RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 NDUFB9Q9Y6M9 179 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 DEPDC5O75140 1603 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 IQGAP1P46940 1657 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 AGLP35573 1532 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 CEBPZQ03701 1054 aaKnown RBP8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 FERMT3Q86UX7 667 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 FBXW7Q969H0 707 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 FAM89AQ96GI7 184 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 GSPT1P15170 499 aaKnown RBP8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 MCM2P49736 904 aa8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 CHMP4CQ96CF2 233 aa8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 ESYT1Q9BSJ8 1104 aa8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 PDRG1Q9NUG6 133 aa8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 ABCF2Q9UG63 623 aa8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 MTMR7Q9Y216 660 aa8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 CCDC83Q8IWF9 413 aa8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 TNPO1Q92973 898 aaKnown RBP8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 SUCLG2Q96I99 432 aa8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 TMX4Q9H1E5 349 aaPredicted RBP8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 MSNP26038 577 aaKnown RBP8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 KIF3AQ9Y496 699 aa8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 TIMM10P62072 90 aa8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 DNAJC10Q8IXB1 793 aa8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 DDX11Q96FC9 970 aa8.53□□□□□ -1.04
TGFBR3-202ENST00000370399 LMTK3Q96Q04 1460 aa8.52□□□□□ -1.05
TGFBR3-202ENST00000370399 BICD2Q8TD16 824 aa8.52□□□□□ -1.05
TGFBR3-202ENST00000370399 GDPD2Q9HCC8 539 aa8.52□□□□□ -1.05
TGFBR3-202ENST00000370399 ATP6V1AP38606 617 aa8.52□□□□□ -1.05
TGFBR3-202ENST00000370399 PRIM1P49642 420 aaKnown RBP8.52□□□□□ -1.05
TGFBR3-202ENST00000370399 HELBQ8NG08 1087 aaPredicted RBP8.52□□□□□ -1.05
TGFBR3-202ENST00000370399 PREX1Q8TCU6 1659 aa8.52□□□□□ -1.05
TGFBR3-202ENST00000370399 BRINP3Q76B58 766 aa8.52□□□□□ -1.05
TGFBR3-202ENST00000370399 EVI5LQ96CN4 794 aa8.52□□□□□ -1.05
TGFBR3-202ENST00000370399 ZNF594Q96JF6 807 aaPredicted RBP8.52□□□□□ -1.05
TGFBR3-202ENST00000370399 BABAM1Q9NWV8 329 aa8.52□□□□□ -1.05
TGFBR3-202ENST00000370399 PCDH11XQ9BZA7 1347 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 PCDH11YQ9BZA8 1340 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 TOM1O60784 492 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 CPA1P15085 419 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 TTLL7Q6ZT98 887 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 IQSEC3Q9UPP2 1182 aaPredicted RBP8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 HOXB7P09629 217 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 CHMLP26374 656 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 TFCP2Q12800 502 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 SYNE3Q6ZMZ3 975 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 CSPP1Q1MSJ5 1256 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 BEND3Q5T5X7 828 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 LARP1BQ659C4 914 aaKnown RBP8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 LRRC7Q96NW7 1537 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 HAND2P61296 217 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 CPLX2Q6PUV4 134 aaKnown RBP8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 EDC3Q96F86 508 aaKnown RBP8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 METTL22Q9BUU2 404 aaPredicted RBP8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 USP26Q9BXU7 913 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 LRRC2Q9BYS8 371 aa8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 CWC22Q9HCG8 908 aaKnown RBP8.51□□□□□ -1.05
TGFBR3-202ENST00000370399 TMEM131LA2VDJ0 1609 aa8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 GCKRQ14397 625 aa8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 ZGPATQ8N5A5 531 aaKnown RBP8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 RAD21O60216 631 aa8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 ATP2B1P20020 1258 aa8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 BRPF1P55201 1214 aaPredicted RBP8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 TMX3Q96JJ7 454 aa8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 TEX13AQ9BXU3 409 aaPredicted RBP8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 LRP2BPQ9P2M1 347 aa8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 ANKRD18BA2A2Z9 1011 aa8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 CYP27B1O15528 508 aa8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 PHF14O94880 888 aa8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 IGHMBP2P38935 993 aaKnown RBP8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 HSP90AB3PQ58FF7 597 aa8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 MPNDQ8N594 471 aa8.5□□□□□ -1.05
TGFBR3-202ENST00000370399 POLR1AO95602 1720 aaPredicted RBP8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 NECAB1Q8N987 351 aa8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 ASAP1Q9ULH1 1129 aa8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 CIZ1Q9ULV3 898 aaPredicted RBP8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 MYO3AQ8NEV4 1616 aa8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 DZIP3Q86Y13 1208 aaKnown RBP8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 CD163L1Q9NR16 1453 aa8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 AKAP17AQ02040 695 aaKnown RBP8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 CHAF1AQ13111 956 aaPredicted RBP8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 RAB11FIP4Q86YS3 637 aa8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 DBNDD2Q9BQY9 259 aa8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 UNC5CLQ8IV45 518 aa8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 AKAP2Q9Y2D5 859 aa8.49□□□□□ -1.05
TGFBR3-202ENST00000370399 NEURL1BA8MQ27 555 aa8.48□□□□□ -1.05
TGFBR3-202ENST00000370399 NMIQ13287 307 aaPredicted RBP8.48□□□□□ -1.05
TGFBR3-202ENST00000370399 RAI14Q9P0K7 980 aa8.48□□□□□ -1.05
TGFBR3-202ENST00000370399 ZPR1O75312 459 aa8.48□□□□□ -1.05
TGFBR3-202ENST00000370399 FAM98CQ17RN3 349 aaKnown RBP8.48□□□□□ -1.05
TGFBR3-202ENST00000370399 PLBD2Q8NHP8 589 aa8.48□□□□□ -1.05
TGFBR3-202ENST00000370399 SSH3Q8TE77 659 aa8.48□□□□□ -1.05
TGFBR3-202ENST00000370399 RBM8AQ9Y5S9 174 aaKnown RBP8.48□□□□□ -1.05
TGFBR3-202ENST00000370399 KIAA1210Q9ULL0 1709 aa8.48□□□□□ -1.05
TGFBR3-202ENST00000370399 ADGRL3Q9HAR2 1447 aa8.48□□□□□ -1.05
TGFBR3-202ENST00000370399 PPLO60437 1756 aa8.48□□□□□ -1.05
TGFBR3-202ENST00000370399 NIP7Q9Y221 180 aaKnown RBP eCLIP8.48□□□□□ -1.05
TGFBR3-202ENST00000370399 WDR33Q9C0J8 1336 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms