RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ARHGEF11O15085 1522 aa13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 CCT2P78371 535 aaKnown RBP13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 SPA17Q15506 151 aa13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 C8orf76Q96K31 380 aa13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 TBC1D32Q96NH3 1257 aa13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 KIF4BQ2VIQ3 1234 aa13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 METTL24Q5JXM2 366 aa13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 ANKRD18AQ8IVF6 992 aa13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 GBP2P32456 591 aaPredicted RBP13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 TSHZ3Q63HK5 1081 aa13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 ZNF830Q96NB3 372 aaPredicted RBP13.89□□□□□ -0.19
PCDHA9-201ENST00000378122 RPGRIP1LQ68CZ1 1315 aa13.88□□□□□ -0.19
PCDHA9-201ENST00000378122 CABLES1Q8TDN4 633 aa13.88□□□□□ -0.19
PCDHA9-201ENST00000378122 NUDT16Q96DE0 195 aaKnown RBP13.88□□□□□ -0.19
PCDHA9-201ENST00000378122 TRMT112Q9UI30 125 aaKnown RBP13.88□□□□□ -0.19
PCDHA9-201ENST00000378122 MCM5P33992 734 aa13.88□□□□□ -0.19
PCDHA9-201ENST00000378122 MAP9Q49MG5 647 aa13.88□□□□□ -0.19
PCDHA9-201ENST00000378122 CEP135Q66GS9 1140 aa13.88□□□□□ -0.19
PCDHA9-201ENST00000378122 CSPG5O95196 566 aa13.88□□□□□ -0.19
PCDHA9-201ENST00000378122 PRKG1Q13976 671 aa13.88□□□□□ -0.19
PCDHA9-201ENST00000378122 BMP2KQ9NSY1 1161 aaPredicted RBP13.88□□□□□ -0.19
PCDHA9-201ENST00000378122 ATP6V1AP38606 617 aa13.88□□□□□ -0.19
PCDHA9-201ENST00000378122 FSIP1Q8NA03 581 aa13.88□□□□□ -0.19
PCDHA9-201ENST00000378122 GPATCH11Q8N954 259 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 JDP2Q8WYK2 163 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 ZFP91Q96JP5 570 aaPredicted RBP13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 NUP88Q99567 741 aaPredicted RBP13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 TFIP11Q9UBB9 837 aaKnown RBP13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 ABCC11Q96J66 1382 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 CD109Q6YHK3 1445 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 BIN1O00499 593 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 MYCP01106 439 aaPredicted RBP13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 ATXN8OSP0DMR3 200 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 KIF14Q15058 1648 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 STX6O43752 255 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 STX1AQ16623 288 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 CCDC178Q5BJE1 867 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 ISM2Q6H9L7 571 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 DNA2P51530 1060 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 NBPF6Q5VWK0 638 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 NBPF5PQ86XG9 351 aaPredicted RBP13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 NBPF4Q96M43 638 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 DISP3Q9P2K9 1392 aa13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 RNF187Q5TA31 235 aaPredicted RBP13.87□□□□□ -0.19
PCDHA9-201ENST00000378122 IFIT1P09914 478 aaKnown RBP13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 CCDC113Q9H0I3 377 aa13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 CTAGE5O15320 804 aa13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 TTC22Q5TAA0 569 aa13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 DDX46Q7L014 1031 aaKnown RBP13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 TICAM2Q86XR7 235 aa13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 INCENPQ9NQS7 918 aa13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 BCCIPQ9P287 314 aaKnown RBP eCLIP13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 MAP3K1Q13233 1512 aa13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 MINDY4BA8MYZ0 360 aa13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 CNNM3Q8NE01 707 aa13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 GOPCQ9HD26 462 aa13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 MCM3P25205 808 aa13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 MAP2K1Q02750 393 aaPredicted RBP13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 CCDC82Q8N4S0 544 aa13.86□□□□□ -0.19
PCDHA9-201ENST00000378122 SSRP1Q08945 709 aaKnown RBP13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 SNW1Q13573 536 aaKnown RBP13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 LRSAM1Q6UWE0 723 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 ABCC5O15440 1437 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 APBA3O96018 575 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 TAF7Q15545 349 aaPredicted RBP13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 NME9Q86XW9 330 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 UBA5Q9GZZ9 404 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 PHF8Q9UPP1 1060 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 RIMBP2O15034 1052 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 FKBP15Q5T1M5 1219 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 DDX19AQ9NUU7 478 aaKnown RBP13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 UVSSAQ2YD98 709 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 PPP4R3AQ6IN85 833 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 PRIMPOLQ96LW4 560 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 PANK2Q9BZ23 570 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 EMILIN1Q9Y6C2 1016 aa13.85□□□□□ -0.19
PCDHA9-201ENST00000378122 NEMFO60524 1076 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 XRCC6P12956 609 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 CLCN1P35523 988 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 KLHL40Q2TBA0 621 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 GIMAP6Q6P9H5 292 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 GOLGA8BA8MQT2 603 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 KCNH5Q8NCM2 988 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 AKAP2Q9Y2D5 859 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 DYDC1Q8WWB3 177 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 PPFIA3O75145 1194 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 HMGB1P09429 215 aaKnown RBP13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 LMAN1P49257 510 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 CADPS2Q86UW7 1296 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 TSG101Q99816 390 aa13.84□□□□□ -0.19
PCDHA9-201ENST00000378122 BMP2KLQ5H9B9 411 aa13.83□□□□□ -0.19
PCDHA9-201ENST00000378122 GSDMDP57764 484 aa13.83□□□□□ -0.2
PCDHA9-201ENST00000378122 DDB1Q16531 1140 aa13.83□□□□□ -0.2
PCDHA9-201ENST00000378122 CACNA2D4Q7Z3S7 1137 aa13.83□□□□□ -0.2
PCDHA9-201ENST00000378122 SLC12A7Q9Y666 1083 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms