RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 BCL2L12Q9HB09 334 aa20.92■□□□□ 0.94
TMEM53-203ENST00000372242 SMC4Q9NTJ3 1288 aa20.92■□□□□ 0.94
TMEM53-203ENST00000372242 FKBP8Q14318 412 aa20.91■□□□□ 0.94
TMEM53-203ENST00000372242 MRPL50Q8N5N7 158 aaKnown RBP20.91■□□□□ 0.94
TMEM53-203ENST00000372242 HLFQ16534 295 aa20.9■□□□□ 0.94
TMEM53-203ENST00000372242 ALDH1L2Q3SY69 923 aa20.9■□□□□ 0.94
TMEM53-203ENST00000372242 ATF5Q9Y2D1 282 aaPredicted RBP20.9■□□□□ 0.94
TMEM53-203ENST00000372242 MAP3K15Q6ZN16 1313 aa20.9■□□□□ 0.94
TMEM53-203ENST00000372242 FLIIQ13045 1269 aa20.9■□□□□ 0.94
TMEM53-203ENST00000372242 SLC16A10Q8TF71 515 aa20.9■□□□□ 0.94
TMEM53-203ENST00000372242 SCN7AQ01118 1682 aa20.89■□□□□ 0.94
TMEM53-203ENST00000372242 BCORQ6W2J9 1755 aa20.89■□□□□ 0.93
TMEM53-203ENST00000372242 CACNA1FO60840 1977 aa20.89■□□□□ 0.93
TMEM53-203ENST00000372242 ANKRD13DQ6ZTN6 518 aa20.89■□□□□ 0.93
TMEM53-203ENST00000372242 BCAR3O75815 825 aa20.88■□□□□ 0.93
TMEM53-203ENST00000372242 MTFR1LQ9H019 292 aa20.88■□□□□ 0.93
TMEM53-203ENST00000372242 ERVV-1B6SEH8 477 aa20.88■□□□□ 0.93
TMEM53-203ENST00000372242 FKBP5Q13451 457 aaPredicted RBP20.88■□□□□ 0.93
TMEM53-203ENST00000372242 BICDL1Q6ZP65 573 aa20.87■□□□□ 0.93
TMEM53-203ENST00000372242 NLGN1Q8N2Q7 840 aa20.87■□□□□ 0.93
TMEM53-203ENST00000372242 PLBD2Q8NHP8 589 aa20.87■□□□□ 0.93
TMEM53-203ENST00000372242 TBC1D9BQ66K14 1250 aa20.86■□□□□ 0.93
TMEM53-203ENST00000372242 RIC3Q7Z5B4 369 aa20.86■□□□□ 0.93
TMEM53-203ENST00000372242 NUP98P52948 1817 aa20.86■□□□□ 0.93
TMEM53-203ENST00000372242 PI4KAP2A4QPH2 592 aa20.85■□□□□ 0.93
TMEM53-203ENST00000372242 GIGYF2Q6Y7W6 1299 aaKnown RBP20.85■□□□□ 0.93
TMEM53-203ENST00000372242 PI4KAP1Q8N8J0 262 aa20.85■□□□□ 0.93
TMEM53-203ENST00000372242 DDX58O95786 925 aaKnown RBP20.85■□□□□ 0.93
TMEM53-203ENST00000372242 CLEC4GQ6UXB4 293 aa20.85■□□□□ 0.93
TMEM53-203ENST00000372242 ZNF652Q9Y2D9 606 aa20.85■□□□□ 0.93
TMEM53-203ENST00000372242 ADCY9O60503 1353 aa20.85■□□□□ 0.93
TMEM53-203ENST00000372242 ARFGEF2Q9Y6D5 1785 aa20.84■□□□□ 0.93
TMEM53-203ENST00000372242 NFIXQ14938 502 aa20.84■□□□□ 0.93
TMEM53-203ENST00000372242 MAP3K2Q9Y2U5 619 aa20.84■□□□□ 0.93
TMEM53-203ENST00000372242 F6X3S4 739 aa20.83■□□□□ 0.93
TMEM53-203ENST00000372242 MMP10P09238 476 aa20.83■□□□□ 0.93
TMEM53-203ENST00000372242 KSR2Q6VAB6 950 aa20.83■□□□□ 0.93
TMEM53-203ENST00000372242 RCAN3Q9UKA8 241 aa20.83■□□□□ 0.93
TMEM53-203ENST00000372242 NOB1Q9ULX3 412 aaKnown RBP20.83■□□□□ 0.93
TMEM53-203ENST00000372242 GPTP24298 496 aa20.83■□□□□ 0.92
TMEM53-203ENST00000372242 TM4SF1P30408 202 aa20.82■□□□□ 0.92
TMEM53-203ENST00000372242 BRPF1P55201 1214 aaPredicted RBP20.82■□□□□ 0.92
TMEM53-203ENST00000372242 SPON1Q9HCB6 807 aa20.82■□□□□ 0.92
TMEM53-203ENST00000372242 NIP7Q9Y221 180 aaKnown RBP eCLIP20.82■□□□□ 0.92
TMEM53-203ENST00000372242 DDR1Q08345 913 aa20.81■□□□□ 0.92
TMEM53-203ENST00000372242 FRAT1Q92837 279 aaPredicted RBP20.81■□□□□ 0.92
TMEM53-203ENST00000372242 SRCAPQ6ZRS2 3230 aa20.81■□□□□ 0.92
TMEM53-203ENST00000372242 ATP5J2-PTCD1G3V325 749 aa20.81■□□□□ 0.92
TMEM53-203ENST00000372242 RGL2O15211 777 aa20.81■□□□□ 0.92
TMEM53-203ENST00000372242 PTGER2P43116 358 aa20.81■□□□□ 0.92
TMEM53-203ENST00000372242 TCIRG1Q13488 830 aa20.81■□□□□ 0.92
TMEM53-203ENST00000372242 SETDB2Q96T68 719 aa20.81■□□□□ 0.92
TMEM53-203ENST00000372242 SGIP1Q9BQI5 828 aa20.81■□□□□ 0.92
TMEM53-203ENST00000372242 ZNF34Q8IZ26 560 aa20.8■□□□□ 0.92
TMEM53-203ENST00000372242 MYD88Q99836 296 aa20.8■□□□□ 0.92
TMEM53-203ENST00000372242 COL24A1Q17RW2 1714 aa20.79■□□□□ 0.92
TMEM53-203ENST00000372242 PTPRCP08575 1304 aa20.79■□□□□ 0.92
TMEM53-203ENST00000372242 UBN2Q6ZU65 1347 aa20.79■□□□□ 0.92
TMEM53-203ENST00000372242 KIF16BQ96L93 1317 aa20.79■□□□□ 0.92
TMEM53-203ENST00000372242 FAM177BA6PVY3 158 aa20.79■□□□□ 0.92
TMEM53-203ENST00000372242 DNAAF4Q8WXU2 420 aa20.79■□□□□ 0.92
TMEM53-203ENST00000372242 METTL22Q9BUU2 404 aaPredicted RBP20.79■□□□□ 0.92
TMEM53-203ENST00000372242 ATP10DQ9P241 1426 aa20.79■□□□□ 0.92
TMEM53-203ENST00000372242 POLRMTO00411 1230 aaKnown RBP20.78■□□□□ 0.92
TMEM53-203ENST00000372242 POLD1P28340 1107 aa20.78■□□□□ 0.92
TMEM53-203ENST00000372242 ANKRD36CQ5JPF3 1778 aa20.78■□□□□ 0.92
TMEM53-203ENST00000372242 HSP90AB3PQ58FF7 597 aa20.78■□□□□ 0.92
TMEM53-203ENST00000372242 SLC4A10Q6U841 1118 aa20.78■□□□□ 0.92
TMEM53-203ENST00000372242 PARP3Q9Y6F1 533 aa20.78■□□□□ 0.92
TMEM53-203ENST00000372242 CARMIL3Q8ND23 1372 aa20.77■□□□□ 0.92
TMEM53-203ENST00000372242 CWF19L2Q2TBE0 894 aaKnown RBP20.76■□□□□ 0.91
TMEM53-203ENST00000372242 ISCA1Q9BUE6 129 aa20.76■□□□□ 0.91
TMEM53-203ENST00000372242 TNNQ9UQP3 1299 aa20.76■□□□□ 0.91
TMEM53-203ENST00000372242 SERPINB2P05120 415 aa20.76■□□□□ 0.91
TMEM53-203ENST00000372242 IGKV5-2P06315 115 aa20.76■□□□□ 0.91
TMEM53-203ENST00000372242 NEXNQ0ZGT2 675 aa20.76■□□□□ 0.91
TMEM53-203ENST00000372242 SUSD4Q5VX71 490 aa20.76■□□□□ 0.91
TMEM53-203ENST00000372242 NLRP10Q86W26 655 aa20.76■□□□□ 0.91
TMEM53-203ENST00000372242 IPO8O15397 1037 aaKnown RBP20.74■□□□□ 0.91
TMEM53-203ENST00000372242 TRIM27P14373 513 aa20.74■□□□□ 0.91
TMEM53-203ENST00000372242 NBPF5PQ86XG9 351 aaPredicted RBP20.74■□□□□ 0.91
TMEM53-203ENST00000372242 CCDC24Q8N4L8 307 aa20.74■□□□□ 0.91
TMEM53-203ENST00000372242 ARHGAP45Q92619 1136 aa20.74■□□□□ 0.91
TMEM53-203ENST00000372242 AFDNP55196 1824 aaKnown RBP20.74■□□□□ 0.91
TMEM53-203ENST00000372242 PLIN1O60240 522 aa20.74■□□□□ 0.91
TMEM53-203ENST00000372242 ATF7IPQ6VMQ6 1270 aa20.74■□□□□ 0.91
TMEM53-203ENST00000372242 CLUAP1Q96AJ1 413 aa20.74■□□□□ 0.91
TMEM53-203ENST00000372242 API5Q9BZZ5 524 aaKnown RBP20.74■□□□□ 0.91
TMEM53-203ENST00000372242 PARP10Q53GL7 1025 aa20.73■□□□□ 0.91
TMEM53-203ENST00000372242 BEND3Q5T5X7 828 aa20.73■□□□□ 0.91
TMEM53-203ENST00000372242 ZKSCAN2Q63HK3 967 aa20.73■□□□□ 0.91
TMEM53-203ENST00000372242 NPHP1O15259 732 aa20.72■□□□□ 0.91
TMEM53-203ENST00000372242 TRIM28Q13263 835 aaKnown RBP20.72■□□□□ 0.91
TMEM53-203ENST00000372242 NUTM1Q86Y26 1132 aa20.72■□□□□ 0.91
TMEM53-203ENST00000372242 LINS1Q8NG48 757 aa20.72■□□□□ 0.91
TMEM53-203ENST00000372242 NEURL1BA8MQ27 555 aa20.71■□□□□ 0.91
TMEM53-203ENST00000372242 RTL5Q5HYW3 569 aaPredicted RBP20.71■□□□□ 0.91
TMEM53-203ENST00000372242 PRR5LQ6MZQ0 368 aa20.71■□□□□ 0.91
TMEM53-203ENST00000372242 CNBD1Q8NA66 436 aa20.71■□□□□ 0.91
TMEM53-203ENST00000372242 NTSR2O95665 410 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms