RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 REC8O95072 547 aa9.83□□□□□ -0.84
CKAP2-203ENST00000378037 PTMAP06454 111 aaKnown RBP9.83□□□□□ -0.84
CKAP2-203ENST00000378037 NUCB1Q02818 461 aa9.83□□□□□ -0.84
CKAP2-203ENST00000378037 PTPRUQ92729 1446 aa9.83□□□□□ -0.84
CKAP2-203ENST00000378037 CHGBP05060 677 aa9.83□□□□□ -0.84
CKAP2-203ENST00000378037 UNC5CLQ8IV45 518 aa9.83□□□□□ -0.84
CKAP2-203ENST00000378037 TRMT112Q9UI30 125 aaKnown RBP9.83□□□□□ -0.84
CKAP2-203ENST00000378037 MAP3K5Q99683 1374 aa9.83□□□□□ -0.84
CKAP2-203ENST00000378037 GOLGA6L4A6NEF3 574 aa9.83□□□□□ -0.84
CKAP2-203ENST00000378037 HCLS1P14317 486 aaPredicted RBP9.83□□□□□ -0.84
CKAP2-203ENST00000378037 AKAP4Q5JQC9 854 aa9.83□□□□□ -0.84
CKAP2-203ENST00000378037 FMNL2Q96PY5 1086 aa9.83□□□□□ -0.84
CKAP2-203ENST00000378037 FIBPO43427 364 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 CCDC57Q2TAC2 916 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 PLEKHM2Q8IWE5 1019 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 RPAP2Q8IXW5 612 aaPredicted RBP9.82□□□□□ -0.84
CKAP2-203ENST00000378037 RHPN1Q8TCX5 695 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 TRIM44Q96DX7 344 aaPredicted RBP9.82□□□□□ -0.84
CKAP2-203ENST00000378037 SIRT1Q96EB6 747 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 FAM135BQ49AJ0 1406 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 SBNO1A3KN83 1393 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 NINLQ9Y2I6 1382 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 GOLIM4O00461 696 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 PRPF40AO75400 957 aaKnown RBP9.82□□□□□ -0.84
CKAP2-203ENST00000378037 SSFA2P28290 1259 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 GUCY1B3Q02153 619 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 AMOTQ4VCS5 1084 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 PDE1AP54750 535 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 EIF4A1P60842 406 aaKnown RBP9.82□□□□□ -0.84
CKAP2-203ENST00000378037 KIF6Q6ZMV9 814 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 CCDC129Q6ZRS4 1044 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 ARHGEF25Q86VW2 580 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 ZGPATQ8N5A5 531 aaKnown RBP9.82□□□□□ -0.84
CKAP2-203ENST00000378037 USP44Q9H0E7 712 aa9.82□□□□□ -0.84
CKAP2-203ENST00000378037 NPC1L1Q9UHC9 1359 aa9.81□□□□□ -0.84
CKAP2-203ENST00000378037 GSE1Q14687 1217 aa9.81□□□□□ -0.84
CKAP2-203ENST00000378037 JAKMIP1Q96N16 626 aaKnown RBP9.81□□□□□ -0.84
CKAP2-203ENST00000378037 ANKRD26Q9UPS8 1709 aa9.81□□□□□ -0.84
CKAP2-203ENST00000378037 CD2BP2O95400 341 aaKnown RBP9.81□□□□□ -0.84
CKAP2-203ENST00000378037 CT47B1P0C2W7 299 aaPredicted RBP9.81□□□□□ -0.84
CKAP2-203ENST00000378037 CHAF1AQ13111 956 aaPredicted RBP9.81□□□□□ -0.84
CKAP2-203ENST00000378037 ANKRD44Q8N8A2 993 aa9.81□□□□□ -0.84
CKAP2-203ENST00000378037 NECAB1Q8N987 351 aa9.81□□□□□ -0.84
CKAP2-203ENST00000378037 GSPT1P15170 499 aaKnown RBP9.81□□□□□ -0.84
CKAP2-203ENST00000378037 BRINP3Q76B58 766 aa9.81□□□□□ -0.84
CKAP2-203ENST00000378037 NWD2Q9ULI1 1742 aa9.8□□□□□ -0.84
CKAP2-203ENST00000378037 ERC2O15083 957 aa9.8□□□□□ -0.84
CKAP2-203ENST00000378037 IL2RBP14784 551 aa9.8□□□□□ -0.84
CKAP2-203ENST00000378037 CASTP20810 708 aaKnown RBP9.8□□□□□ -0.84
CKAP2-203ENST00000378037 CAVIN1Q6NZI2 390 aaKnown RBP9.8□□□□□ -0.84
CKAP2-203ENST00000378037 CCDC144CPQ8IYA2 1237 aa9.8□□□□□ -0.84
CKAP2-203ENST00000378037 SUCLG2Q96I99 432 aa9.8□□□□□ -0.84
CKAP2-203ENST00000378037 SOS1Q07889 1333 aaPredicted RBP9.8□□□□□ -0.84
CKAP2-203ENST00000378037 CYP27B1O15528 508 aa9.8□□□□□ -0.84
CKAP2-203ENST00000378037 SNRPA1P09661 255 aaKnown RBP9.8□□□□□ -0.84
CKAP2-203ENST00000378037 CNTROBQ8N137 903 aa9.8□□□□□ -0.84
CKAP2-203ENST00000378037 GRM8O00222 908 aa9.8□□□□□ -0.84
CKAP2-203ENST00000378037 ATP6V1AP38606 617 aa9.8□□□□□ -0.84
CKAP2-203ENST00000378037 GNL2Q13823 731 aaKnown RBP9.8□□□□□ -0.84
CKAP2-203ENST00000378037 CREBRFQ8IUR6 639 aa9.8□□□□□ -0.84
CKAP2-203ENST00000378037 SMC5Q8IY18 1101 aa9.8□□□□□ -0.84
CKAP2-203ENST00000378037 MON2Q7Z3U7 1717 aa9.79□□□□□ -0.84
CKAP2-203ENST00000378037 METTL24Q5JXM2 366 aa9.79□□□□□ -0.84
CKAP2-203ENST00000378037 TLR7Q9NYK1 1049 aaKnown RBP9.79□□□□□ -0.84
CKAP2-203ENST00000378037 GIGYF1O75420 1035 aaPredicted RBP9.79□□□□□ -0.84
CKAP2-203ENST00000378037 TTC22Q5TAA0 569 aa9.79□□□□□ -0.84
CKAP2-203ENST00000378037 CCDC83Q8IWF9 413 aa9.79□□□□□ -0.84
CKAP2-203ENST00000378037 TBC1D32Q96NH3 1257 aa9.79□□□□□ -0.84
CKAP2-203ENST00000378037 GBP4Q96PP9 640 aa9.79□□□□□ -0.84
CKAP2-203ENST00000378037 PLCH1Q4KWH8 1693 aa9.79□□□□□ -0.84
CKAP2-203ENST00000378037 IL16Q14005 1332 aa9.79□□□□□ -0.84
CKAP2-203ENST00000378037 ZKSCAN1P17029 563 aaPredicted RBP9.78□□□□□ -0.84
CKAP2-203ENST00000378037 DDB1Q16531 1140 aa9.78□□□□□ -0.84
CKAP2-203ENST00000378037 MPHOSPH8Q99549 860 aa9.78□□□□□ -0.84
CKAP2-203ENST00000378037 QRICH2Q9H0J4 1663 aa9.78□□□□□ -0.84
CKAP2-203ENST00000378037 TAF5LO75529 589 aa9.78□□□□□ -0.84
CKAP2-203ENST00000378037 HDAC1Q13547 482 aaPredicted RBP9.78□□□□□ -0.84
CKAP2-203ENST00000378037 KIF1BPQ96EK5 621 aa9.78□□□□□ -0.84
CKAP2-203ENST00000378037 CHMP5Q9NZZ3 219 aa9.78□□□□□ -0.84
CKAP2-203ENST00000378037 CCT2P78371 535 aaKnown RBP9.78□□□□□ -0.84
CKAP2-203ENST00000378037 TFCP2Q12800 502 aa9.78□□□□□ -0.84
CKAP2-203ENST00000378037 PKP1Q13835 747 aa9.78□□□□□ -0.84
CKAP2-203ENST00000378037 LDHAL6AQ6ZMR3 332 aa9.78□□□□□ -0.84
CKAP2-203ENST00000378037 FAM227BQ96M60 508 aa9.78□□□□□ -0.84
CKAP2-203ENST00000378037 PUS7Q96PZ0 661 aaKnown RBP9.78□□□□□ -0.84
CKAP2-203ENST00000378037 SEC62Q99442 399 aaKnown RBP9.78□□□□□ -0.84
CKAP2-203ENST00000378037 CEP126Q9P2H0 1117 aa9.78□□□□□ -0.84
CKAP2-203ENST00000378037 ERBB3P21860 1342 aa9.78□□□□□ -0.84
CKAP2-203ENST00000378037 G3V3G9 751 aa9.77□□□□□ -0.84
CKAP2-203ENST00000378037 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.84
CKAP2-203ENST00000378037 KSR2Q6VAB6 950 aa9.77□□□□□ -0.84
CKAP2-203ENST00000378037 DCTPP1Q9H773 170 aa9.77□□□□□ -0.84
CKAP2-203ENST00000378037 TRAK2O60296 914 aa9.77□□□□□ -0.85
CKAP2-203ENST00000378037 PI16Q6UXB8 463 aa9.77□□□□□ -0.85
CKAP2-203ENST00000378037 UBE2Q2Q8WVN8 375 aa9.77□□□□□ -0.85
CKAP2-203ENST00000378037 RGPD3A6NKT7 1758 aaPredicted RBP9.77□□□□□ -0.85
CKAP2-203ENST00000378037 RGPD4Q7Z3J3 1758 aa9.77□□□□□ -0.85
CKAP2-203ENST00000378037 IGSF1Q8N6C5 1336 aa9.77□□□□□ -0.85
CKAP2-203ENST00000378037 TTC39AQ5SRH9 613 aa9.77□□□□□ -0.85
CKAP2-203ENST00000378037 FAM173BQ6P4H8 233 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms