RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 DDR1Q08345 913 aa12.3□□□□□ -0.44
TMEM254-201ENST00000372273 COPS6Q7L5N1 327 aa12.3□□□□□ -0.44
TMEM254-201ENST00000372273 XAGE3Q8WTP9 111 aa12.3□□□□□ -0.44
TMEM254-201ENST00000372273 FAM177BA6PVY3 158 aa12.29□□□□□ -0.44
TMEM254-201ENST00000372273 VAMP4O75379 141 aa12.29□□□□□ -0.44
TMEM254-201ENST00000372273 SLFN5Q08AF3 891 aa12.29□□□□□ -0.44
TMEM254-201ENST00000372273 NFIXQ14938 502 aa12.29□□□□□ -0.44
TMEM254-201ENST00000372273 NCBP3Q53F19 620 aaKnown RBP12.29□□□□□ -0.44
TMEM254-201ENST00000372273 NLGN1Q8N2Q7 840 aa12.28□□□□□ -0.44
TMEM254-201ENST00000372273 MYH16Q9H6N6 1097 aa12.28□□□□□ -0.44
TMEM254-201ENST00000372273 HMGB2P26583 209 aaKnown RBP12.28□□□□□ -0.44
TMEM254-201ENST00000372273 POLD1P28340 1107 aa12.28□□□□□ -0.44
TMEM254-201ENST00000372273 G2E3Q7L622 706 aa12.28□□□□□ -0.44
TMEM254-201ENST00000372273 RNF123Q5XPI4 1314 aa12.27□□□□□ -0.44
TMEM254-201ENST00000372273 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
TMEM254-201ENST00000372273 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
TMEM254-201ENST00000372273 BCL2L13Q9BXK5 485 aa12.27□□□□□ -0.45
TMEM254-201ENST00000372273 DDX21Q9NR30 783 aaKnown RBP eCLIP12.27□□□□□ -0.45
TMEM254-201ENST00000372273 DBF4Q9UBU7 674 aaPredicted RBP12.27□□□□□ -0.45
TMEM254-201ENST00000372273 CICQ96RK0 1608 aaPredicted RBP12.27□□□□□ -0.45
TMEM254-201ENST00000372273 E9PSI1 815 aa12.26□□□□□ -0.45
TMEM254-201ENST00000372273 GPTP24298 496 aa12.26□□□□□ -0.45
TMEM254-201ENST00000372273 TM4SF1P30408 202 aa12.26□□□□□ -0.45
TMEM254-201ENST00000372273 POLRMTO00411 1230 aaKnown RBP12.26□□□□□ -0.45
TMEM254-201ENST00000372273 HOXB7P09629 217 aa12.26□□□□□ -0.45
TMEM254-201ENST00000372273 SYT17Q9BSW7 474 aa12.26□□□□□ -0.45
TMEM254-201ENST00000372273 C4AP0C0L4 1744 aa12.25□□□□□ -0.45
TMEM254-201ENST00000372273 A0A087WZG4 1122 aa12.25□□□□□ -0.45
TMEM254-201ENST00000372273 CCDC30Q5VVM6 783 aa12.25□□□□□ -0.45
TMEM254-201ENST00000372273 TRMT2AQ8IZ69 625 aaKnown RBP12.25□□□□□ -0.45
TMEM254-201ENST00000372273 NIP7Q9Y221 180 aaKnown RBP eCLIP12.25□□□□□ -0.45
TMEM254-201ENST00000372273 MAP3K15Q6ZN16 1313 aa12.25□□□□□ -0.45
TMEM254-201ENST00000372273 B4GALNT3Q6L9W6 998 aa12.24□□□□□ -0.45
TMEM254-201ENST00000372273 KIF6Q6ZMV9 814 aa12.24□□□□□ -0.45
TMEM254-201ENST00000372273 PARP3Q9Y6F1 533 aa12.24□□□□□ -0.45
TMEM254-201ENST00000372273 ATP5J2-PTCD1G3V325 749 aa12.23□□□□□ -0.45
TMEM254-201ENST00000372273 SERPINB2P05120 415 aa12.23□□□□□ -0.45
TMEM254-201ENST00000372273 SYNE4Q8N205 404 aa12.23□□□□□ -0.45
TMEM254-201ENST00000372273 SETDB2Q96T68 719 aa12.23□□□□□ -0.45
TMEM254-201ENST00000372273 RBM19Q9Y4C8 960 aaKnown RBP12.23□□□□□ -0.45
TMEM254-201ENST00000372273 UBN2Q6ZU65 1347 aa12.23□□□□□ -0.45
TMEM254-201ENST00000372273 RTL5Q5HYW3 569 aaPredicted RBP12.23□□□□□ -0.45
TMEM254-201ENST00000372273 ANKRD13DQ6ZTN6 518 aa12.23□□□□□ -0.45
TMEM254-201ENST00000372273 NUTM1Q86Y26 1132 aa12.23□□□□□ -0.45
TMEM254-201ENST00000372273 A0A0G2JLW4 131 aa12.22□□□□□ -0.45
TMEM254-201ENST00000372273 ERBB4Q15303 1308 aa12.22□□□□□ -0.45
TMEM254-201ENST00000372273 CARMIL3Q8ND23 1372 aa12.22□□□□□ -0.45
TMEM254-201ENST00000372273 STK31Q9BXU1 1019 aa12.22□□□□□ -0.45
TMEM254-201ENST00000372273 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
TMEM254-201ENST00000372273 QSER1Q2KHR3 1735 aa12.22□□□□□ -0.45
TMEM254-201ENST00000372273 PI4KAP2A4QPH2 592 aa12.22□□□□□ -0.45
TMEM254-201ENST00000372273 GIGYF2Q6Y7W6 1299 aaKnown RBP12.22□□□□□ -0.45
TMEM254-201ENST00000372273 PI4KAP1Q8N8J0 262 aa12.22□□□□□ -0.45
TMEM254-201ENST00000372273 RCAN3Q9UKA8 241 aa12.22□□□□□ -0.45
TMEM254-201ENST00000372273 F6X3S4 739 aa12.21□□□□□ -0.45
TMEM254-201ENST00000372273 NPHP1O15259 732 aa12.21□□□□□ -0.45
TMEM254-201ENST00000372273 CHRNA5P30532 468 aa12.21□□□□□ -0.45
TMEM254-201ENST00000372273 SUSD4Q5VX71 490 aa12.21□□□□□ -0.45
TMEM254-201ENST00000372273 CLEC4GQ6UXB4 293 aa12.21□□□□□ -0.45
TMEM254-201ENST00000372273 SSH1Q8WYL5 1049 aa12.21□□□□□ -0.45
TMEM254-201ENST00000372273 JARID2Q92833 1246 aaPredicted RBP12.21□□□□□ -0.45
TMEM254-201ENST00000372273 LAMB4A4D0S4 1761 aa12.2□□□□□ -0.46
TMEM254-201ENST00000372273 ERVV-1B6SEH8 477 aa12.2□□□□□ -0.46
TMEM254-201ENST00000372273 RRP1P56182 461 aaKnown RBP12.2□□□□□ -0.46
TMEM254-201ENST00000372273 FLIIQ13045 1269 aa12.2□□□□□ -0.46
TMEM254-201ENST00000372273 PRR5LQ6MZQ0 368 aa12.2□□□□□ -0.46
TMEM254-201ENST00000372273 RIC3Q7Z5B4 369 aa12.2□□□□□ -0.46
TMEM254-201ENST00000372273 NBPF5PQ86XG9 351 aaPredicted RBP12.2□□□□□ -0.46
TMEM254-201ENST00000372273 CCDC136Q96JN2 1154 aa12.2□□□□□ -0.46
TMEM254-201ENST00000372273 FKBP5Q13451 457 aaPredicted RBP12.2□□□□□ -0.46
TMEM254-201ENST00000372273 PLBD2Q8NHP8 589 aa12.2□□□□□ -0.46
TMEM254-201ENST00000372273 ZNF652Q9Y2D9 606 aa12.2□□□□□ -0.46
TMEM254-201ENST00000372273 MAP3K2Q9Y2U5 619 aa12.2□□□□□ -0.46
TMEM254-201ENST00000372273 ZNF34Q8IZ26 560 aa12.19□□□□□ -0.46
TMEM254-201ENST00000372273 CWF19L2Q2TBE0 894 aaKnown RBP12.18□□□□□ -0.46
TMEM254-201ENST00000372273 ERFEQ4G0M1 354 aa12.18□□□□□ -0.46
TMEM254-201ENST00000372273 CNBD1Q8NA66 436 aa12.18□□□□□ -0.46
TMEM254-201ENST00000372273 MYD88Q99836 296 aa12.18□□□□□ -0.46
TMEM254-201ENST00000372273 LRP5O75197 1615 aa12.18□□□□□ -0.46
TMEM254-201ENST00000372273 ADCY9O60503 1353 aa12.18□□□□□ -0.46
TMEM254-201ENST00000372273 BCAR3O75815 825 aa12.18□□□□□ -0.46
TMEM254-201ENST00000372273 DPEP1P16444 411 aa12.18□□□□□ -0.46
TMEM254-201ENST00000372273 TCIRG1Q13488 830 aa12.18□□□□□ -0.46
TMEM254-201ENST00000372273 FAM89AQ96GI7 184 aa12.18□□□□□ -0.46
TMEM254-201ENST00000372273 GTF2E1P29083 439 aaPredicted RBP12.17□□□□□ -0.46
TMEM254-201ENST00000372273 C3orf67Q6ZVT6 689 aa12.17□□□□□ -0.46
TMEM254-201ENST00000372273 NLRP10Q86W26 655 aa12.17□□□□□ -0.46
TMEM254-201ENST00000372273 KCNA3P22001 575 aa12.17□□□□□ -0.46
TMEM254-201ENST00000372273 TPTE2Q6XPS3 522 aa12.17□□□□□ -0.46
TMEM254-201ENST00000372273 SLC51AQ86UW1 340 aa12.17□□□□□ -0.46
TMEM254-201ENST00000372273 MRPL50Q8N5N7 158 aaKnown RBP12.17□□□□□ -0.46
TMEM254-201ENST00000372273 SMC4Q9NTJ3 1288 aa12.17□□□□□ -0.46
TMEM254-201ENST00000372273 CD2APQ9Y5K6 639 aa12.17□□□□□ -0.46
TMEM254-201ENST00000372273 IGKV5-2P06315 115 aa12.16□□□□□ -0.46
TMEM254-201ENST00000372273 HCLS1P14317 486 aaPredicted RBP12.16□□□□□ -0.46
TMEM254-201ENST00000372273 SLC4A10Q6U841 1118 aa12.16□□□□□ -0.46
TMEM254-201ENST00000372273 KSR2Q6VAB6 950 aa12.16□□□□□ -0.46
TMEM254-201ENST00000372273 ABCC12Q96J65 1359 aa12.16□□□□□ -0.46
TMEM254-201ENST00000372273 NTSR2O95665 410 aa12.15□□□□□ -0.46
TMEM254-201ENST00000372273 YBX3P16989 372 aaKnown RBP eCLIP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms