RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 CFAP45Q9UL16 551 aa15.57■□□□□ 0.08
NPHP4-203ENST00000378169 NEO1Q92859 1461 aa15.56■□□□□ 0.08
NPHP4-203ENST00000378169 NBPF6Q5VWK0 638 aa15.56■□□□□ 0.08
NPHP4-203ENST00000378169 RAB11FIP4Q86YS3 637 aa15.56■□□□□ 0.08
NPHP4-203ENST00000378169 CCDC47Q96A33 483 aaKnown RBP15.56■□□□□ 0.08
NPHP4-203ENST00000378169 NBPF4Q96M43 638 aa15.56■□□□□ 0.08
NPHP4-203ENST00000378169 LRRC2Q9BYS8 371 aa15.56■□□□□ 0.08
NPHP4-203ENST00000378169 ANO8Q9HCE9 1232 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-203ENST00000378169 METP08581 1390 aa15.56■□□□□ 0.08
NPHP4-203ENST00000378169 SLC3A2P08195 630 aaKnown RBP15.56■□□□□ 0.08
NPHP4-203ENST00000378169 TRPM2O94759 1503 aa15.56■□□□□ 0.08
NPHP4-203ENST00000378169 ANKRD18BA2A2Z9 1011 aa15.56■□□□□ 0.08
NPHP4-203ENST00000378169 ALDH1L1O75891 902 aa15.56■□□□□ 0.08
NPHP4-203ENST00000378169 SH2B1Q9NRF2 756 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-203ENST00000378169 JMYQ8N9B5 988 aa15.55■□□□□ 0.08
NPHP4-203ENST00000378169 PLEKHG3A1L390 1219 aa15.55■□□□□ 0.08
NPHP4-203ENST00000378169 RNMTO43148 476 aaKnown RBP15.55■□□□□ 0.08
NPHP4-203ENST00000378169 NAPBQ9H115 298 aa15.55■□□□□ 0.08
NPHP4-203ENST00000378169 RBM27Q9P2N5 1060 aaKnown RBP15.55■□□□□ 0.08
NPHP4-203ENST00000378169 IPO7O95373 1038 aaKnown RBP15.54■□□□□ 0.08
NPHP4-203ENST00000378169 SBNO1A3KN83 1393 aa15.54■□□□□ 0.08
NPHP4-203ENST00000378169 TPM2P07951 284 aa15.54■□□□□ 0.08
NPHP4-203ENST00000378169 GJB2P29033 226 aa15.54■□□□□ 0.08
NPHP4-203ENST00000378169 BRPF1P55201 1214 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-203ENST00000378169 ACSBG1Q96GR2 724 aa15.54■□□□□ 0.08
NPHP4-203ENST00000378169 STX6O43752 255 aa15.54■□□□□ 0.08
NPHP4-203ENST00000378169 SOS1Q07889 1333 aaPredicted RBP15.53■□□□□ 0.08
NPHP4-203ENST00000378169 ZNF213O14771 459 aa15.53■□□□□ 0.08
NPHP4-203ENST00000378169 HSP90AB3PQ58FF7 597 aa15.53■□□□□ 0.08
NPHP4-203ENST00000378169 PNMA6EA0A0J9YXQ4 647 aa15.53■□□□□ 0.08
NPHP4-203ENST00000378169 NCBP3Q53F19 620 aaKnown RBP15.53■□□□□ 0.08
NPHP4-203ENST00000378169 FILIP1Q7Z7B0 1213 aa15.53■□□□□ 0.08
NPHP4-203ENST00000378169 ZGPATQ8N5A5 531 aaKnown RBP15.53■□□□□ 0.08
NPHP4-203ENST00000378169 KLHDC4Q8TBB5 520 aa15.53■□□□□ 0.08
NPHP4-203ENST00000378169 RBM8AQ9Y5S9 174 aaKnown RBP15.53■□□□□ 0.08
NPHP4-203ENST00000378169 NOC3LQ8WTT2 800 aaKnown RBP15.53■□□□□ 0.08
NPHP4-203ENST00000378169 ZNF652Q9Y2D9 606 aa15.53■□□□□ 0.08
NPHP4-203ENST00000378169 NBPF7P0C2Y1 421 aaPredicted RBP15.52■□□□□ 0.08
NPHP4-203ENST00000378169 CKAP2LQ8IYA6 745 aa15.52■□□□□ 0.08
NPHP4-203ENST00000378169 BRF1Q92994 677 aa15.52■□□□□ 0.08
NPHP4-203ENST00000378169 USP19O94966 1318 aa15.52■□□□□ 0.07
NPHP4-203ENST00000378169 MAP3K12Q12852 859 aa15.52■□□□□ 0.07
NPHP4-203ENST00000378169 MAP3K11Q16584 847 aa15.52■□□□□ 0.07
NPHP4-203ENST00000378169 IQSEC3Q9UPP2 1182 aaPredicted RBP15.52■□□□□ 0.07
NPHP4-203ENST00000378169 ZNF521Q96K83 1311 aa15.52■□□□□ 0.07
NPHP4-203ENST00000378169 NEK1Q96PY6 1258 aa15.51■□□□□ 0.07
NPHP4-203ENST00000378169 CDC42BPAQ5VT25 1732 aa15.51■□□□□ 0.07
NPHP4-203ENST00000378169 ZPR1O75312 459 aa15.51■□□□□ 0.07
NPHP4-203ENST00000378169 CDKL5O76039 1030 aa15.51■□□□□ 0.07
NPHP4-203ENST00000378169 PLEKHF1Q96S99 279 aa15.51■□□□□ 0.07
NPHP4-203ENST00000378169 DDX21Q9NR30 783 aaKnown RBP eCLIP15.51■□□□□ 0.07
NPHP4-203ENST00000378169 CTDP1Q9Y5B0 961 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-203ENST00000378169 INSRP06213 1382 aa15.51■□□□□ 0.07
NPHP4-203ENST00000378169 ZNF790Q6PG37 636 aa15.51■□□□□ 0.07
NPHP4-203ENST00000378169 TEX13AQ9BXU3 409 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-203ENST00000378169 TTLL5Q6EMB2 1281 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 TRMT2AQ8IZ69 625 aaKnown RBP15.5■□□□□ 0.07
NPHP4-203ENST00000378169 C8orf76Q96K31 380 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 SCAND2PQ9GZW5 306 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-203ENST00000378169 BICC1Q9H694 974 aaKnown RBP15.5■□□□□ 0.07
NPHP4-203ENST00000378169 CHD1O14646 1710 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 PREX2Q70Z35 1606 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 PRDM15P57071 1507 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-203ENST00000378169 CHMLP26374 656 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 CAVIN4Q5BKX8 364 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 CCDC144CPQ8IYA2 1237 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 GOLGA8BA8MQT2 603 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 DTNBO60941 627 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 SERPINC1P01008 464 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 CPA1P15085 419 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 IL17REQ8NFR9 667 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 DCAF5Q96JK2 942 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 TCEAL9Q9UHQ7 104 aa15.5■□□□□ 0.07
NPHP4-203ENST00000378169 KCNQ3O43525 872 aa15.49■□□□□ 0.07
NPHP4-203ENST00000378169 IL2RBP14784 551 aa15.49■□□□□ 0.07
NPHP4-203ENST00000378169 SNX21Q969T3 373 aa15.49■□□□□ 0.07
NPHP4-203ENST00000378169 USP26Q9BXU7 913 aa15.49■□□□□ 0.07
NPHP4-203ENST00000378169 SLC5A1P13866 664 aa15.49■□□□□ 0.07
NPHP4-203ENST00000378169 PPP1R1BQ9UD71 204 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-203ENST00000378169 RANBP6O60518 1105 aaKnown RBP15.48■□□□□ 0.07
NPHP4-203ENST00000378169 USP25Q9UHP3 1055 aa15.48■□□□□ 0.07
NPHP4-203ENST00000378169 NMIQ13287 307 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-203ENST00000378169 MICU3Q86XE3 530 aa15.48■□□□□ 0.07
NPHP4-203ENST00000378169 HMGB1P09429 215 aaKnown RBP15.48■□□□□ 0.07
NPHP4-203ENST00000378169 PANK2Q9BZ23 570 aa15.48■□□□□ 0.07
NPHP4-203ENST00000378169 KLHL40Q2TBA0 621 aa15.48■□□□□ 0.07
NPHP4-203ENST00000378169 HELBQ8NG08 1087 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-203ENST00000378169 ANKIB1Q9P2G1 1089 aa15.48■□□□□ 0.07
NPHP4-203ENST00000378169 IFIT3O14879 490 aaKnown RBP15.47■□□□□ 0.07
NPHP4-203ENST00000378169 MLH3Q9UHC1 1453 aa15.47■□□□□ 0.07
NPHP4-203ENST00000378169 BCORL1Q5H9F3 1711 aa15.47■□□□□ 0.07
NPHP4-203ENST00000378169 RBM5P52756 815 aaKnown RBP eCLIP15.47■□□□□ 0.07
NPHP4-203ENST00000378169 CCDC183Q5T5S1 534 aa15.47■□□□□ 0.07
NPHP4-203ENST00000378169 CEP57L1Q8IYX8 460 aa15.47■□□□□ 0.07
NPHP4-203ENST00000378169 USP16Q9Y5T5 823 aa15.47■□□□□ 0.07
NPHP4-203ENST00000378169 KDM5DQ9BY66 1539 aa15.47■□□□□ 0.07
NPHP4-203ENST00000378169 TXLNAP40222 546 aa15.47■□□□□ 0.07
NPHP4-203ENST00000378169 RBM10P98175 930 aaKnown RBP15.47■□□□□ 0.07
NPHP4-203ENST00000378169 ATP2B3Q16720 1220 aa15.47■□□□□ 0.07
NPHP4-203ENST00000378169 POLR3DP05423 398 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms