RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 KANK3Q6NY19 840 aa10.95□□□□□ -0.66
UBR4-201ENST00000375218 C16orf87Q6PH81 154 aa10.95□□□□□ -0.66
UBR4-201ENST00000375218 SENP7Q9BQF6 1050 aa10.95□□□□□ -0.66
UBR4-201ENST00000375218 ANAPC4Q9UJX5 808 aa10.95□□□□□ -0.66
UBR4-201ENST00000375218 MLLT3P42568 568 aaPredicted RBP10.95□□□□□ -0.66
UBR4-201ENST00000375218 C1QTNF12Q5T7M4 302 aa10.95□□□□□ -0.66
UBR4-201ENST00000375218 NOP9Q86U38 636 aaKnown RBP10.95□□□□□ -0.66
UBR4-201ENST00000375218 ZSCAN30Q86W11 494 aa10.95□□□□□ -0.66
UBR4-201ENST00000375218 SUDS3Q9H7L9 328 aaPredicted RBP10.95□□□□□ -0.66
UBR4-201ENST00000375218 SNRKQ9NRH2 765 aa10.95□□□□□ -0.66
UBR4-201ENST00000375218 IFT57Q9NWB7 429 aa10.95□□□□□ -0.66
UBR4-201ENST00000375218 PRKAG2Q9UGJ0 569 aa10.95□□□□□ -0.66
UBR4-201ENST00000375218 MECOMQ03112 1051 aa10.95□□□□□ -0.66
UBR4-201ENST00000375218 PRC1O43663 620 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 IDI1Q13907 227 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 CFAP53Q96M91 514 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 FAM13BQ9NYF5 915 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 USTQ9Y2C2 406 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 ANKRD26Q9UPS8 1709 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 TBC1D2BQ9UPU7 963 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 TBX22Q9Y458 520 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 AKAP12Q02952 1782 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 CAPN15O75808 1086 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 ABL2P42684 1182 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 KCTD2Q14681 263 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 CHCHD4Q8N4Q1 142 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 PPCSQ9HAB8 311 aa10.94□□□□□ -0.66
UBR4-201ENST00000375218 GEMIN8Q9NWZ8 242 aaKnown RBP10.94□□□□□ -0.66
UBR4-201ENST00000375218 XRN1Q8IZH2 1706 aaKnown RBP10.94□□□□□ -0.66
UBR4-201ENST00000375218 ANP32AP39687 249 aaKnown RBP10.93□□□□□ -0.66
UBR4-201ENST00000375218 RAVER1Q8IY67 606 aaKnown RBP10.93□□□□□ -0.66
UBR4-201ENST00000375218 RPUSD2Q8IZ73 545 aaKnown RBP10.93□□□□□ -0.66
UBR4-201ENST00000375218 ARPC5LQ9BPX5 153 aa10.93□□□□□ -0.66
UBR4-201ENST00000375218 PPFIA3O75145 1194 aa10.93□□□□□ -0.66
UBR4-201ENST00000375218 SLC4A8Q2Y0W8 1093 aa10.93□□□□□ -0.66
UBR4-201ENST00000375218 SUGP1Q8IWZ8 645 aaKnown RBP10.93□□□□□ -0.66
UBR4-201ENST00000375218 PCDH12Q9NPG4 1184 aa10.93□□□□□ -0.66
UBR4-201ENST00000375218 PTPRUQ92729 1446 aa10.93□□□□□ -0.66
UBR4-201ENST00000375218 CCT2P78371 535 aaKnown RBP10.93□□□□□ -0.66
UBR4-201ENST00000375218 DNAJA1P31689 397 aaKnown RBP10.93□□□□□ -0.66
UBR4-201ENST00000375218 TMC2Q8TDI7 906 aa10.93□□□□□ -0.66
UBR4-201ENST00000375218 BSDC1Q9NW68 430 aaPredicted RBP10.93□□□□□ -0.66
UBR4-201ENST00000375218 IP6K2Q9UHH9 426 aa10.93□□□□□ -0.66
UBR4-201ENST00000375218 INTUQ9ULD6 942 aa10.93□□□□□ -0.66
UBR4-201ENST00000375218 SYNPO2Q9UMS6 1093 aa10.93□□□□□ -0.66
UBR4-201ENST00000375218 MKL1Q969V6 931 aa10.92□□□□□ -0.66
UBR4-201ENST00000375218 BORCS6Q96GS4 357 aa10.92□□□□□ -0.66
UBR4-201ENST00000375218 RBM28Q9NW13 759 aaKnown RBP10.92□□□□□ -0.66
UBR4-201ENST00000375218 HMMRO75330 724 aa10.92□□□□□ -0.66
UBR4-201ENST00000375218 ODR4Q5SWX8 454 aa10.92□□□□□ -0.66
UBR4-201ENST00000375218 CFAP70Q5T0N1 1121 aa10.92□□□□□ -0.66
UBR4-201ENST00000375218 CARD14Q9BXL6 1004 aa10.92□□□□□ -0.66
UBR4-201ENST00000375218 SMYD5Q6GMV2 418 aa10.92□□□□□ -0.66
UBR4-201ENST00000375218 VPS37AQ8NEZ2 397 aa10.92□□□□□ -0.66
UBR4-201ENST00000375218 RIMS1Q86UR5 1692 aaKnown RBP10.91□□□□□ -0.66
UBR4-201ENST00000375218 TBC1D12O60347 775 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 DRC7Q8IY82 874 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 STK11IPQ8N1F8 1099 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 MUC3BQ9H195 1237 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 CHMP3Q9Y3E7 222 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 ADAMTS13Q76LX8 1427 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 MON2Q7Z3U7 1717 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 CBFA2T2O43439 604 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 ATICP31939 592 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 NYAP1Q6ZVC0 841 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 CEP63Q96MT8 703 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 SEZ6LQ9BYH1 1024 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 NALCNQ8IZF0 1738 aa10.91□□□□□ -0.66
UBR4-201ENST00000375218 CENPJQ9HC77 1338 aaPredicted RBP10.9□□□□□ -0.66
UBR4-201ENST00000375218 PPP4R4Q6NUP7 873 aa10.9□□□□□ -0.66
UBR4-201ENST00000375218 GJA3Q9Y6H8 435 aa10.9□□□□□ -0.66
UBR4-201ENST00000375218 MICALL1Q8N3F8 863 aa10.9□□□□□ -0.66
UBR4-201ENST00000375218 PLEKHH1Q9ULM0 1364 aa10.9□□□□□ -0.66
UBR4-201ENST00000375218 PPP1R12AO14974 1030 aaPredicted RBP10.9□□□□□ -0.67
UBR4-201ENST00000375218 VDRP11473 427 aa10.9□□□□□ -0.67
UBR4-201ENST00000375218 CCDC94Q9BW85 323 aaPredicted RBP10.9□□□□□ -0.67
UBR4-201ENST00000375218 CHD2O14647 1828 aaKnown RBP10.89□□□□□ -0.67
UBR4-201ENST00000375218 CASQ1P31415 396 aa10.89□□□□□ -0.67
UBR4-201ENST00000375218 CEP89Q96ST8 783 aa10.89□□□□□ -0.67
UBR4-201ENST00000375218 SCINQ9Y6U3 715 aa10.89□□□□□ -0.67
UBR4-201ENST00000375218 ANKRD33BA6NCL7 494 aa10.89□□□□□ -0.67
UBR4-201ENST00000375218 FOSP01100 380 aaPredicted RBP10.89□□□□□ -0.67
UBR4-201ENST00000375218 TGFB3P10600 412 aa10.89□□□□□ -0.67
UBR4-201ENST00000375218 RNF187Q5TA31 235 aaPredicted RBP10.89□□□□□ -0.67
UBR4-201ENST00000375218 PDCL3Q9H2J4 239 aa10.89□□□□□ -0.67
UBR4-201ENST00000375218 SCAF11Q99590 1463 aaKnown RBP10.89□□□□□ -0.67
UBR4-201ENST00000375218 GOLGA6L22H0YM25 854 aa10.89□□□□□ -0.67
UBR4-201ENST00000375218 HDLBPQ00341 1268 aaKnown RBP10.89□□□□□ -0.67
UBR4-201ENST00000375218 C22orf23Q9BZE7 217 aa10.89□□□□□ -0.67
UBR4-201ENST00000375218 BIN2Q9UBW5 565 aaPredicted RBP10.89□□□□□ -0.67
UBR4-201ENST00000375218 PARD3Q8TEW0 1356 aa10.89□□□□□ -0.67
UBR4-201ENST00000375218 DDX56Q9NY93 547 aaKnown RBP10.88□□□□□ -0.67
UBR4-201ENST00000375218 STRCQ7RTU9 1775 aa10.88□□□□□ -0.67
UBR4-201ENST00000375218 ARHGAP23Q9P227 1491 aa10.88□□□□□ -0.67
UBR4-201ENST00000375218 FAM163BP0C2L3 166 aa10.88□□□□□ -0.67
UBR4-201ENST00000375218 PRKRIP1Q9H875 184 aaPredicted RBP10.88□□□□□ -0.67
UBR4-201ENST00000375218 RABL2BQ9UNT1 228 aa10.88□□□□□ -0.67
UBR4-201ENST00000375218 PEAK1Q9H792 1746 aa10.88□□□□□ -0.67
UBR4-201ENST00000375218 DLC1Q96QB1 1528 aa10.88□□□□□ -0.67
UBR4-201ENST00000375218 NUTM2DQ5VT03 806 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms