RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 BTBD11A6QL63 1104 aa14.08□□□□□ -0.16
MCF2L-202ENST00000375597 F13A1P00488 732 aa14.08□□□□□ -0.16
MCF2L-202ENST00000375597 NEUROD6Q96NK8 337 aa14.08□□□□□ -0.16
MCF2L-202ENST00000375597 FTOQ9C0B1 505 aaKnown RBP eCLIP14.08□□□□□ -0.16
MCF2L-202ENST00000375597 DACT1Q9NYF0 836 aa14.08□□□□□ -0.16
MCF2L-202ENST00000375597 PIK3R4Q99570 1358 aa14.08□□□□□ -0.16
MCF2L-202ENST00000375597 CCT2P78371 535 aaKnown RBP14.08□□□□□ -0.16
MCF2L-202ENST00000375597 ATP5J2-PTCD1G3V325 749 aa14.07□□□□□ -0.16
MCF2L-202ENST00000375597 JAK2O60674 1132 aa14.07□□□□□ -0.16
MCF2L-202ENST00000375597 PTCD1O75127 700 aaKnown RBP14.07□□□□□ -0.16
MCF2L-202ENST00000375597 PTPN21Q16825 1174 aa14.07□□□□□ -0.16
MCF2L-202ENST00000375597 CCDC186Q7Z3E2 898 aa14.07□□□□□ -0.16
MCF2L-202ENST00000375597 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-202ENST00000375597 ANKRD26Q9UPS8 1709 aa14.07□□□□□ -0.16
MCF2L-202ENST00000375597 MCM2P49736 904 aa14.07□□□□□ -0.16
MCF2L-202ENST00000375597 BRPF1P55201 1214 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-202ENST00000375597 ME3Q16798 604 aa14.07□□□□□ -0.16
MCF2L-202ENST00000375597 HSP90AB3PQ58FF7 597 aa14.07□□□□□ -0.16
MCF2L-202ENST00000375597 DNAAF4Q8WXU2 420 aa14.07□□□□□ -0.16
MCF2L-202ENST00000375597 TNMDQ9H2S6 317 aa14.07□□□□□ -0.16
MCF2L-202ENST00000375597 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-202ENST00000375597 U2AF2P26368 475 aaKnown RBP eCLIP14.06□□□□□ -0.16
MCF2L-202ENST00000375597 ZC3H6P61129 1189 aaKnown RBP14.06□□□□□ -0.16
MCF2L-202ENST00000375597 G3BP1Q13283 466 aaKnown RBP eCLIP14.06□□□□□ -0.16
MCF2L-202ENST00000375597 KIF1BPQ96EK5 621 aa14.06□□□□□ -0.16
MCF2L-202ENST00000375597 RBM8AQ9Y5S9 174 aaKnown RBP14.06□□□□□ -0.16
MCF2L-202ENST00000375597 ESCO1Q5FWF5 840 aa14.06□□□□□ -0.16
MCF2L-202ENST00000375597 RIC3Q7Z5B4 369 aa14.06□□□□□ -0.16
MCF2L-202ENST00000375597 DNAJC25Q9H1X3 360 aa14.06□□□□□ -0.16
MCF2L-202ENST00000375597 ROBO2Q9HCK4 1378 aa14.06□□□□□ -0.16
MCF2L-202ENST00000375597 MED14O60244 1454 aa14.06□□□□□ -0.16
MCF2L-202ENST00000375597 AP5Z1O43299 807 aa14.06□□□□□ -0.16
MCF2L-202ENST00000375597 NMIQ13287 307 aaPredicted RBP14.06□□□□□ -0.16
MCF2L-202ENST00000375597 SEC62Q99442 399 aaKnown RBP14.06□□□□□ -0.16
MCF2L-202ENST00000375597 EDC4Q6P2E9 1401 aaKnown RBP14.06□□□□□ -0.16
MCF2L-202ENST00000375597 DIP2CQ9Y2E4 1556 aa14.06□□□□□ -0.16
MCF2L-202ENST00000375597 SGSM2O43147 1006 aa14.05□□□□□ -0.16
MCF2L-202ENST00000375597 ANO6Q4KMQ2 910 aa14.05□□□□□ -0.16
MCF2L-202ENST00000375597 GORABQ5T7V8 394 aa14.05□□□□□ -0.16
MCF2L-202ENST00000375597 TMX1Q9H3N1 280 aa14.05□□□□□ -0.16
MCF2L-202ENST00000375597 HSP90AA4PQ58FG1 418 aa14.05□□□□□ -0.16
MCF2L-202ENST00000375597 PDLIM2Q96JY6 352 aa14.05□□□□□ -0.16
MCF2L-202ENST00000375597 SPATA32Q96LK8 384 aa14.05□□□□□ -0.16
MCF2L-202ENST00000375597 DDX46Q7L014 1031 aaKnown RBP14.05□□□□□ -0.16
MCF2L-202ENST00000375597 FAM184AQ8NB25 1140 aa14.05□□□□□ -0.16
MCF2L-202ENST00000375597 NUP62CLQ9H1M0 184 aa14.05□□□□□ -0.16
MCF2L-202ENST00000375597 KIF3AQ9Y496 699 aa14.05□□□□□ -0.16
MCF2L-202ENST00000375597 ARHGEF40Q8TER5 1519 aa14.04□□□□□ -0.16
MCF2L-202ENST00000375597 HSPA4P34932 840 aa14.04□□□□□ -0.16
MCF2L-202ENST00000375597 PSME1Q06323 249 aa14.04□□□□□ -0.16
MCF2L-202ENST00000375597 ARID5BQ14865 1188 aa14.04□□□□□ -0.16
MCF2L-202ENST00000375597 LARP1Q6PKG0 1096 aaKnown RBP14.04□□□□□ -0.16
MCF2L-202ENST00000375597 TPCN1Q9ULQ1 816 aa14.04□□□□□ -0.16
MCF2L-202ENST00000375597 MAP2P11137 1827 aaKnown RBP14.04□□□□□ -0.16
MCF2L-202ENST00000375597 BIN1O00499 593 aa14.04□□□□□ -0.16
MCF2L-202ENST00000375597 EID1Q9Y6B2 187 aa14.04□□□□□ -0.16
MCF2L-202ENST00000375597 RIOK3O14730 519 aaKnown RBP14.03□□□□□ -0.16
MCF2L-202ENST00000375597 ZNF500O60304 480 aaPredicted RBP14.03□□□□□ -0.16
MCF2L-202ENST00000375597 UBE2HP62256 183 aa14.03□□□□□ -0.16
MCF2L-202ENST00000375597 TPD52L1Q16890 204 aaPredicted RBP14.03□□□□□ -0.16
MCF2L-202ENST00000375597 BLOC1S2Q6QNY1 142 aa14.03□□□□□ -0.16
MCF2L-202ENST00000375597 TTC6Q86TZ1 520 aa14.03□□□□□ -0.16
MCF2L-202ENST00000375597 CLTCQ00610 1675 aaKnown RBP14.03□□□□□ -0.16
MCF2L-202ENST00000375597 CCDC192P0DO97 292 aa14.03□□□□□ -0.16
MCF2L-202ENST00000375597 CSB-PGBD3P0DP91 1061 aa14.03□□□□□ -0.16
MCF2L-202ENST00000375597 HDGFP51858 240 aaKnown RBP14.03□□□□□ -0.16
MCF2L-202ENST00000375597 ARHGAP31Q2M1Z3 1444 aa14.03□□□□□ -0.16
MCF2L-202ENST00000375597 A0A0D9SFI3 127 aa14.02□□□□□ -0.16
MCF2L-202ENST00000375597 C1orf141Q5JVX7 400 aa14.02□□□□□ -0.16
MCF2L-202ENST00000375597 OTUD7BQ6GQQ9 843 aa14.02□□□□□ -0.16
MCF2L-202ENST00000375597 FAM177A1Q8N128 213 aaPredicted RBP14.02□□□□□ -0.16
MCF2L-202ENST00000375597 GPATCH3Q96I76 525 aa14.02□□□□□ -0.16
MCF2L-202ENST00000375597 RGS12O14924 1447 aa14.02□□□□□ -0.16
MCF2L-202ENST00000375597 KRT85P78386 507 aa14.02□□□□□ -0.17
MCF2L-202ENST00000375597 NBPF6Q5VWK0 638 aa14.02□□□□□ -0.17
MCF2L-202ENST00000375597 NBPF4Q96M43 638 aa14.02□□□□□ -0.17
MCF2L-202ENST00000375597 TRERF1Q96PN7 1200 aa14.02□□□□□ -0.17
MCF2L-202ENST00000375597 NCOA5Q9HCD5 579 aaKnown RBP14.02□□□□□ -0.17
MCF2L-202ENST00000375597 ATP6V1DQ9Y5K8 247 aa14.02□□□□□ -0.17
MCF2L-202ENST00000375597 DIP2BQ9P265 1576 aa14.02□□□□□ -0.17
MCF2L-202ENST00000375597 IBTKQ9P2D0 1353 aaPredicted RBP14.02□□□□□ -0.17
MCF2L-202ENST00000375597 BECN2A8MW95 431 aa14.02□□□□□ -0.17
MCF2L-202ENST00000375597 PI4K2BQ8TCG2 481 aa14.02□□□□□ -0.17
MCF2L-202ENST00000375597 RUFY2Q8WXA3 655 aa14.02□□□□□ -0.17
MCF2L-202ENST00000375597 LSG1Q9H089 658 aaKnown RBP14.02□□□□□ -0.17
MCF2L-202ENST00000375597 RAD50Q92878 1312 aa14.01□□□□□ -0.17
MCF2L-202ENST00000375597 HOXC9P31274 260 aa14.01□□□□□ -0.17
MCF2L-202ENST00000375597 CUL4AQ13619 759 aa14.01□□□□□ -0.17
MCF2L-202ENST00000375597 MAP3K11Q16584 847 aa14.01□□□□□ -0.17
MCF2L-202ENST00000375597 PDCL2Q8N4E4 241 aa14.01□□□□□ -0.17
MCF2L-202ENST00000375597 CHMP4CQ96CF2 233 aa14.01□□□□□ -0.17
MCF2L-202ENST00000375597 SNRKQ9NRH2 765 aa14.01□□□□□ -0.17
MCF2L-202ENST00000375597 MTMR6Q9Y217 621 aa14.01□□□□□ -0.17
MCF2L-202ENST00000375597 TRHP20396 242 aaPredicted RBP14.01□□□□□ -0.17
MCF2L-202ENST00000375597 HAND2P61296 217 aa14.01□□□□□ -0.17
MCF2L-202ENST00000375597 BCL2L12Q9HB09 334 aa14.01□□□□□ -0.17
MCF2L-202ENST00000375597 ECHDC1Q9NTX5 307 aa14.01□□□□□ -0.17
MCF2L-202ENST00000375597 GLRX3O76003 335 aaKnown RBP14□□□□□ -0.17
MCF2L-202ENST00000375597 CREB3L3Q68CJ9 461 aa14□□□□□ -0.17
MCF2L-202ENST00000375597 ZNF589Q86UQ0 364 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms