RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 MRC1P22897 1456 aa18.26■□□□□ 0.51
UBXN11-204ENST00000374217 ZNF790Q6PG37 636 aa18.26■□□□□ 0.51
UBXN11-204ENST00000374217 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
UBXN11-204ENST00000374217 KCNQ3O43525 872 aa18.25■□□□□ 0.51
UBXN11-204ENST00000374217 EIF4A1P60842 406 aaKnown RBP18.25■□□□□ 0.51
UBXN11-204ENST00000374217 SLC39A6Q13433 755 aa18.25■□□□□ 0.51
UBXN11-204ENST00000374217 ZSCAN23Q3MJ62 389 aa18.25■□□□□ 0.51
UBXN11-204ENST00000374217 ZKSCAN5Q9Y2L8 839 aa18.25■□□□□ 0.51
UBXN11-204ENST00000374217 KDM3BQ7LBC6 1761 aa18.24■□□□□ 0.51
UBXN11-204ENST00000374217 ONECUT3O60422 494 aaPredicted RBP18.24■□□□□ 0.51
UBXN11-204ENST00000374217 SEPT12Q8IYM1 358 aa18.24■□□□□ 0.51
UBXN11-204ENST00000374217 CCDC39Q9UFE4 941 aa18.24■□□□□ 0.51
UBXN11-204ENST00000374217 KAT6BQ8WYB5 2073 aa18.24■□□□□ 0.51
UBXN11-204ENST00000374217 CD2BP2O95400 341 aaKnown RBP18.23■□□□□ 0.51
UBXN11-204ENST00000374217 RBM6P78332 1123 aaKnown RBP18.23■□□□□ 0.51
UBXN11-204ENST00000374217 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
UBXN11-204ENST00000374217 ZBTB7BO15156 539 aaPredicted RBP18.23■□□□□ 0.51
UBXN11-204ENST00000374217 ANKRD45Q5TZF3 282 aa18.23■□□□□ 0.51
UBXN11-204ENST00000374217 SMAP1Q8IYB5 467 aaPredicted RBP18.23■□□□□ 0.51
UBXN11-204ENST00000374217 CHMP4AQ9BY43 222 aa18.23■□□□□ 0.51
UBXN11-204ENST00000374217 LMBRD1Q9NUN5 540 aa18.23■□□□□ 0.51
UBXN11-204ENST00000374217 THSD7AQ9UPZ6 1657 aa18.22■□□□□ 0.51
UBXN11-204ENST00000374217 PRIM1P49642 420 aaKnown RBP18.21■□□□□ 0.51
UBXN11-204ENST00000374217 FMNL2Q96PY5 1086 aa18.21■□□□□ 0.51
UBXN11-204ENST00000374217 PIGBQ92521 554 aa18.21■□□□□ 0.51
UBXN11-204ENST00000374217 ACSBG1Q96GR2 724 aa18.21■□□□□ 0.51
UBXN11-204ENST00000374217 TOGARAM1Q9Y4F4 1720 aa18.2■□□□□ 0.5
UBXN11-204ENST00000374217 MBD3O95983 291 aa18.2■□□□□ 0.5
UBXN11-204ENST00000374217 HOXB7P09629 217 aa18.2■□□□□ 0.5
UBXN11-204ENST00000374217 SASS6Q6UVJ0 657 aa18.2■□□□□ 0.5
UBXN11-204ENST00000374217 STK31Q9BXU1 1019 aa18.2■□□□□ 0.5
UBXN11-204ENST00000374217 RXRBP28702 533 aa18.19■□□□□ 0.5
UBXN11-204ENST00000374217 CCDC30Q5VVM6 783 aa18.19■□□□□ 0.5
UBXN11-204ENST00000374217 LRSAM1Q6UWE0 723 aa18.19■□□□□ 0.5
UBXN11-204ENST00000374217 ABCC4O15439 1325 aa18.19■□□□□ 0.5
UBXN11-204ENST00000374217 ST18O60284 1047 aa18.19■□□□□ 0.5
UBXN11-204ENST00000374217 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
UBXN11-204ENST00000374217 HDGFL1Q5TGJ6 251 aa18.19■□□□□ 0.5
UBXN11-204ENST00000374217 MCTP1Q6DN14 999 aa18.19■□□□□ 0.5
UBXN11-204ENST00000374217 CAVIN1Q6NZI2 390 aaKnown RBP18.19■□□□□ 0.5
UBXN11-204ENST00000374217 KLHL34Q8N239 644 aa18.19■□□□□ 0.5
UBXN11-204ENST00000374217 NECTIN2Q92692 538 aa18.19■□□□□ 0.5
UBXN11-204ENST00000374217 ZNF496Q96IT1 587 aaPredicted RBP18.19■□□□□ 0.5
UBXN11-204ENST00000374217 R3HCC1Q9Y3T6 440 aaKnown RBP18.19■□□□□ 0.5
UBXN11-204ENST00000374217 UQCRHLA0A096LP55 91 aa18.18■□□□□ 0.5
UBXN11-204ENST00000374217 GIGYF1O75420 1035 aaPredicted RBP18.18■□□□□ 0.5
UBXN11-204ENST00000374217 UQCRHP07919 91 aa18.18■□□□□ 0.5
UBXN11-204ENST00000374217 INTS3Q68E01 1043 aaKnown RBP18.18■□□□□ 0.5
UBXN11-204ENST00000374217 BCL9O00512 1426 aa18.18■□□□□ 0.5
UBXN11-204ENST00000374217 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
UBXN11-204ENST00000374217 SNRPA1P09661 255 aaKnown RBP18.17■□□□□ 0.5
UBXN11-204ENST00000374217 ITGB4P16144 1822 aa18.17■□□□□ 0.5
UBXN11-204ENST00000374217 CASC1Q6TDU7 716 aa18.17■□□□□ 0.5
UBXN11-204ENST00000374217 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.17■□□□□ 0.5
UBXN11-204ENST00000374217 PTCD1O75127 700 aaKnown RBP18.16■□□□□ 0.5
UBXN11-204ENST00000374217 MRPL50Q8N5N7 158 aaKnown RBP18.16■□□□□ 0.5
UBXN11-204ENST00000374217 RBSNQ9H1K0 784 aa18.16■□□□□ 0.5
UBXN11-204ENST00000374217 SLC4A2P04920 1241 aa18.16■□□□□ 0.5
UBXN11-204ENST00000374217 FAM182BQ5T319 152 aa18.16■□□□□ 0.5
UBXN11-204ENST00000374217 PRDM4Q9UKN5 801 aa18.16■□□□□ 0.5
UBXN11-204ENST00000374217 ASAP1Q9ULH1 1129 aa18.16■□□□□ 0.5
UBXN11-204ENST00000374217 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
UBXN11-204ENST00000374217 KRT27Q7Z3Y8 459 aa18.15■□□□□ 0.5
UBXN11-204ENST00000374217 ATG3Q9NT62 314 aa18.15■□□□□ 0.5
UBXN11-204ENST00000374217 SRCAPQ6ZRS2 3230 aa18.14■□□□□ 0.5
UBXN11-204ENST00000374217 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.5
UBXN11-204ENST00000374217 USP26Q9BXU7 913 aa18.14■□□□□ 0.5
UBXN11-204ENST00000374217 API5Q9BZZ5 524 aaKnown RBP18.14■□□□□ 0.5
UBXN11-204ENST00000374217 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.5
UBXN11-204ENST00000374217 TTC22Q5TAA0 569 aa18.14■□□□□ 0.49
UBXN11-204ENST00000374217 AK9Q5TCS8 1911 aa18.13■□□□□ 0.49
UBXN11-204ENST00000374217 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
UBXN11-204ENST00000374217 KCNQ2O43526 872 aa18.13■□□□□ 0.49
UBXN11-204ENST00000374217 MCM2P49736 904 aa18.13■□□□□ 0.49
UBXN11-204ENST00000374217 SYAP1Q96A49 352 aaPredicted RBP18.13■□□□□ 0.49
UBXN11-204ENST00000374217 FAM13BQ9NYF5 915 aa18.13■□□□□ 0.49
UBXN11-204ENST00000374217 PAPPAQ13219 1627 aa18.12■□□□□ 0.49
UBXN11-204ENST00000374217 REC8O95072 547 aa18.12■□□□□ 0.49
UBXN11-204ENST00000374217 NCLP19338 710 aaKnown RBP18.12■□□□□ 0.49
UBXN11-204ENST00000374217 UTP14CQ5TAP6 766 aaKnown RBP18.12■□□□□ 0.49
UBXN11-204ENST00000374217 PLEKHM2Q8IWE5 1019 aa18.12■□□□□ 0.49
UBXN11-204ENST00000374217 PRIMPOLQ96LW4 560 aa18.12■□□□□ 0.49
UBXN11-204ENST00000374217 DCTPP1Q9H773 170 aa18.12■□□□□ 0.49
UBXN11-204ENST00000374217 DBF4Q9UBU7 674 aaPredicted RBP18.12■□□□□ 0.49
UBXN11-204ENST00000374217 PHF14O94880 888 aa18.11■□□□□ 0.49
UBXN11-204ENST00000374217 GSPT1P15170 499 aaKnown RBP18.11■□□□□ 0.49
UBXN11-204ENST00000374217 HMGN5P82970 282 aaKnown RBP18.11■□□□□ 0.49
UBXN11-204ENST00000374217 FAM196AQ6ZSG2 479 aa18.11■□□□□ 0.49
UBXN11-204ENST00000374217 SMARCC1Q92922 1105 aaPredicted RBP18.11■□□□□ 0.49
UBXN11-204ENST00000374217 CHPF2Q9P2E5 772 aa18.11■□□□□ 0.49
UBXN11-204ENST00000374217 SIRT2Q8IXJ6 389 aa18.1■□□□□ 0.49
UBXN11-204ENST00000374217 FAM184AQ8NB25 1140 aa18.1■□□□□ 0.49
UBXN11-204ENST00000374217 TEX13AQ9BXU3 409 aaPredicted RBP18.1■□□□□ 0.49
UBXN11-204ENST00000374217 KCPQ6ZWJ8 1503 aa18.1■□□□□ 0.49
UBXN11-204ENST00000374217 UBR2Q8IWV8 1755 aa18.1■□□□□ 0.49
UBXN11-204ENST00000374217 RBM10P98175 930 aaKnown RBP18.09■□□□□ 0.49
UBXN11-204ENST00000374217 KIAA2012Q0VF49 1180 aa18.09■□□□□ 0.49
UBXN11-204ENST00000374217 GPT2Q8TD30 523 aa18.09■□□□□ 0.49
UBXN11-204ENST00000374217 UPF1Q92900 1129 aaKnown RBP eCLIP18.09■□□□□ 0.49
UBXN11-204ENST00000374217 USP16Q9Y5T5 823 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms