RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 ZBTB3Q9H5J0 574 aa22.26■■□□□ 1.15
C9orf43-202ENST00000374165 GNPATO15228 680 aa22.25■■□□□ 1.15
C9orf43-202ENST00000374165 MVPQ14764 893 aaKnown RBP22.25■■□□□ 1.15
C9orf43-202ENST00000374165 RC3H1Q5TC82 1133 aaKnown RBP22.25■■□□□ 1.15
C9orf43-202ENST00000374165 RIC3Q7Z5B4 369 aa22.25■■□□□ 1.15
C9orf43-202ENST00000374165 ITPRIPQ8IWB1 547 aa22.25■■□□□ 1.15
C9orf43-202ENST00000374165 ARFGEF2Q9Y6D5 1785 aa22.25■■□□□ 1.15
C9orf43-202ENST00000374165 INTS3Q68E01 1043 aaKnown RBP22.24■■□□□ 1.15
C9orf43-202ENST00000374165 DDX58O95786 925 aaKnown RBP22.24■■□□□ 1.15
C9orf43-202ENST00000374165 PLBD2Q8NHP8 589 aa22.24■■□□□ 1.15
C9orf43-202ENST00000374165 NUP188Q5SRE5 1749 aa22.24■■□□□ 1.15
C9orf43-202ENST00000374165 RGPD3A6NKT7 1758 aaPredicted RBP22.23■■□□□ 1.15
C9orf43-202ENST00000374165 RGPD4Q7Z3J3 1758 aa22.23■■□□□ 1.15
C9orf43-202ENST00000374165 MS4A1P11836 297 aa22.23■■□□□ 1.15
C9orf43-202ENST00000374165 RPS6KA4O75676 772 aa22.23■■□□□ 1.15
C9orf43-202ENST00000374165 BEND3Q5T5X7 828 aa22.23■■□□□ 1.15
C9orf43-202ENST00000374165 HLFQ16534 295 aa22.22■■□□□ 1.15
C9orf43-202ENST00000374165 DZIP3Q86Y13 1208 aaKnown RBP22.22■■□□□ 1.15
C9orf43-202ENST00000374165 CCDC136Q96JN2 1154 aa22.22■■□□□ 1.15
C9orf43-202ENST00000374165 UBR3Q6ZT12 1888 aa22.22■■□□□ 1.15
C9orf43-202ENST00000374165 COL15A1P39059 1388 aa22.22■■□□□ 1.15
C9orf43-202ENST00000374165 SF3B2Q13435 895 aaKnown RBP22.21■■□□□ 1.15
C9orf43-202ENST00000374165 CWF19L2Q2TBE0 894 aaKnown RBP22.21■■□□□ 1.15
C9orf43-202ENST00000374165 ZBTB7BO15156 539 aaPredicted RBP22.2■■□□□ 1.14
C9orf43-202ENST00000374165 IGKV5-2P06315 115 aa22.2■■□□□ 1.14
C9orf43-202ENST00000374165 ZNF827Q17R98 1081 aa22.2■■□□□ 1.14
C9orf43-202ENST00000374165 AK7Q96M32 723 aa22.2■■□□□ 1.14
C9orf43-202ENST00000374165 METTL22Q9BUU2 404 aaPredicted RBP22.2■■□□□ 1.14
C9orf43-202ENST00000374165 NUP98P52948 1817 aa22.2■■□□□ 1.14
C9orf43-202ENST00000374165 MAP3K15Q6ZN16 1313 aa22.2■■□□□ 1.14
C9orf43-202ENST00000374165 ATP5J2-PTCD1G3V325 749 aa22.19■■□□□ 1.14
C9orf43-202ENST00000374165 PHF14O94880 888 aa22.19■■□□□ 1.14
C9orf43-202ENST00000374165 MYD88Q99836 296 aa22.19■■□□□ 1.14
C9orf43-202ENST00000374165 RTCBQ9Y3I0 505 aaKnown RBP22.19■■□□□ 1.14
C9orf43-202ENST00000374165 N4BP2Q86UW6 1770 aaPredicted RBP22.19■■□□□ 1.14
C9orf43-202ENST00000374165 KIF6Q6ZMV9 814 aa22.19■■□□□ 1.14
C9orf43-202ENST00000374165 ILDR2Q71H61 639 aa22.19■■□□□ 1.14
C9orf43-202ENST00000374165 NPM2Q86SE8 214 aaKnown RBP22.19■■□□□ 1.14
C9orf43-202ENST00000374165 BAG6P46379 1132 aa22.18■■□□□ 1.14
C9orf43-202ENST00000374165 CCT4P50991 539 aaKnown RBP22.18■■□□□ 1.14
C9orf43-202ENST00000374165 ARHGEF1Q92888 912 aaKnown RBP22.18■■□□□ 1.14
C9orf43-202ENST00000374165 PXDNLA1KZ92 1463 aa22.18■■□□□ 1.14
C9orf43-202ENST00000374165 DDX19BQ9UMR2 479 aa22.18■■□□□ 1.14
C9orf43-202ENST00000374165 CAMTA2O94983 1202 aa22.17■■□□□ 1.14
C9orf43-202ENST00000374165 AKT1S1Q96B36 256 aa22.17■■□□□ 1.14
C9orf43-202ENST00000374165 SRCIN1Q9C0H9 1055 aa22.17■■□□□ 1.14
C9orf43-202ENST00000374165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.16■■□□□ 1.14
C9orf43-202ENST00000374165 MEIS3Q99687 375 aa22.16■■□□□ 1.14
C9orf43-202ENST00000374165 USP44Q9H0E7 712 aa22.16■■□□□ 1.14
C9orf43-202ENST00000374165 ATP10DQ9P241 1426 aa22.16■■□□□ 1.14
C9orf43-202ENST00000374165 C4AP0C0L4 1744 aa22.16■■□□□ 1.14
C9orf43-202ENST00000374165 GIGYF2Q6Y7W6 1299 aaKnown RBP22.16■■□□□ 1.14
C9orf43-202ENST00000374165 CCDC125Q86Z20 511 aa22.16■■□□□ 1.14
C9orf43-202ENST00000374165 LINS1Q8NG48 757 aa22.16■■□□□ 1.14
C9orf43-202ENST00000374165 UPF1Q92900 1129 aaKnown RBP eCLIP22.16■■□□□ 1.14
C9orf43-202ENST00000374165 ANO8Q9HCE9 1232 aaPredicted RBP22.16■■□□□ 1.14
C9orf43-202ENST00000374165 ZBTB40Q9NUA8 1239 aa22.16■■□□□ 1.14
C9orf43-202ENST00000374165 SRP68Q9UHB9 627 aaKnown RBP22.16■■□□□ 1.14
C9orf43-202ENST00000374165 TUBGCP6Q96RT7 1819 aa22.15■■□□□ 1.14
C9orf43-202ENST00000374165 AFDNP55196 1824 aaKnown RBP22.15■■□□□ 1.14
C9orf43-202ENST00000374165 NEURL1BA8MQ27 555 aa22.14■■□□□ 1.14
C9orf43-202ENST00000374165 ERVV-1B6SEH8 477 aa22.14■■□□□ 1.14
C9orf43-202ENST00000374165 TCIRG1Q13488 830 aa22.14■■□□□ 1.14
C9orf43-202ENST00000374165 NEXNQ0ZGT2 675 aa22.14■■□□□ 1.13
C9orf43-202ENST00000374165 TRAPPC3LQ5T215 181 aa22.14■■□□□ 1.13
C9orf43-202ENST00000374165 TFCP2L1Q9NZI6 479 aa22.14■■□□□ 1.13
C9orf43-202ENST00000374165 NBPF7P0C2Y1 421 aaPredicted RBP22.13■■□□□ 1.13
C9orf43-202ENST00000374165 C1orf115Q9H7X2 142 aa22.13■■□□□ 1.13
C9orf43-202ENST00000374165 BCL2L12Q9HB09 334 aa22.13■■□□□ 1.13
C9orf43-202ENST00000374165 GPTP24298 496 aa22.13■■□□□ 1.13
C9orf43-202ENST00000374165 USPL1Q5W0Q7 1092 aa22.13■■□□□ 1.13
C9orf43-202ENST00000374165 BCORQ6W2J9 1755 aa22.13■■□□□ 1.13
C9orf43-202ENST00000374165 JARID2Q92833 1246 aaPredicted RBP22.12■■□□□ 1.13
C9orf43-202ENST00000374165 NARFQ9UHQ1 456 aa22.12■■□□□ 1.13
C9orf43-202ENST00000374165 ALDH1L1O75891 902 aa22.11■■□□□ 1.13
C9orf43-202ENST00000374165 GCKRQ14397 625 aa22.11■■□□□ 1.13
C9orf43-202ENST00000374165 ISCA1Q9BUE6 129 aa22.11■■□□□ 1.13
C9orf43-202ENST00000374165 ANKRD36CQ5JPF3 1778 aa22.11■■□□□ 1.13
C9orf43-202ENST00000374165 A0A087WZG4 1122 aa22.11■■□□□ 1.13
C9orf43-202ENST00000374165 RFC4P35249 363 aa22.11■■□□□ 1.13
C9orf43-202ENST00000374165 PCDHB15Q9Y5E8 787 aa22.11■■□□□ 1.13
C9orf43-202ENST00000374165 SSFA2P28290 1259 aa22.1■■□□□ 1.13
C9orf43-202ENST00000374165 UBN2Q6ZU65 1347 aa22.1■■□□□ 1.13
C9orf43-202ENST00000374165 USP42Q9H9J4 1324 aaKnown RBP22.1■■□□□ 1.13
C9orf43-202ENST00000374165 SCN7AQ01118 1682 aa22.09■■□□□ 1.13
C9orf43-202ENST00000374165 ZPR1O75312 459 aa22.09■■□□□ 1.13
C9orf43-202ENST00000374165 ADRA2BP18089 450 aa22.09■■□□□ 1.13
C9orf43-202ENST00000374165 COL23A1Q86Y22 540 aaPredicted RBP22.09■■□□□ 1.13
C9orf43-202ENST00000374165 ZNF34Q8IZ26 560 aa22.09■■□□□ 1.13
C9orf43-202ENST00000374165 RTL5Q5HYW3 569 aaPredicted RBP22.08■■□□□ 1.13
C9orf43-202ENST00000374165 GRM8O00222 908 aa22.07■■□□□ 1.12
C9orf43-202ENST00000374165 SLC15A2Q16348 729 aa22.07■■□□□ 1.12
C9orf43-202ENST00000374165 C9orf78Q9NZ63 289 aaPredicted RBP22.07■■□□□ 1.12
C9orf43-202ENST00000374165 PNPLA7Q6ZV29 1317 aa22.07■■□□□ 1.12
C9orf43-202ENST00000374165 TRIM28Q13263 835 aaKnown RBP22.07■■□□□ 1.12
C9orf43-202ENST00000374165 NLRP10Q86W26 655 aa22.07■■□□□ 1.12
C9orf43-202ENST00000374165 CCDC191Q8NCU4 936 aa22.07■■□□□ 1.12
C9orf43-202ENST00000374165 TBC1D9BQ66K14 1250 aa22.06■■□□□ 1.12
C9orf43-202ENST00000374165 CLEC4GQ6UXB4 293 aa22.06■■□□□ 1.12
C9orf43-202ENST00000374165 SYNE4Q8N205 404 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms