RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 KIF13BQ9NQT8 1826 aa23.66■■□□□ 1.38
PBX3-205ENST00000373492 TBC1D9BQ66K14 1250 aa23.66■■□□□ 1.38
PBX3-205ENST00000373492 NECTIN2Q92692 538 aa23.66■■□□□ 1.38
PBX3-205ENST00000373492 ZNF652Q9Y2D9 606 aa23.66■■□□□ 1.38
PBX3-205ENST00000373492 MYL6BP14649 208 aa23.65■■□□□ 1.38
PBX3-205ENST00000373492 TWISTNBQ3B726 338 aaPredicted RBP23.65■■□□□ 1.38
PBX3-205ENST00000373492 SERPINB2P05120 415 aa23.64■■□□□ 1.37
PBX3-205ENST00000373492 SLFN5Q08AF3 891 aa23.64■■□□□ 1.37
PBX3-205ENST00000373492 BICDL1Q6ZP65 573 aa23.64■■□□□ 1.37
PBX3-205ENST00000373492 PELP1Q8IZL8 1130 aaKnown RBP23.64■■□□□ 1.37
PBX3-205ENST00000373492 TSPYL6Q8N831 410 aa23.64■■□□□ 1.37
PBX3-205ENST00000373492 GOLGB1Q14789 3259 aaKnown RBP23.63■■□□□ 1.37
PBX3-205ENST00000373492 EXOSC9Q06265 439 aaKnown RBP23.63■■□□□ 1.37
PBX3-205ENST00000373492 SETDB2Q96T68 719 aa23.63■■□□□ 1.37
PBX3-205ENST00000373492 DBF4Q9UBU7 674 aaPredicted RBP23.63■■□□□ 1.37
PBX3-205ENST00000373492 ANKRD36CQ5JPF3 1778 aa23.63■■□□□ 1.37
PBX3-205ENST00000373492 PXDNLA1KZ92 1463 aa23.62■■□□□ 1.37
PBX3-205ENST00000373492 AFDNP55196 1824 aaKnown RBP23.62■■□□□ 1.37
PBX3-205ENST00000373492 GRIN3BO60391 1043 aa23.62■■□□□ 1.37
PBX3-205ENST00000373492 CCDC30Q5VVM6 783 aa23.62■■□□□ 1.37
PBX3-205ENST00000373492 DDX21Q9NR30 783 aaKnown RBP eCLIP23.62■■□□□ 1.37
PBX3-205ENST00000373492 CARMIL3Q8ND23 1372 aa23.62■■□□□ 1.37
PBX3-205ENST00000373492 ERVV-1B6SEH8 477 aa23.61■■□□□ 1.37
PBX3-205ENST00000373492 PDIA6Q15084 440 aa23.61■■□□□ 1.37
PBX3-205ENST00000373492 CDCA7LQ96GN5 454 aa23.61■■□□□ 1.37
PBX3-205ENST00000373492 CHPF2Q9P2E5 772 aa23.61■■□□□ 1.37
PBX3-205ENST00000373492 ZBED9Q6R2W3 1325 aa23.6■■□□□ 1.37
PBX3-205ENST00000373492 NRXN2Q9P2S2 1712 aa23.6■■□□□ 1.37
PBX3-205ENST00000373492 YBX3P16989 372 aaKnown RBP eCLIP23.6■■□□□ 1.37
PBX3-205ENST00000373492 KIF6Q6ZMV9 814 aa23.6■■□□□ 1.37
PBX3-205ENST00000373492 ARFGEF2Q9Y6D5 1785 aa23.6■■□□□ 1.37
PBX3-205ENST00000373492 MAP3K15Q6ZN16 1313 aa23.59■■□□□ 1.37
PBX3-205ENST00000373492 A0A0G2JLW4 131 aa23.59■■□□□ 1.37
PBX3-205ENST00000373492 DPEP1P16444 411 aa23.59■■□□□ 1.37
PBX3-205ENST00000373492 LRP10Q7Z4F1 713 aa23.59■■□□□ 1.37
PBX3-205ENST00000373492 STK31Q9BXU1 1019 aa23.59■■□□□ 1.37
PBX3-205ENST00000373492 ANXA1P04083 346 aa23.58■■□□□ 1.37
PBX3-205ENST00000373492 TTLL7Q6ZT98 887 aa23.58■■□□□ 1.37
PBX3-205ENST00000373492 HYPKQ9NX55 129 aa23.58■■□□□ 1.37
PBX3-205ENST00000373492 VAMP4O75379 141 aa23.57■■□□□ 1.36
PBX3-205ENST00000373492 HLFQ16534 295 aa23.57■■□□□ 1.36
PBX3-205ENST00000373492 PROSER3Q2NL68 480 aa23.57■■□□□ 1.36
PBX3-205ENST00000373492 TRMT2AQ8IZ69 625 aaKnown RBP23.57■■□□□ 1.36
PBX3-205ENST00000373492 KIAA1551Q9HCM1 1747 aa23.56■■□□□ 1.36
PBX3-205ENST00000373492 NIP7Q9Y221 180 aaKnown RBP eCLIP23.56■■□□□ 1.36
PBX3-205ENST00000373492 KCNA3P22001 575 aa23.55■■□□□ 1.36
PBX3-205ENST00000373492 PRR5LQ6MZQ0 368 aa23.55■■□□□ 1.36
PBX3-205ENST00000373492 AIMP1Q12904 312 aaKnown RBP23.54■■□□□ 1.36
PBX3-205ENST00000373492 CNBD1Q8NA66 436 aa23.54■■□□□ 1.36
PBX3-205ENST00000373492 BRIP1Q9BX63 1249 aa23.54■■□□□ 1.36
PBX3-205ENST00000373492 PIM2Q9P1W9 311 aa23.54■■□□□ 1.36
PBX3-205ENST00000373492 PDZRN3Q9UPQ7 1066 aa23.54■■□□□ 1.36
PBX3-205ENST00000373492 N4BP2Q86UW6 1770 aaPredicted RBP23.54■■□□□ 1.36
PBX3-205ENST00000373492 NPHP1O15259 732 aa23.53■■□□□ 1.36
PBX3-205ENST00000373492 YY1P25490 414 aa23.53■■□□□ 1.36
PBX3-205ENST00000373492 ST5P78524 1137 aa23.53■■□□□ 1.36
PBX3-205ENST00000373492 COPS6Q7L5N1 327 aa23.53■■□□□ 1.36
PBX3-205ENST00000373492 NBPF5PQ86XG9 351 aaPredicted RBP23.53■■□□□ 1.36
PBX3-205ENST00000373492 XAGE3Q8WTP9 111 aa23.53■■□□□ 1.36
PBX3-205ENST00000373492 ZBTB3Q9H5J0 574 aa23.53■■□□□ 1.36
PBX3-205ENST00000373492 ATP10DQ9P241 1426 aa23.52■■□□□ 1.36
PBX3-205ENST00000373492 CHRNA5P30532 468 aa23.52■■□□□ 1.36
PBX3-205ENST00000373492 TPTE2Q6XPS3 522 aa23.52■■□□□ 1.36
PBX3-205ENST00000373492 GIGYF2Q6Y7W6 1299 aaKnown RBP23.52■■□□□ 1.36
PBX3-205ENST00000373492 WWC3Q9ULE0 1092 aa23.52■■□□□ 1.36
PBX3-205ENST00000373492 PDE6BP35913 854 aa23.51■■□□□ 1.35
PBX3-205ENST00000373492 BCS1LQ9Y276 419 aa23.51■■□□□ 1.35
PBX3-205ENST00000373492 H0YIN7 160 aa23.5■■□□□ 1.35
PBX3-205ENST00000373492 TCERG1O14776 1098 aaKnown RBP23.5■■□□□ 1.35
PBX3-205ENST00000373492 SLC4A2P04920 1241 aa23.5■■□□□ 1.35
PBX3-205ENST00000373492 DALRD3Q5D0E6 543 aaKnown RBP23.5■■□□□ 1.35
PBX3-205ENST00000373492 CT47B1P0C2W7 299 aaPredicted RBP23.49■■□□□ 1.35
PBX3-205ENST00000373492 C2CD5Q86YS7 1000 aa23.49■■□□□ 1.35
PBX3-205ENST00000373492 ZNF34Q8IZ26 560 aa23.49■■□□□ 1.35
PBX3-205ENST00000373492 ZNF428Q96B54 188 aa23.49■■□□□ 1.35
PBX3-205ENST00000373492 PHAXQ9H814 394 aaKnown RBP23.49■■□□□ 1.35
PBX3-205ENST00000373492 DDX58O95786 925 aaKnown RBP23.48■■□□□ 1.35
PBX3-205ENST00000373492 NYXQ9GZU5 481 aa23.48■■□□□ 1.35
PBX3-205ENST00000373492 BRCA1P38398 1863 aaKnown RBP23.47■■□□□ 1.35
PBX3-205ENST00000373492 CHD4Q14839 1912 aa23.47■■□□□ 1.35
PBX3-205ENST00000373492 HSP90AB3PQ58FF7 597 aa23.47■■□□□ 1.35
PBX3-205ENST00000373492 ANKRD13DQ6ZTN6 518 aa23.47■■□□□ 1.35
PBX3-205ENST00000373492 CCDC24Q8N4L8 307 aa23.47■■□□□ 1.35
PBX3-205ENST00000373492 PLBD2Q8NHP8 589 aa23.47■■□□□ 1.35
PBX3-205ENST00000373492 PARP10Q53GL7 1025 aa23.46■■□□□ 1.35
PBX3-205ENST00000373492 IBTKQ9P2D0 1353 aaPredicted RBP23.46■■□□□ 1.35
PBX3-205ENST00000373492 GPTP24298 496 aa23.45■■□□□ 1.34
PBX3-205ENST00000373492 GTF2E1P29083 439 aaPredicted RBP23.45■■□□□ 1.34
PBX3-205ENST00000373492 RIC3Q7Z5B4 369 aa23.45■■□□□ 1.34
PBX3-205ENST00000373492 ANKRD31Q8N7Z5 1873 aa23.45■■□□□ 1.34
PBX3-205ENST00000373492 UBN2Q6ZU65 1347 aa23.44■■□□□ 1.34
PBX3-205ENST00000373492 FAM177BA6PVY3 158 aa23.44■■□□□ 1.34
PBX3-205ENST00000373492 TTLL6Q8N841 843 aa23.44■■□□□ 1.34
PBX3-205ENST00000373492 KLRG2A4D1S0 409 aaPredicted RBP23.43■■□□□ 1.34
PBX3-205ENST00000373492 TCIRG1Q13488 830 aa23.43■■□□□ 1.34
PBX3-205ENST00000373492 ALDH1L2Q3SY69 923 aa23.43■■□□□ 1.34
PBX3-205ENST00000373492 SUSD4Q5VX71 490 aa23.43■■□□□ 1.34
PBX3-205ENST00000373492 PPP1R42Q7Z4L9 355 aa23.43■■□□□ 1.34
PBX3-205ENST00000373492 YTHDC1Q96MU7 727 aaKnown RBP23.43■■□□□ 1.34
PBX3-205ENST00000373492 FLIIQ13045 1269 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms