RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 CCDC171Q6TFL3 1326 aa13.06□□□□□ -0.32
LCN2-202ENST00000372998 NFAT5O94916 1531 aa13.05□□□□□ -0.32
LCN2-202ENST00000372998 GOLGA6L6A8MZA4 724 aa13.05□□□□□ -0.32
LCN2-202ENST00000372998 IFIT2P09913 472 aaKnown RBP13.05□□□□□ -0.32
LCN2-202ENST00000372998 SASS6Q6UVJ0 657 aa13.05□□□□□ -0.32
LCN2-202ENST00000372998 PALD1Q9ULE6 856 aa13.05□□□□□ -0.32
LCN2-202ENST00000372998 PHF8Q9UPP1 1060 aa13.05□□□□□ -0.32
LCN2-202ENST00000372998 RPAP1Q9BWH6 1393 aaPredicted RBP13.05□□□□□ -0.32
LCN2-202ENST00000372998 F13A1P00488 732 aa13.04□□□□□ -0.32
LCN2-202ENST00000372998 KSR2Q6VAB6 950 aa13.04□□□□□ -0.32
LCN2-202ENST00000372998 USP48Q86UV5 1035 aa13.04□□□□□ -0.32
LCN2-202ENST00000372998 C9orf78Q9NZ63 289 aaPredicted RBP13.04□□□□□ -0.32
LCN2-202ENST00000372998 HMG20BQ9P0W2 317 aa13.04□□□□□ -0.32
LCN2-202ENST00000372998 RBM27Q9P2N5 1060 aaKnown RBP13.04□□□□□ -0.32
LCN2-202ENST00000372998 CAMTA1Q9Y6Y1 1673 aa13.04□□□□□ -0.32
LCN2-202ENST00000372998 RFX7Q2KHR2 1363 aa13.04□□□□□ -0.32
LCN2-202ENST00000372998 BTBD11A6QL63 1104 aa13.03□□□□□ -0.32
LCN2-202ENST00000372998 KRT32Q14532 448 aa13.03□□□□□ -0.32
LCN2-202ENST00000372998 NUTM1Q86Y26 1132 aa13.03□□□□□ -0.32
LCN2-202ENST00000372998 PRIMPOLQ96LW4 560 aa13.03□□□□□ -0.32
LCN2-202ENST00000372998 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
LCN2-202ENST00000372998 SNRKQ9NRH2 765 aa13.03□□□□□ -0.32
LCN2-202ENST00000372998 PDRG1Q9NUG6 133 aa13.03□□□□□ -0.32
LCN2-202ENST00000372998 UTYO14607 1347 aa13.03□□□□□ -0.32
LCN2-202ENST00000372998 AK2P54819 239 aa13.02□□□□□ -0.33
LCN2-202ENST00000372998 G3BP1Q13283 466 aaKnown RBP eCLIP13.02□□□□□ -0.33
LCN2-202ENST00000372998 LINS1Q8NG48 757 aa13.02□□□□□ -0.33
LCN2-202ENST00000372998 UPF3BQ9BZI7 483 aaKnown RBP13.02□□□□□ -0.33
LCN2-202ENST00000372998 IL1RAPL2Q9NP60 686 aa13.02□□□□□ -0.33
LCN2-202ENST00000372998 ABCC6O95255 1503 aa13.02□□□□□ -0.33
LCN2-202ENST00000372998 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.33
LCN2-202ENST00000372998 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.33
LCN2-202ENST00000372998 PI4KAP2A4QPH2 592 aa13.01□□□□□ -0.33
LCN2-202ENST00000372998 CAVIN2O95810 425 aa13.01□□□□□ -0.33
LCN2-202ENST00000372998 RUFY3Q7L099 469 aa13.01□□□□□ -0.33
LCN2-202ENST00000372998 PI4KAP1Q8N8J0 262 aa13.01□□□□□ -0.33
LCN2-202ENST00000372998 USP25Q9UHP3 1055 aa13.01□□□□□ -0.33
LCN2-202ENST00000372998 ELP1O95163 1332 aa13.01□□□□□ -0.33
LCN2-202ENST00000372998 SLIT3O75094 1523 aa13.01□□□□□ -0.33
LCN2-202ENST00000372998 TCHHQ07283 1943 aa13□□□□□ -0.33
LCN2-202ENST00000372998 ZNF142P52746 1687 aaPredicted RBP13□□□□□ -0.33
LCN2-202ENST00000372998 KIF1AQ12756 1690 aa13□□□□□ -0.33
LCN2-202ENST00000372998 EIF2S2P20042 333 aaKnown RBP13□□□□□ -0.33
LCN2-202ENST00000372998 SYT1P21579 422 aa13□□□□□ -0.33
LCN2-202ENST00000372998 KRT85P78386 507 aa13□□□□□ -0.33
LCN2-202ENST00000372998 ZNF530Q6P9A1 599 aaPredicted RBP13□□□□□ -0.33
LCN2-202ENST00000372998 UNC5CLQ8IV45 518 aa13□□□□□ -0.33
LCN2-202ENST00000372998 PHAXQ9H814 394 aaKnown RBP13□□□□□ -0.33
LCN2-202ENST00000372998 CHPF2Q9P2E5 772 aa13□□□□□ -0.33
LCN2-202ENST00000372998 ADCY9O60503 1353 aa12.99□□□□□ -0.33
LCN2-202ENST00000372998 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
LCN2-202ENST00000372998 RNMTO43148 476 aaKnown RBP12.99□□□□□ -0.33
LCN2-202ENST00000372998 CCDC192P0DO97 292 aa12.99□□□□□ -0.33
LCN2-202ENST00000372998 CASTP20810 708 aaKnown RBP12.99□□□□□ -0.33
LCN2-202ENST00000372998 KCNJ4P48050 445 aa12.99□□□□□ -0.33
LCN2-202ENST00000372998 PSME1Q06323 249 aa12.99□□□□□ -0.33
LCN2-202ENST00000372998 NEXNQ0ZGT2 675 aa12.99□□□□□ -0.33
LCN2-202ENST00000372998 TSHZ3Q63HK5 1081 aa12.99□□□□□ -0.33
LCN2-202ENST00000372998 LARP1Q6PKG0 1096 aaKnown RBP12.99□□□□□ -0.33
LCN2-202ENST00000372998 NECTIN2Q92692 538 aa12.99□□□□□ -0.33
LCN2-202ENST00000372998 SCAND2PQ9GZW5 306 aaPredicted RBP12.99□□□□□ -0.33
LCN2-202ENST00000372998 KIF3AQ9Y496 699 aa12.99□□□□□ -0.33
LCN2-202ENST00000372998 COL15A1P39059 1388 aa12.98□□□□□ -0.33
LCN2-202ENST00000372998 GRM8O00222 908 aa12.98□□□□□ -0.33
LCN2-202ENST00000372998 TSGA10IPQ3SY00 556 aa12.98□□□□□ -0.33
LCN2-202ENST00000372998 FOXD4L5Q5VV16 416 aaPredicted RBP12.98□□□□□ -0.33
LCN2-202ENST00000372998 CWC27Q6UX04 472 aaKnown RBP12.98□□□□□ -0.33
LCN2-202ENST00000372998 C14orf37Q86TY3 774 aa12.98□□□□□ -0.33
LCN2-202ENST00000372998 FOXD4L4Q8WXT5 416 aaPredicted RBP12.98□□□□□ -0.33
LCN2-202ENST00000372998 PIBF1Q8WXW3 757 aa12.98□□□□□ -0.33
LCN2-202ENST00000372998 LTV1Q96GA3 475 aaPredicted RBP12.98□□□□□ -0.33
LCN2-202ENST00000372998 JAKMIP1Q96N16 626 aaKnown RBP12.98□□□□□ -0.33
LCN2-202ENST00000372998 DDX21Q9NR30 783 aaKnown RBP eCLIP12.98□□□□□ -0.33
LCN2-202ENST00000372998 R3HCC1Q9Y3T6 440 aaKnown RBP12.98□□□□□ -0.33
LCN2-202ENST00000372998 MRC1P22897 1456 aa12.97□□□□□ -0.33
LCN2-202ENST00000372998 KDM4AO75164 1064 aa12.97□□□□□ -0.33
LCN2-202ENST00000372998 NBPF7P0C2Y1 421 aaPredicted RBP12.97□□□□□ -0.33
LCN2-202ENST00000372998 KCNA6P17658 529 aa12.97□□□□□ -0.33
LCN2-202ENST00000372998 GJB2P29033 226 aa12.97□□□□□ -0.33
LCN2-202ENST00000372998 NECTIN1Q15223 517 aa12.97□□□□□ -0.33
LCN2-202ENST00000372998 NOL8Q76FK4 1167 aaKnown RBP12.97□□□□□ -0.33
LCN2-202ENST00000372998 ANKLE2Q86XL3 938 aa12.97□□□□□ -0.33
LCN2-202ENST00000372998 MAP4K1Q92918 833 aa12.97□□□□□ -0.33
LCN2-202ENST00000372998 MST1RQ04912 1400 aa12.96□□□□□ -0.33
LCN2-202ENST00000372998 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.33
LCN2-202ENST00000372998 CHAF1AQ13111 956 aaPredicted RBP12.96□□□□□ -0.33
LCN2-202ENST00000372998 BLOC1S2Q6QNY1 142 aa12.96□□□□□ -0.33
LCN2-202ENST00000372998 DDX19AQ9NUU7 478 aaKnown RBP12.96□□□□□ -0.33
LCN2-202ENST00000372998 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.96□□□□□ -0.33
LCN2-202ENST00000372998 NSFL1CQ9UNZ2 370 aaKnown RBP12.96□□□□□ -0.33
LCN2-202ENST00000372998 MTMR6Q9Y217 621 aa12.96□□□□□ -0.33
LCN2-202ENST00000372998 MAP3K2Q9Y2U5 619 aa12.96□□□□□ -0.33
LCN2-202ENST00000372998 UQCRHLA0A096LP55 91 aa12.95□□□□□ -0.34
LCN2-202ENST00000372998 GOLGA6L4A6NEF3 574 aa12.95□□□□□ -0.34
LCN2-202ENST00000372998 UQCRHP07919 91 aa12.95□□□□□ -0.34
LCN2-202ENST00000372998 HMGB1P09429 215 aaKnown RBP12.95□□□□□ -0.34
LCN2-202ENST00000372998 NBPF6Q5VWK0 638 aa12.95□□□□□ -0.34
LCN2-202ENST00000372998 CREB3L3Q68CJ9 461 aa12.95□□□□□ -0.34
LCN2-202ENST00000372998 ATL3Q6DD88 541 aa12.95□□□□□ -0.34
LCN2-202ENST00000372998 AACSQ86V21 672 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms