ZN16 1313 aa15.3■□□□□ 0.04
PCNA-201ENST00000379143 ANXA1P04083 346 aa15.29■□□□□ 0.04
PCNA-201ENST00000379143 MSL1Q68DK7 614 aa15.29■□□□□ 0.04
PCNA-201ENST00000379143 COPS6Q7L5N1 327 aa15.29■□□□□ 0.04
PCNA-201ENST00000379143 CACNA1FO60840 1977 aa15.29■□□□□ 0.04
PCNA-201ENST00000379143 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
PCNA-201ENST00000379143 FKBP8Q14318 412 aa15.28■□□□□ 0.04
PCNA-201ENST00000379143 XAGE3Q8WTP9 111 aa15.28■□□□□ 0.04
PCNA-201ENST00000379143 DDX58O95786 925 aaKnown RBP15.27■□□□□ 0.04
PCNA-201ENST00000379143 C1QTNF8P60827 252 aa15.27■□□□□ 0.04
PCNA-201ENST00000379143 AIMP1Q12904 312 aaKnown RBP15.27■□□□□ 0.04
PCNA-201ENST00000379143 TTLL7Q6ZT98 887 aa15.27■□□□□ 0.04
PCNA-201ENST00000379143 BCL2L12Q9HB09 334 aa15.27■□□□□ 0.04
PCNA-201ENST00000379143 MMP10P09238 476 aa15.26■□□□□ 0.03
PCNA-201ENST00000379143 TM4SF1P30408 202 aa15.26■□□□□ 0.03
PCNA-201ENST00000379143 GIGYF2Q6Y7W6 1299 aaKnown RBP15.26■□□□□ 0.03
PCNA-201ENST00000379143 ANKRD13DQ6ZTN6 518 aa15.26■□□□□ 0.03
PCNA-201ENST00000379143 PLBD2Q8NHP8 589 aa15.26■□□□□ 0.03
PCNA-201ENST00000379143 ZBTB3Q9H5J0 574 aa15.26■□□□□ 0.03
PCNA-201ENST00000379143 CEP350Q5VT06 3117 aa15.26■□□□□ 0.03
PCNA-201ENST00000379143 TCERG1O14776 1098 aaKnown RBP15.25■□□□□ 0.03
PCNA-201ENST00000379143 ALDH1L2Q3SY69 923 aa15.25■□□□□ 0.03
PCNA-201ENST00000379143 HSP90AB3PQ58FF7 597 aa15.25■□□□□ 0.03
PCNA-201ENST00000379143 PHAXQ9H814 394 aaKnown RBP15.25■□□□□ 0.03
PCNA-201ENST00000379143 PARP3Q9Y6F1 533 aa15.25■□□□□ 0.03
PCNA-201ENST00000379143 NFIXQ14938 502 aa15.24■□□□□ 0.03
PCNA-201ENST00000379143 TBC1D9BQ66K14 1250 aa15.24■□□□□ 0.03
PCNA-201ENST00000379143 SETDB2Q96T68 719 aa15.24■□□□□ 0.03
PCNA-201ENST00000379143 NUP98P52948 1817 aa15.24■□□□□ 0.03
PCNA-201ENST00000379143 CARMIL3Q8ND23 1372 aa15.24■□□□□ 0.03
PCNA-201ENST00000379143 ATP10DQ9P241 1426 aa15.24■□□□□ 0.03
PCNA-201ENST00000379143 FLIIQ13045 1269 aa15.23■□□□□ 0.03
PCNA-201ENST00000379143 HLFQ16534 295 aa15.23■□□□□ 0.03
PCNA-201ENST00000379143 RIC3Q7Z5B4 369 aa15.23■□□□□ 0.03
PCNA-201ENST00000379143 YTHDC1Q96MU7 727 aaKnown RBP15.23■□□□□ 0.03
PCNA-201ENST00000379143 POLRMTO00411 1230 aaKnown RBP15.22■□□□□ 0.03
PCNA-201ENST00000379143 BICDL1Q6ZP65 573 aa15.22■□□□□ 0.03
PCNA-201ENST00000379143 NIP7Q9Y221 180 aaKnown RBP eCLIP15.22■□□□□ 0.03
PCNA-201ENST00000379143 DDR1Q08345 913 aa15.21■□□□□ 0.03
PCNA-201ENST00000379143 FKBP5Q13451 457 aaPredicted RBP15.21■□□□□ 0.03
PCNA-201ENST00000379143 PARP10Q53GL7 1025 aa15.21■□□□□ 0.03
PCNA-201ENST00000379143 ANKRD36CQ5JPF3 1778 aa15.21■□□□□ 0.03
PCNA-201ENST00000379143 KSR2Q6VAB6 950 aa15.21■□□□□ 0.03
PCNA-201ENST00000379143 SSH1Q8WYL5 1049 aa15.21■□□□□ 0.03
PCNA-201ENST00000379143 SMC4Q9NTJ3 1288 aa15.21■□□□□ 0.03
PCNA-201ENST00000379143 ARFGEF2Q9Y6D5 1785 aa15.21■□□□□ 0.03
PCNA-201ENST00000379143 SERPINB2P05120 415 aa15.2■□□□□ 0.02
PCNA-201ENST00000379143 TCIRG1Q13488 830 aa15.2■□□□□ 0.02
PCNA-201ENST00000379143 G2E3Q7L622 706 aa15.2■□□□□ 0.02
PCNA-201ENST00000379143 ZNF34Q8IZ26 560 aa15.2■□□□□ 0.02
PCNA-201ENST00000379143 MRPL50Q8N5N7 158 aaKnown RBP15.2■□□□□ 0.02
PCNA-201ENST00000379143 NRXN2Q9P2S2 1712 aa15.2■□□□□ 0.02
PCNA-201ENST00000379143 PTPRCP08575 1304 aa15.19■□□□□ 0.02
PCNA-201ENST00000379143 PI4KAP2A4QPH2 592 aa15.19■□□□□ 0.02
PCNA-201ENST00000379143 NPHP1O15259 732 aa15.19■□□□□ 0.02
PCNA-201ENST00000379143 RARSP54136 660 aaKnown RBP15.19■□□□□ 0.02
PCNA-201ENST00000379143 BRPF1P55201 1214 aaPredicted RBP15.19■□□□□ 0.02
PCNA-201ENST00000379143 NEXNQ0ZGT2 675 aa15.19■□□□□ 0.02
PCNA-201ENST00000379143 TPTE2Q6XPS3 522 aa15.19■□□□□ 0.02
PCNA-201ENST00000379143 PPP1R42Q7Z4L9 355 aa15.19■□□□□ 0.02
PCNA-201ENST00000379143 PI4KAP1Q8N8J0 262 aa15.19■□□□□ 0.02
PCNA-201ENST00000379143 NYXQ9GZU5 481 aa15.19■□□□□ 0.02
PCNA-201ENST00000379143 IBTKQ9P2D0 1353 aaPredicted RBP15.19■□□□□ 0.02
PCNA-201ENST00000379143 NBPF5PQ86XG9 351 aaPredicted RBP15.18■□□□□ 0.02
PCNA-201ENST00000379143 METTL22Q9BUU2 404 aaPredicted RBP15.18■□□□□ 0.02
PCNA-201ENST00000379143 MAP3K2Q9Y2U5 619 aa15.18■□□□□ 0.02
PCNA-201ENST00000379143 CD2APQ9Y5K6 639 aa15.18■□□□□ 0.02
PCNA-201ENST00000379143 AFDNP55196 1824 aaKnown RBP15.18■□□□□ 0.02
PCNA-201ENST00000379143 ADCY9O60503 1353 aa15.18■□□□□ 0.02
PCNA-201ENST00000379143 RNF123Q5XPI4 1314 aa15.18■□□□□ 0.02
PCNA-201ENST00000379143 KIF16BQ96L93 1317 aa15.18■□□□□ 0.02
PCNA-201ENST00000379143 GPTP24298 496 aa15.17■□□□□ 0.02
PCNA-201ENST00000379143 TRIM28Q13263 835 aaKnown RBP15.17■□□□□ 0.02
PCNA-201ENST00000379143 IFFO2Q5TF58 517 aa15.17■□□□□ 0.02
PCNA-201ENST00000379143 CNBD1Q8NA66 436 aa15.17■□□□□ 0.02
PCNA-201ENST00000379143 BCL2L13Q9BXK5 485 aa15.17■□□□□ 0.02
PCNA-201ENST00000379143 C10orf71Q711Q0 1435 aa15.17■□□□□ 0.02
PCNA-201ENST00000379143 UBN2Q6ZU65 1347 aa15.17■□□□□ 0.02
PCNA-201ENST00000379143 KIF13BQ9NQT8 1826 aa15.17■□□□□ 0.02
PCNA-201ENST00000379143 GTF2E1P29083 439 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms