RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 FAM184AQ8NB25 1140 aa11.7□□□□□ -0.54
CSMD2-203ENST00000373377 C16orf45Q96MC5 204 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-203ENST00000373377 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
CSMD2-203ENST00000373377 LIMCH1Q9UPQ0 1083 aa11.7□□□□□ -0.54
CSMD2-203ENST00000373377 TBX22Q9Y458 520 aa11.7□□□□□ -0.54
CSMD2-203ENST00000373377 LTN1O94822 1766 aa11.7□□□□□ -0.54
CSMD2-203ENST00000373377 AP5Z1O43299 807 aa11.69□□□□□ -0.54
CSMD2-203ENST00000373377 PTGS1P23219 599 aa11.69□□□□□ -0.54
CSMD2-203ENST00000373377 U2AF2P26368 475 aaKnown RBP eCLIP11.69□□□□□ -0.54
CSMD2-203ENST00000373377 ATP2B3Q16720 1220 aa11.69□□□□□ -0.54
CSMD2-203ENST00000373377 ADCK5Q3MIX3 580 aa11.69□□□□□ -0.54
CSMD2-203ENST00000373377 HDGFL1Q5TGJ6 251 aa11.69□□□□□ -0.54
CSMD2-203ENST00000373377 N4BP2Q86UW6 1770 aaPredicted RBP11.69□□□□□ -0.54
CSMD2-203ENST00000373377 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.69□□□□□ -0.54
CSMD2-203ENST00000373377 KIF24Q5T7B8 1368 aa11.69□□□□□ -0.54
CSMD2-203ENST00000373377 PPFIA3O75145 1194 aa11.69□□□□□ -0.54
CSMD2-203ENST00000373377 HSPA4P34932 840 aa11.69□□□□□ -0.54
CSMD2-203ENST00000373377 ANAPC15P60006 121 aa11.69□□□□□ -0.54
CSMD2-203ENST00000373377 HMGN5P82970 282 aaKnown RBP11.69□□□□□ -0.54
CSMD2-203ENST00000373377 CEBPZQ03701 1054 aaKnown RBP11.69□□□□□ -0.54
CSMD2-203ENST00000373377 USP44Q9H0E7 712 aa11.69□□□□□ -0.54
CSMD2-203ENST00000373377 CCDC9Q9Y3X0 531 aaKnown RBP11.69□□□□□ -0.54
CSMD2-203ENST00000373377 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
CSMD2-203ENST00000373377 NBPF7P0C2Y1 421 aaPredicted RBP11.69□□□□□ -0.54
CSMD2-203ENST00000373377 PDCL2Q8N4E4 241 aa11.69□□□□□ -0.54
CSMD2-203ENST00000373377 NGDNQ8NEJ9 315 aaKnown RBP11.69□□□□□ -0.54
CSMD2-203ENST00000373377 RHPN1Q8TCX5 695 aa11.69□□□□□ -0.54
CSMD2-203ENST00000373377 TTC21BQ7Z4L5 1316 aa11.68□□□□□ -0.54
CSMD2-203ENST00000373377 LRMPQ12912 555 aa11.68□□□□□ -0.54
CSMD2-203ENST00000373377 CNTROBQ8N137 903 aa11.68□□□□□ -0.54
CSMD2-203ENST00000373377 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
CSMD2-203ENST00000373377 RPAP1Q9BWH6 1393 aaPredicted RBP11.68□□□□□ -0.54
CSMD2-203ENST00000373377 PTH1RQ03431 593 aa11.67□□□□□ -0.54
CSMD2-203ENST00000373377 LARP1BQ659C4 914 aaKnown RBP11.67□□□□□ -0.54
CSMD2-203ENST00000373377 SLC26A8Q96RN1 970 aa11.67□□□□□ -0.54
CSMD2-203ENST00000373377 EYA1Q99502 592 aa11.67□□□□□ -0.54
CSMD2-203ENST00000373377 TRIM5Q9C035 493 aa11.67□□□□□ -0.54
CSMD2-203ENST00000373377 ATP6V1DQ9Y5K8 247 aa11.67□□□□□ -0.54
CSMD2-203ENST00000373377 SOS1Q07889 1333 aaPredicted RBP11.67□□□□□ -0.54
CSMD2-203ENST00000373377 SGSM2O43147 1006 aa11.67□□□□□ -0.54
CSMD2-203ENST00000373377 TAF7Q15545 349 aaPredicted RBP11.67□□□□□ -0.54
CSMD2-203ENST00000373377 SMAP1Q8IYB5 467 aaPredicted RBP11.67□□□□□ -0.54
CSMD2-203ENST00000373377 PRIMPOLQ96LW4 560 aa11.67□□□□□ -0.54
CSMD2-203ENST00000373377 PA2G4Q9UQ80 394 aaKnown RBP11.67□□□□□ -0.54
CSMD2-203ENST00000373377 TRPM3Q9HCF6 1732 aaPredicted RBP11.67□□□□□ -0.54
CSMD2-203ENST00000373377 CAMTA1Q9Y6Y1 1673 aa11.66□□□□□ -0.54
CSMD2-203ENST00000373377 NAA30Q147X3 362 aaPredicted RBP11.66□□□□□ -0.54
CSMD2-203ENST00000373377 CCDC186Q7Z3E2 898 aa11.66□□□□□ -0.54
CSMD2-203ENST00000373377 KCNF1Q9H3M0 494 aa11.66□□□□□ -0.54
CSMD2-203ENST00000373377 NRBP1Q9UHY1 535 aa11.66□□□□□ -0.54
CSMD2-203ENST00000373377 NPHP1O15259 732 aa11.66□□□□□ -0.54
CSMD2-203ENST00000373377 CCDC192P0DO97 292 aa11.66□□□□□ -0.54
CSMD2-203ENST00000373377 UVSSAQ2YD98 709 aa11.66□□□□□ -0.54
CSMD2-203ENST00000373377 LIG1P18858 919 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 COL9A3Q14050 684 aaPredicted RBP11.65□□□□□ -0.54
CSMD2-203ENST00000373377 SIL1Q9H173 461 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 NAP1L2Q9ULW6 460 aaPredicted RBP11.65□□□□□ -0.54
CSMD2-203ENST00000373377 KIAA0232Q92628 1395 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 RAD50Q92878 1312 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 SALL3Q9BXA9 1300 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 NFAT5O94916 1531 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 BICD2Q8TD16 824 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.65□□□□□ -0.54
CSMD2-203ENST00000373377 V9GYY5 206 aaPredicted RBP11.65□□□□□ -0.54
CSMD2-203ENST00000373377 FAM208AQ9UK61 1670 aaKnown RBP11.65□□□□□ -0.54
CSMD2-203ENST00000373377 PI4KAP2A4QPH2 592 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 GOLGA6L6A8MZA4 724 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 NLRP6P59044 892 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 PI4KAP1Q8N8J0 262 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 DDX11Q96FC9 970 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 CYP46A1Q9Y6A2 500 aa11.65□□□□□ -0.54
CSMD2-203ENST00000373377 A0A087WWV3 80 aa11.64□□□□□ -0.55
CSMD2-203ENST00000373377 IFIT2P09913 472 aaKnown RBP11.64□□□□□ -0.55
CSMD2-203ENST00000373377 CDC37L1Q7L3B6 337 aa11.64□□□□□ -0.55
CSMD2-203ENST00000373377 LSG1Q9H089 658 aaKnown RBP11.64□□□□□ -0.55
CSMD2-203ENST00000373377 NUP62CLQ9H1M0 184 aa11.64□□□□□ -0.55
CSMD2-203ENST00000373377 TNMDQ9H2S6 317 aa11.64□□□□□ -0.55
CSMD2-203ENST00000373377 DACT1Q9NYF0 836 aa11.64□□□□□ -0.55
CSMD2-203ENST00000373377 MTMR6Q9Y217 621 aa11.64□□□□□ -0.55
CSMD2-203ENST00000373377 GNAT3A8MTJ3 354 aa11.64□□□□□ -0.55
CSMD2-203ENST00000373377 RAB11FIP3O75154 756 aa11.64□□□□□ -0.55
CSMD2-203ENST00000373377 LETM1O95202 739 aaPredicted RBP11.64□□□□□ -0.55
CSMD2-203ENST00000373377 ME3Q16798 604 aa11.64□□□□□ -0.55
CSMD2-203ENST00000373377 ANO6Q4KMQ2 910 aa11.64□□□□□ -0.55
CSMD2-203ENST00000373377 PI4K2BQ8TCG2 481 aa11.64□□□□□ -0.55
CSMD2-203ENST00000373377 CCDC8Q9H0W5 538 aaPredicted RBP11.64□□□□□ -0.55
CSMD2-203ENST00000373377 C9orf78Q9NZ63 289 aaPredicted RBP11.64□□□□□ -0.55
CSMD2-203ENST00000373377 AMOTL2Q9Y2J4 779 aa11.64□□□□□ -0.55
CSMD2-203ENST00000373377 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
CSMD2-203ENST00000373377 MAP3K11Q16584 847 aa11.63□□□□□ -0.55
CSMD2-203ENST00000373377 TTC6Q86TZ1 520 aa11.63□□□□□ -0.55
CSMD2-203ENST00000373377 KIAA1524Q8TCG1 905 aa11.63□□□□□ -0.55
CSMD2-203ENST00000373377 KIF1BPQ96EK5 621 aa11.63□□□□□ -0.55
CSMD2-203ENST00000373377 FAM227BQ96M60 508 aa11.63□□□□□ -0.55
CSMD2-203ENST00000373377 HYPKQ9NX55 129 aa11.63□□□□□ -0.55
CSMD2-203ENST00000373377 ZSCAN20P17040 1043 aaPredicted RBP11.63□□□□□ -0.55
CSMD2-203ENST00000373377 AIMP1Q12904 312 aaKnown RBP11.63□□□□□ -0.55
CSMD2-203ENST00000373377 CLASRPQ8N2M8 674 aaKnown RBP11.63□□□□□ -0.55
CSMD2-203ENST00000373377 CHPF2Q9P2E5 772 aa11.63□□□□□ -0.55
CSMD2-203ENST00000373377 STAP2Q9UGK3 403 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms