RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 PAXIP1Q6ZW49 1069 aaPredicted RBP17.27■□□□□ 0.36
HDAC8-204ENST00000373560 CNTROBQ8N137 903 aa17.27■□□□□ 0.36
HDAC8-204ENST00000373560 COL15A1P39059 1388 aa17.27■□□□□ 0.35
HDAC8-204ENST00000373560 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
HDAC8-204ENST00000373560 PRPF38BQ5VTL8 546 aaKnown RBP17.26■□□□□ 0.35
HDAC8-204ENST00000373560 DNAJC10Q8IXB1 793 aa17.26■□□□□ 0.35
HDAC8-204ENST00000373560 TESK2Q96S53 571 aa17.26■□□□□ 0.35
HDAC8-204ENST00000373560 SCN7AQ01118 1682 aa17.26■□□□□ 0.35
HDAC8-204ENST00000373560 RNF123Q5XPI4 1314 aa17.25■□□□□ 0.35
HDAC8-204ENST00000373560 EPHX2P34913 555 aa17.25■□□□□ 0.35
HDAC8-204ENST00000373560 GPR101Q96P66 508 aaPredicted RBP17.25■□□□□ 0.35
HDAC8-204ENST00000373560 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
HDAC8-204ENST00000373560 SCN11AQ9UI33 1791 aa17.24■□□□□ 0.35
HDAC8-204ENST00000373560 CABP4P57796 275 aa17.23■□□□□ 0.35
HDAC8-204ENST00000373560 BICDL1Q6ZP65 573 aa17.23■□□□□ 0.35
HDAC8-204ENST00000373560 BEGAINQ9BUH8 593 aa17.23■□□□□ 0.35
HDAC8-204ENST00000373560 NARFQ9UHQ1 456 aa17.23■□□□□ 0.35
HDAC8-204ENST00000373560 HACL1Q9UJ83 578 aa17.23■□□□□ 0.35
HDAC8-204ENST00000373560 ZBTB1Q9Y2K1 713 aa17.22■□□□□ 0.35
HDAC8-204ENST00000373560 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.34
HDAC8-204ENST00000373560 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
HDAC8-204ENST00000373560 COL4A5P29400 1685 aa17.2■□□□□ 0.34
HDAC8-204ENST00000373560 TRAF5O00463 557 aa17.2■□□□□ 0.34
HDAC8-204ENST00000373560 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
HDAC8-204ENST00000373560 CST9Q5W186 159 aa17.2■□□□□ 0.34
HDAC8-204ENST00000373560 PRPF40BQ6NWY9 871 aaKnown RBP17.2■□□□□ 0.34
HDAC8-204ENST00000373560 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
HDAC8-204ENST00000373560 PRR29P0C7W0 189 aa17.19■□□□□ 0.34
HDAC8-204ENST00000373560 CYP19A1P11511 503 aaPredicted RBP17.19■□□□□ 0.34
HDAC8-204ENST00000373560 EIF4A2Q14240 407 aaKnown RBP17.19■□□□□ 0.34
HDAC8-204ENST00000373560 PRR5LQ6MZQ0 368 aa17.19■□□□□ 0.34
HDAC8-204ENST00000373560 ZNF530Q6P9A1 599 aaPredicted RBP17.19■□□□□ 0.34
HDAC8-204ENST00000373560 OLFM4Q6UX06 510 aa17.19■□□□□ 0.34
HDAC8-204ENST00000373560 ECE1P42892 770 aa17.18■□□□□ 0.34
HDAC8-204ENST00000373560 TBC1D9BQ66K14 1250 aa17.18■□□□□ 0.34
HDAC8-204ENST00000373560 ZNF277Q9NRM2 450 aaPredicted RBP17.18■□□□□ 0.34
HDAC8-204ENST00000373560 TLL2Q9Y6L7 1015 aa17.17■□□□□ 0.34
HDAC8-204ENST00000373560 ST20-MTHFSA0A0A6YYL1 179 aa17.16■□□□□ 0.34
HDAC8-204ENST00000373560 BRIP1Q9BX63 1249 aa17.16■□□□□ 0.34
HDAC8-204ENST00000373560 CARD14Q9BXL6 1004 aa17.16■□□□□ 0.34
HDAC8-204ENST00000373560 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
HDAC8-204ENST00000373560 C7orf43Q8WVR3 580 aa17.15■□□□□ 0.34
HDAC8-204ENST00000373560 ZIC5Q96T25 663 aa17.15■□□□□ 0.34
HDAC8-204ENST00000373560 UBR2Q8IWV8 1755 aa17.15■□□□□ 0.34
HDAC8-204ENST00000373560 PDE6BP35913 854 aa17.14■□□□□ 0.33
HDAC8-204ENST00000373560 PNMA8AQ86V59 439 aaPredicted RBP17.14■□□□□ 0.33
HDAC8-204ENST00000373560 MAP2K2P36507 400 aa17.13■□□□□ 0.33
HDAC8-204ENST00000373560 MTHFSP49914 203 aa17.13■□□□□ 0.33
HDAC8-204ENST00000373560 CIAPIN1Q6FI81 312 aa17.13■□□□□ 0.33
HDAC8-204ENST00000373560 POLKQ9UBT6 870 aa17.13■□□□□ 0.33
HDAC8-204ENST00000373560 MRC1P22897 1456 aa17.12■□□□□ 0.33
HDAC8-204ENST00000373560 SRGNP10124 158 aa17.12■□□□□ 0.33
HDAC8-204ENST00000373560 SLC39A6Q13433 755 aa17.12■□□□□ 0.33
HDAC8-204ENST00000373560 BRPF1P55201 1214 aaPredicted RBP17.11■□□□□ 0.33
HDAC8-204ENST00000373560 FKBP4Q02790 459 aaKnown RBP eCLIP17.11■□□□□ 0.33
HDAC8-204ENST00000373560 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
HDAC8-204ENST00000373560 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
HDAC8-204ENST00000373560 CNKSR1Q969H4 720 aa17.11■□□□□ 0.33
HDAC8-204ENST00000373560 FZD9O00144 591 aa17.1■□□□□ 0.33
HDAC8-204ENST00000373560 CA12O43570 354 aa17.1■□□□□ 0.33
HDAC8-204ENST00000373560 CANXP27824 592 aaKnown RBP17.1■□□□□ 0.33
HDAC8-204ENST00000373560 EPS15P42566 896 aa17.1■□□□□ 0.33
HDAC8-204ENST00000373560 PLEKHO1Q53GL0 409 aaPredicted RBP17.1■□□□□ 0.33
HDAC8-204ENST00000373560 CCDC93Q567U6 631 aa17.1■□□□□ 0.33
HDAC8-204ENST00000373560 SNED1Q8TER0 1413 aa17.1■□□□□ 0.33
HDAC8-204ENST00000373560 SAPCD2Q86UD0 394 aa17.09■□□□□ 0.33
HDAC8-204ENST00000373560 SCNN1DP51172 638 aa17.08■□□□□ 0.32
HDAC8-204ENST00000373560 SLC51AQ86UW1 340 aa17.08■□□□□ 0.32
HDAC8-204ENST00000373560 IARSP41252 1262 aaKnown RBP17.07■□□□□ 0.32
HDAC8-204ENST00000373560 SOGA3Q5TF21 947 aa17.07■□□□□ 0.32
HDAC8-204ENST00000373560 GPC2Q8N158 579 aa17.07■□□□□ 0.32
HDAC8-204ENST00000373560 MASTLQ96GX5 879 aa17.07■□□□□ 0.32
HDAC8-204ENST00000373560 PDZRN3Q9UPQ7 1066 aa17.07■□□□□ 0.32
HDAC8-204ENST00000373560 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
HDAC8-204ENST00000373560 HABP4Q5JVS0 413 aaKnown RBP17.06■□□□□ 0.32
HDAC8-204ENST00000373560 FBXO3Q9UK99 471 aa17.06■□□□□ 0.32
HDAC8-204ENST00000373560 GJA3Q9Y6H8 435 aa17.06■□□□□ 0.32
HDAC8-204ENST00000373560 C1orf141Q5JVX7 400 aa17.05■□□□□ 0.32
HDAC8-204ENST00000373560 CNBD1Q8NA66 436 aa17.05■□□□□ 0.32
HDAC8-204ENST00000373560 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
HDAC8-204ENST00000373560 TBC1D2BQ9UPU7 963 aa17.05■□□□□ 0.32
HDAC8-204ENST00000373560 CELF2O95319 508 aaKnown RBP17.04■□□□□ 0.32
HDAC8-204ENST00000373560 TNNT2P45379 298 aaPredicted RBP17.04■□□□□ 0.32
HDAC8-204ENST00000373560 SLC52A2Q9HAB3 445 aa17.04■□□□□ 0.32
HDAC8-204ENST00000373560 SYNE4Q8N205 404 aa17.03■□□□□ 0.32
HDAC8-204ENST00000373560 PIP4P2Q8N4L2 257 aa17.03■□□□□ 0.32
HDAC8-204ENST00000373560 GLIS2Q9BZE0 524 aaPredicted RBP17.03■□□□□ 0.32
HDAC8-204ENST00000373560 AMOTQ4VCS5 1084 aa17.02■□□□□ 0.32
HDAC8-204ENST00000373560 ZNF408Q9H9D4 720 aa17.01■□□□□ 0.31
HDAC8-204ENST00000373560 ZNF330Q9Y3S2 320 aaPredicted RBP17.01■□□□□ 0.31
HDAC8-204ENST00000373560 MKI67P46013 3256 aaKnown RBP17■□□□□ 0.31
HDAC8-204ENST00000373560 CAMTA2O94983 1202 aa17■□□□□ 0.31
HDAC8-204ENST00000373560 LMOD1P29536 600 aaPredicted RBP17■□□□□ 0.31
HDAC8-204ENST00000373560 FXR2P51116 673 aaKnown RBP eCLIP17■□□□□ 0.31
HDAC8-204ENST00000373560 ST5P78524 1137 aa17■□□□□ 0.31
HDAC8-204ENST00000373560 DLK2Q6UY11 383 aa17■□□□□ 0.31
HDAC8-204ENST00000373560 HHIPL1Q96JK4 782 aa16.99■□□□□ 0.31
HDAC8-204ENST00000373560 HPS5Q9UPZ3 1129 aa16.99■□□□□ 0.31
HDAC8-204ENST00000373560 AKAP11Q9UKA4 1901 aa16.98■□□□□ 0.31
HDAC8-204ENST00000373560 NPHP1O15259 732 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms