RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 PTGER2P43116 358 aa23.56■■□□□ 1.36
PBX3-202ENST00000373482 PPP1R1BQ9UD71 204 aaPredicted RBP23.56■■□□□ 1.36
PBX3-202ENST00000373482 FKBP8Q14318 412 aa23.55■■□□□ 1.36
PBX3-202ENST00000373482 SGIP1Q9BQI5 828 aa23.55■■□□□ 1.36
PBX3-202ENST00000373482 MAP3K15Q6ZN16 1313 aa23.55■■□□□ 1.36
PBX3-202ENST00000373482 KIF13BQ9NQT8 1826 aa23.54■■□□□ 1.36
PBX3-202ENST00000373482 AIMP1Q12904 312 aaKnown RBP23.54■■□□□ 1.36
PBX3-202ENST00000373482 CLEC4GQ6UXB4 293 aa23.54■■□□□ 1.36
PBX3-202ENST00000373482 LRP10Q7Z4F1 713 aa23.54■■□□□ 1.36
PBX3-202ENST00000373482 NRXN2Q9P2S2 1712 aa23.53■■□□□ 1.36
PBX3-202ENST00000373482 ERVV-1B6SEH8 477 aa23.53■■□□□ 1.36
PBX3-202ENST00000373482 RGL2O15211 777 aa23.53■■□□□ 1.36
PBX3-202ENST00000373482 TTLL7Q6ZT98 887 aa23.53■■□□□ 1.36
PBX3-202ENST00000373482 COPS6Q7L5N1 327 aa23.53■■□□□ 1.36
PBX3-202ENST00000373482 XAGE3Q8WTP9 111 aa23.53■■□□□ 1.36
PBX3-202ENST00000373482 BCL2L12Q9HB09 334 aa23.53■■□□□ 1.36
PBX3-202ENST00000373482 MMP10P09238 476 aa23.52■■□□□ 1.36
PBX3-202ENST00000373482 PARP3Q9Y6F1 533 aa23.52■■□□□ 1.36
PBX3-202ENST00000373482 ZBTB3Q9H5J0 574 aa23.51■■□□□ 1.35
PBX3-202ENST00000373482 TCERG1O14776 1098 aaKnown RBP23.5■■□□□ 1.35
PBX3-202ENST00000373482 SLC4A2P04920 1241 aa23.5■■□□□ 1.35
PBX3-202ENST00000373482 CT47B1P0C2W7 299 aaPredicted RBP23.49■■□□□ 1.35
PBX3-202ENST00000373482 TM4SF1P30408 202 aa23.49■■□□□ 1.35
PBX3-202ENST00000373482 TBC1D9BQ66K14 1250 aa23.49■■□□□ 1.35
PBX3-202ENST00000373482 ZNF428Q96B54 188 aa23.49■■□□□ 1.35
PBX3-202ENST00000373482 PHAXQ9H814 394 aaKnown RBP23.49■■□□□ 1.35
PBX3-202ENST00000373482 DDX58O95786 925 aaKnown RBP23.48■■□□□ 1.35
PBX3-202ENST00000373482 NFIXQ14938 502 aa23.48■■□□□ 1.35
PBX3-202ENST00000373482 HLFQ16534 295 aa23.48■■□□□ 1.35
PBX3-202ENST00000373482 GIGYF2Q6Y7W6 1299 aaKnown RBP23.48■■□□□ 1.35
PBX3-202ENST00000373482 BICDL1Q6ZP65 573 aa23.48■■□□□ 1.35
PBX3-202ENST00000373482 SETDB2Q96T68 719 aa23.48■■□□□ 1.35
PBX3-202ENST00000373482 ANKRD13DQ6ZTN6 518 aa23.47■■□□□ 1.35
PBX3-202ENST00000373482 PLBD2Q8NHP8 589 aa23.47■■□□□ 1.35
PBX3-202ENST00000373482 CARMIL3Q8ND23 1372 aa23.47■■□□□ 1.35
PBX3-202ENST00000373482 ATP10DQ9P241 1426 aa23.46■■□□□ 1.35
PBX3-202ENST00000373482 NIP7Q9Y221 180 aaKnown RBP eCLIP23.46■■□□□ 1.35
PBX3-202ENST00000373482 POLRMTO00411 1230 aaKnown RBP23.45■■□□□ 1.34
PBX3-202ENST00000373482 HSP90AB3PQ58FF7 597 aa23.45■■□□□ 1.34
PBX3-202ENST00000373482 RIC3Q7Z5B4 369 aa23.45■■□□□ 1.34
PBX3-202ENST00000373482 ANKRD31Q8N7Z5 1873 aa23.45■■□□□ 1.34
PBX3-202ENST00000373482 N4BP2Q86UW6 1770 aaPredicted RBP23.45■■□□□ 1.34
PBX3-202ENST00000373482 DDR1Q08345 913 aa23.44■■□□□ 1.34
PBX3-202ENST00000373482 KLHL34Q8N239 644 aa23.44■■□□□ 1.34
PBX3-202ENST00000373482 SERPINB2P05120 415 aa23.43■■□□□ 1.34
PBX3-202ENST00000373482 ALDH1L2Q3SY69 923 aa23.43■■□□□ 1.34
PBX3-202ENST00000373482 YTHDC1Q96MU7 727 aaKnown RBP23.43■■□□□ 1.34
PBX3-202ENST00000373482 NPHP1O15259 732 aa23.42■■□□□ 1.34
PBX3-202ENST00000373482 FLIIQ13045 1269 aa23.42■■□□□ 1.34
PBX3-202ENST00000373482 FKBP5Q13451 457 aaPredicted RBP23.41■■□□□ 1.34
PBX3-202ENST00000373482 G2E3Q7L622 706 aa23.41■■□□□ 1.34
PBX3-202ENST00000373482 FHDC1Q9C0D6 1143 aaPredicted RBP23.41■■□□□ 1.34
PBX3-202ENST00000373482 DLEC1Q9Y238 1755 aa23.4■■□□□ 1.34
PBX3-202ENST00000373482 GPTP24298 496 aa23.4■■□□□ 1.34
PBX3-202ENST00000373482 TCIRG1Q13488 830 aa23.4■■□□□ 1.34
PBX3-202ENST00000373482 KSR2Q6VAB6 950 aa23.4■■□□□ 1.34
PBX3-202ENST00000373482 ZNF34Q8IZ26 560 aa23.4■■□□□ 1.34
PBX3-202ENST00000373482 CACNA1SQ13698 1873 aa23.4■■□□□ 1.34
PBX3-202ENST00000373482 KIAA1551Q9HCM1 1747 aa23.39■■□□□ 1.34
PBX3-202ENST00000373482 BRCA1P38398 1863 aaKnown RBP23.39■■□□□ 1.34
PBX3-202ENST00000373482 PARP10Q53GL7 1025 aa23.39■■□□□ 1.33
PBX3-202ENST00000373482 NBPF5PQ86XG9 351 aaPredicted RBP23.39■■□□□ 1.33
PBX3-202ENST00000373482 NYXQ9GZU5 481 aa23.39■■□□□ 1.33
PBX3-202ENST00000373482 SMC4Q9NTJ3 1288 aa23.39■■□□□ 1.33
PBX3-202ENST00000373482 CD2APQ9Y5K6 639 aa23.39■■□□□ 1.33
PBX3-202ENST00000373482 C10orf71Q711Q0 1435 aa23.39■■□□□ 1.33
PBX3-202ENST00000373482 PI4KAP2A4QPH2 592 aa23.38■■□□□ 1.33
PBX3-202ENST00000373482 TPTE2Q6XPS3 522 aa23.38■■□□□ 1.33
PBX3-202ENST00000373482 PPP1R42Q7Z4L9 355 aa23.38■■□□□ 1.33
PBX3-202ENST00000373482 MRPL50Q8N5N7 158 aaKnown RBP23.38■■□□□ 1.33
PBX3-202ENST00000373482 PI4KAP1Q8N8J0 262 aa23.38■■□□□ 1.33
PBX3-202ENST00000373482 CNBD1Q8NA66 436 aa23.38■■□□□ 1.33
PBX3-202ENST00000373482 SSH1Q8WYL5 1049 aa23.38■■□□□ 1.33
PBX3-202ENST00000373482 MAP3K2Q9Y2U5 619 aa23.38■■□□□ 1.33
PBX3-202ENST00000373482 MYH3P11055 1940 aa23.37■■□□□ 1.33
PBX3-202ENST00000373482 FAM177BA6PVY3 158 aa23.37■■□□□ 1.33
PBX3-202ENST00000373482 GTF2E1P29083 439 aaPredicted RBP23.37■■□□□ 1.33
PBX3-202ENST00000373482 ST5P78524 1137 aa23.37■■□□□ 1.33
PBX3-202ENST00000373482 LAMB2P55268 1798 aa23.37■■□□□ 1.33
PBX3-202ENST00000373482 UBN2Q6ZU65 1347 aa23.36■■□□□ 1.33
PBX3-202ENST00000373482 NEXNQ0ZGT2 675 aa23.36■■□□□ 1.33
PBX3-202ENST00000373482 SYT17Q9BSW7 474 aa23.36■■□□□ 1.33
PBX3-202ENST00000373482 METTL22Q9BUU2 404 aaPredicted RBP23.36■■□□□ 1.33
PBX3-202ENST00000373482 BCL2L13Q9BXK5 485 aa23.36■■□□□ 1.33
PBX3-202ENST00000373482 ADCY9O60503 1353 aa23.36■■□□□ 1.33
PBX3-202ENST00000373482 IBTKQ9P2D0 1353 aaPredicted RBP23.36■■□□□ 1.33
PBX3-202ENST00000373482 RARSP54136 660 aaKnown RBP23.35■■□□□ 1.33
PBX3-202ENST00000373482 PRR5LQ6MZQ0 368 aa23.35■■□□□ 1.33
PBX3-202ENST00000373482 MYD88Q99836 296 aa23.35■■□□□ 1.33
PBX3-202ENST00000373482 DDX60Q8IY21 1712 aaKnown RBP23.34■■□□□ 1.33
PBX3-202ENST00000373482 PTPRCP08575 1304 aa23.33■■□□□ 1.33
PBX3-202ENST00000373482 SRCAPQ6ZRS2 3230 aa23.33■■□□□ 1.33
PBX3-202ENST00000373482 ATP5J2-PTCD1G3V325 749 aa23.33■■□□□ 1.33
PBX3-202ENST00000373482 SUSD4Q5VX71 490 aa23.33■■□□□ 1.33
PBX3-202ENST00000373482 NLRP10Q86W26 655 aa23.33■■□□□ 1.33
PBX3-202ENST00000373482 DNAAF4Q8WXU2 420 aa23.33■■□□□ 1.33
PBX3-202ENST00000373482 ISCA1Q9BUE6 129 aa23.33■■□□□ 1.33
PBX3-202ENST00000373482 COL11A2P13942 1736 aaPredicted RBP23.33■■□□□ 1.32
PBX3-202ENST00000373482 TGFB2P61812 414 aa23.32■■□□□ 1.32
PBX3-202ENST00000373482 UTP14AQ9BVJ6 771 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms