RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 ZNF784Q8NCA9 323 aaPredicted RBP18.91■□□□□ 0.62
SSR4-203ENST00000370086 COL11A2P13942 1736 aaPredicted RBP18.91■□□□□ 0.62
SSR4-203ENST00000370086 LRP10Q7Z4F1 713 aa18.9■□□□□ 0.62
SSR4-203ENST00000370086 CFAP44Q96MT7 982 aa18.9■□□□□ 0.62
SSR4-203ENST00000370086 ZNF652Q9Y2D9 606 aa18.9■□□□□ 0.62
SSR4-203ENST00000370086 ERBB4Q15303 1308 aa18.9■□□□□ 0.62
SSR4-203ENST00000370086 SENP3-EIF4A1A0A087X0R7 540 aa18.89■□□□□ 0.61
SSR4-203ENST00000370086 RGL2O15211 777 aa18.89■□□□□ 0.61
SSR4-203ENST00000370086 ZNF853P0CG23 659 aa18.89■□□□□ 0.61
SSR4-203ENST00000370086 CACNA1SQ13698 1873 aa18.88■□□□□ 0.61
SSR4-203ENST00000370086 PROSER3Q2NL68 480 aa18.88■□□□□ 0.61
SSR4-203ENST00000370086 DALRD3Q5D0E6 543 aaKnown RBP18.88■□□□□ 0.61
SSR4-203ENST00000370086 NECTIN2Q92692 538 aa18.88■□□□□ 0.61
SSR4-203ENST00000370086 MBIPQ9NS73 344 aa18.88■□□□□ 0.61
SSR4-203ENST00000370086 MAP3K15Q6ZN16 1313 aa18.88■□□□□ 0.61
SSR4-203ENST00000370086 ERVV-1B6SEH8 477 aa18.87■□□□□ 0.61
SSR4-203ENST00000370086 ANXA1P04083 346 aa18.87■□□□□ 0.61
SSR4-203ENST00000370086 C2CD5Q86YS7 1000 aa18.87■□□□□ 0.61
SSR4-203ENST00000370086 CNBD1Q8NA66 436 aa18.87■□□□□ 0.61
SSR4-203ENST00000370086 BRIP1Q9BX63 1249 aa18.87■□□□□ 0.61
SSR4-203ENST00000370086 NIP7Q9Y221 180 aaKnown RBP eCLIP18.87■□□□□ 0.61
SSR4-203ENST00000370086 KIF6Q6ZMV9 814 aa18.86■□□□□ 0.61
SSR4-203ENST00000370086 ZBTB3Q9H5J0 574 aa18.86■□□□□ 0.61
SSR4-203ENST00000370086 IFT57Q9NWB7 429 aa18.86■□□□□ 0.61
SSR4-203ENST00000370086 H0YIN7 160 aa18.85■□□□□ 0.61
SSR4-203ENST00000370086 ARHGAP27Q6ZUM4 889 aa18.85■□□□□ 0.61
SSR4-203ENST00000370086 NBPF5PQ86XG9 351 aaPredicted RBP18.85■□□□□ 0.61
SSR4-203ENST00000370086 SBF1O95248 1867 aa18.85■□□□□ 0.61
SSR4-203ENST00000370086 ANKRD36CQ5JPF3 1778 aa18.84■□□□□ 0.61
SSR4-203ENST00000370086 FAM177BA6PVY3 158 aa18.84■□□□□ 0.61
SSR4-203ENST00000370086 NPHP1O15259 732 aa18.84■□□□□ 0.61
SSR4-203ENST00000370086 PDE6BP35913 854 aa18.84■□□□□ 0.61
SSR4-203ENST00000370086 GNAI1P63096 354 aa18.84■□□□□ 0.61
SSR4-203ENST00000370086 ST5P78524 1137 aa18.84■□□□□ 0.61
SSR4-203ENST00000370086 CALD1Q05682 793 aaKnown RBP18.84■□□□□ 0.61
SSR4-203ENST00000370086 ATP10DQ9P241 1426 aa18.83■□□□□ 0.61
SSR4-203ENST00000370086 ADCY9O60503 1353 aa18.83■□□□□ 0.61
SSR4-203ENST00000370086 HOXB7P09629 217 aa18.83■□□□□ 0.6
SSR4-203ENST00000370086 CCDC27Q2M243 656 aa18.83■□□□□ 0.6
SSR4-203ENST00000370086 DUSP27Q5VZP5 1158 aa18.83■□□□□ 0.6
SSR4-203ENST00000370086 DDX21Q9NR30 783 aaKnown RBP eCLIP18.83■□□□□ 0.6
SSR4-203ENST00000370086 ARFGEF2Q9Y6D5 1785 aa18.83■□□□□ 0.6
SSR4-203ENST00000370086 TPTE2Q6XPS3 522 aa18.82■□□□□ 0.6
SSR4-203ENST00000370086 GIGYF2Q6Y7W6 1299 aaKnown RBP18.82■□□□□ 0.6
SSR4-203ENST00000370086 WWC1Q8IX03 1113 aa18.82■□□□□ 0.6
SSR4-203ENST00000370086 TTLL6Q8N841 843 aa18.82■□□□□ 0.6
SSR4-203ENST00000370086 CHPF2Q9P2E5 772 aa18.82■□□□□ 0.6
SSR4-203ENST00000370086 CCDC88AQ3V6T2 1871 aa18.82■□□□□ 0.6
SSR4-203ENST00000370086 SLX4Q8IY92 1834 aa18.81■□□□□ 0.6
SSR4-203ENST00000370086 UBN2Q6ZU65 1347 aa18.81■□□□□ 0.6
SSR4-203ENST00000370086 GPTP24298 496 aa18.81■□□□□ 0.6
SSR4-203ENST00000370086 HDGFL1Q5TGJ6 251 aa18.81■□□□□ 0.6
SSR4-203ENST00000370086 COPS6Q7L5N1 327 aa18.81■□□□□ 0.6
SSR4-203ENST00000370086 XAGE3Q8WTP9 111 aa18.81■□□□□ 0.6
SSR4-203ENST00000370086 ZNF622Q969S3 477 aaKnown RBP eCLIP18.81■□□□□ 0.6
SSR4-203ENST00000370086 PDZRN3Q9UPQ7 1066 aa18.81■□□□□ 0.6
SSR4-203ENST00000370086 TNRC6CQ9HCJ0 1690 aaKnown RBP18.81■□□□□ 0.6
SSR4-203ENST00000370086 AIMP1Q12904 312 aaKnown RBP18.8■□□□□ 0.6
SSR4-203ENST00000370086 ZNF34Q8IZ26 560 aa18.8■□□□□ 0.6
SSR4-203ENST00000370086 ELL2O00472 640 aaPredicted RBP18.79■□□□□ 0.6
SSR4-203ENST00000370086 SRGNP10124 158 aa18.79■□□□□ 0.6
SSR4-203ENST00000370086 SUSD4Q5VX71 490 aa18.79■□□□□ 0.6
SSR4-203ENST00000370086 FAM9BQ8IZU0 186 aa18.79■□□□□ 0.6
SSR4-203ENST00000370086 C8orf58Q8NAV2 365 aa18.79■□□□□ 0.6
SSR4-203ENST00000370086 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
SSR4-203ENST00000370086 NUTM1Q86Y26 1132 aa18.78■□□□□ 0.6
SSR4-203ENST00000370086 DBF4Q9UBU7 674 aaPredicted RBP18.78■□□□□ 0.6
SSR4-203ENST00000370086 SALL2Q9Y467 1007 aaPredicted RBP18.78■□□□□ 0.6
SSR4-203ENST00000370086 ABCC12Q96J65 1359 aa18.78■□□□□ 0.6
SSR4-203ENST00000370086 FER1L6Q2WGJ9 1857 aa18.77■□□□□ 0.6
SSR4-203ENST00000370086 KLRG2A4D1S0 409 aaPredicted RBP18.77■□□□□ 0.6
SSR4-203ENST00000370086 ERFEQ4G0M1 354 aa18.77■□□□□ 0.6
SSR4-203ENST00000370086 STYK1Q6J9G0 422 aa18.77■□□□□ 0.6
SSR4-203ENST00000370086 TSR2Q969E8 191 aaKnown RBP18.77■□□□□ 0.6
SSR4-203ENST00000370086 MASTLQ96GX5 879 aa18.77■□□□□ 0.6
SSR4-203ENST00000370086 NYXQ9GZU5 481 aa18.77■□□□□ 0.6
SSR4-203ENST00000370086 GTF2E1P29083 439 aaPredicted RBP18.76■□□□□ 0.59
SSR4-203ENST00000370086 TSPYL6Q8N831 410 aa18.76■□□□□ 0.59
SSR4-203ENST00000370086 IBTKQ9P2D0 1353 aaPredicted RBP18.76■□□□□ 0.59
SSR4-203ENST00000370086 NTSR2O95665 410 aa18.75■□□□□ 0.59
SSR4-203ENST00000370086 RASSF7Q02833 373 aa18.75■□□□□ 0.59
SSR4-203ENST00000370086 C9orf131Q5VYM1 1079 aa18.75■□□□□ 0.59
SSR4-203ENST00000370086 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
SSR4-203ENST00000370086 IL16Q14005 1332 aa18.74■□□□□ 0.59
SSR4-203ENST00000370086 LAMB2P55268 1798 aa18.74■□□□□ 0.59
SSR4-203ENST00000370086 C21orf2O43822 256 aa18.74■□□□□ 0.59
SSR4-203ENST00000370086 PRELPP51888 382 aa18.74■□□□□ 0.59
SSR4-203ENST00000370086 PARP10Q53GL7 1025 aa18.74■□□□□ 0.59
SSR4-203ENST00000370086 ZNF526Q8TF50 670 aaPredicted RBP18.74■□□□□ 0.59
SSR4-203ENST00000370086 CNKSR1Q969H4 720 aa18.74■□□□□ 0.59
SSR4-203ENST00000370086 HYPKQ9NX55 129 aa18.74■□□□□ 0.59
SSR4-203ENST00000370086 NPR1P16066 1061 aa18.73■□□□□ 0.59
SSR4-203ENST00000370086 TCIRG1Q13488 830 aa18.73■□□□□ 0.59
SSR4-203ENST00000370086 PRPF40BQ6NWY9 871 aaKnown RBP18.73■□□□□ 0.59
SSR4-203ENST00000370086 PPP1R42Q7Z4L9 355 aa18.73■□□□□ 0.59
SSR4-203ENST00000370086 PLBD2Q8NHP8 589 aa18.73■□□□□ 0.59
SSR4-203ENST00000370086 PHAXQ9H814 394 aaKnown RBP18.73■□□□□ 0.59
SSR4-203ENST00000370086 DICER1Q9UPY3 1922 aaKnown RBP18.72■□□□□ 0.59
SSR4-203ENST00000370086 NFKBIEO00221 500 aa18.72■□□□□ 0.59
SSR4-203ENST00000370086 HSP90AB3PQ58FF7 597 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms