RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 HSPA1AP0DMV8 641 aaKnown RBP6.37□□□□□ -1.39
UBE3D-202ENST00000369746 HSPA1BP0DMV9 641 aaKnown RBP6.37□□□□□ -1.39
UBE3D-202ENST00000369746 DRC1Q96MC2 740 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 C4AP0C0L4 1744 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 NRXN2Q9P2S2 1712 aa6.37□□□□□ -1.39
UBE3D-202ENST00000369746 EXOC5O00471 708 aa6.36□□□□□ -1.39
UBE3D-202ENST00000369746 C4BP0C0L5 1744 aa6.36□□□□□ -1.39
UBE3D-202ENST00000369746 SLC20A2Q08357 652 aa6.36□□□□□ -1.39
UBE3D-202ENST00000369746 PRPF38BQ5VTL8 546 aaKnown RBP6.36□□□□□ -1.39
UBE3D-202ENST00000369746 MAMSTRQ6ZN01 415 aa6.36□□□□□ -1.39
UBE3D-202ENST00000369746 TMX4Q9H1E5 349 aaPredicted RBP6.36□□□□□ -1.39
UBE3D-202ENST00000369746 PNNQ9H307 717 aaKnown RBP6.36□□□□□ -1.39
UBE3D-202ENST00000369746 GOLGA6CA6NDK9 693 aa6.36□□□□□ -1.39
UBE3D-202ENST00000369746 GOLGA6BA6NDN3 693 aa6.36□□□□□ -1.39
UBE3D-202ENST00000369746 KIF20AO95235 890 aa6.36□□□□□ -1.39
UBE3D-202ENST00000369746 GOLGA6DP0CG33 693 aa6.36□□□□□ -1.39
UBE3D-202ENST00000369746 ARID4AP29374 1257 aaPredicted RBP6.36□□□□□ -1.39
UBE3D-202ENST00000369746 MARCH10Q8NA82 808 aaPredicted RBP6.36□□□□□ -1.39
UBE3D-202ENST00000369746 GOLGA6AQ9NYA3 693 aa6.36□□□□□ -1.39
UBE3D-202ENST00000369746 TOGARAM1Q9Y4F4 1720 aa6.36□□□□□ -1.39
UBE3D-202ENST00000369746 RTL1A6NKG5 1358 aa6.36□□□□□ -1.39
UBE3D-202ENST00000369746 NBPF20Q3BBV1 942 aa6.35□□□□□ -1.39
UBE3D-202ENST00000369746 L1TD1Q5T7N2 865 aaKnown RBP6.35□□□□□ -1.39
UBE3D-202ENST00000369746 ZNF280DQ6N043 979 aa6.35□□□□□ -1.39
UBE3D-202ENST00000369746 CASC1Q6TDU7 716 aa6.35□□□□□ -1.39
UBE3D-202ENST00000369746 SDR16C5Q8N3Y7 309 aa6.35□□□□□ -1.39
UBE3D-202ENST00000369746 MORC4Q8TE76 937 aa6.35□□□□□ -1.39
UBE3D-202ENST00000369746 HHIPL1Q96JK4 782 aa6.35□□□□□ -1.39
UBE3D-202ENST00000369746 SMARCC1Q92922 1105 aaPredicted RBP6.35□□□□□ -1.39
UBE3D-202ENST00000369746 SPOCK3Q9BQ16 436 aa6.35□□□□□ -1.39
UBE3D-202ENST00000369746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.35□□□□□ -1.39
UBE3D-202ENST00000369746 LTBP3Q9NS15 1303 aa6.35□□□□□ -1.39
UBE3D-202ENST00000369746 GOLGA6L3A6NEY3 463 aa6.34□□□□□ -1.39
UBE3D-202ENST00000369746 SEMA3EO15041 775 aa6.34□□□□□ -1.39
UBE3D-202ENST00000369746 PDE6BP35913 854 aa6.34□□□□□ -1.39
UBE3D-202ENST00000369746 AIDAQ96BJ3 306 aa6.34□□□□□ -1.39
UBE3D-202ENST00000369746 TRIM44Q96DX7 344 aaPredicted RBP6.34□□□□□ -1.39
UBE3D-202ENST00000369746 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.34□□□□□ -1.39
UBE3D-202ENST00000369746 CCDC61Q9Y6R9 512 aa6.34□□□□□ -1.39
UBE3D-202ENST00000369746 DOT1LQ8TEK3 1739 aa6.34□□□□□ -1.39
UBE3D-202ENST00000369746 NCAPD2Q15021 1401 aa6.34□□□□□ -1.39
UBE3D-202ENST00000369746 RBBP6Q7Z6E9 1792 aaKnown RBP6.34□□□□□ -1.39
UBE3D-202ENST00000369746 A6NJR5 290 aa6.34□□□□□ -1.39
UBE3D-202ENST00000369746 MAP2K1Q02750 393 aaPredicted RBP6.34□□□□□ -1.39
UBE3D-202ENST00000369746 TMEM51Q9NW97 253 aa6.34□□□□□ -1.39
UBE3D-202ENST00000369746 TIAM2Q8IVF5 1701 aa6.34□□□□□ -1.4
UBE3D-202ENST00000369746 SCP2P22307 547 aa6.34□□□□□ -1.4
UBE3D-202ENST00000369746 KANK4Q5T7N3 995 aaPredicted RBP6.34□□□□□ -1.4
UBE3D-202ENST00000369746 LARP1Q6PKG0 1096 aaKnown RBP6.34□□□□□ -1.4
UBE3D-202ENST00000369746 REM2Q8IYK8 340 aaPredicted RBP6.34□□□□□ -1.4
UBE3D-202ENST00000369746 SREK1Q8WXA9 508 aaKnown RBP6.34□□□□□ -1.4
UBE3D-202ENST00000369746 MAP2P11137 1827 aaKnown RBP6.33□□□□□ -1.4
UBE3D-202ENST00000369746 ERCC3P19447 782 aa6.33□□□□□ -1.4
UBE3D-202ENST00000369746 SKIV2LQ15477 1246 aaKnown RBP6.33□□□□□ -1.4
UBE3D-202ENST00000369746 ZNF513Q8N8E2 541 aaPredicted RBP6.33□□□□□ -1.4
UBE3D-202ENST00000369746 IVNS1ABPQ9Y6Y0 642 aa6.33□□□□□ -1.4
UBE3D-202ENST00000369746 PRR36Q9H6K5 1346 aa6.33□□□□□ -1.4
UBE3D-202ENST00000369746 SBF1O95248 1867 aa6.33□□□□□ -1.4
UBE3D-202ENST00000369746 GCP02774 474 aa6.33□□□□□ -1.4
UBE3D-202ENST00000369746 CC2D1BQ5T0F9 858 aaKnown RBP6.33□□□□□ -1.4
UBE3D-202ENST00000369746 CLEC4GQ6UXB4 293 aa6.33□□□□□ -1.4
UBE3D-202ENST00000369746 ARHGEF25Q86VW2 580 aa6.33□□□□□ -1.4
UBE3D-202ENST00000369746 ARHGEF1Q92888 912 aaKnown RBP6.33□□□□□ -1.4
UBE3D-202ENST00000369746 CIZ1Q9ULV3 898 aaPredicted RBP6.33□□□□□ -1.4
UBE3D-202ENST00000369746 SBNO2Q9Y2G9 1366 aa6.33□□□□□ -1.4
UBE3D-202ENST00000369746 PITPNM2Q9BZ72 1349 aa6.32□□□□□ -1.4
UBE3D-202ENST00000369746 DDRGK1Q96HY6 314 aa6.32□□□□□ -1.4
UBE3D-202ENST00000369746 DCAF5Q96JK2 942 aa6.32□□□□□ -1.4
UBE3D-202ENST00000369746 ADGRF5Q8IZF2 1346 aa6.32□□□□□ -1.4
UBE3D-202ENST00000369746 ITGAEP38570 1179 aa6.32□□□□□ -1.4
UBE3D-202ENST00000369746 TNNT2P45379 298 aaPredicted RBP6.32□□□□□ -1.4
UBE3D-202ENST00000369746 CEP120Q8N960 986 aa6.32□□□□□ -1.4
UBE3D-202ENST00000369746 TSPAN18Q96SJ8 248 aa6.32□□□□□ -1.4
UBE3D-202ENST00000369746 SPDYE4A6NLX3 237 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 DMTNQ08495 405 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 KCNA1Q09470 495 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 FLIIQ13045 1269 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 ZNF827Q17R98 1081 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 ZKSCAN2Q63HK3 967 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 OTUD6BQ8N6M0 293 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 ABHD8Q96I13 439 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 GTPBP4Q9BZE4 634 aaKnown RBP6.31□□□□□ -1.4
UBE3D-202ENST00000369746 WBP1LQ9NX94 342 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 IGSF1Q8N6C5 1336 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 ANP32CO43423 234 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 ZNF500O60304 480 aaPredicted RBP6.31□□□□□ -1.4
UBE3D-202ENST00000369746 NGDNQ8NEJ9 315 aaKnown RBP6.31□□□□□ -1.4
UBE3D-202ENST00000369746 SPOCK2Q92563 424 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 SERPINA10Q9UK55 444 aa6.31□□□□□ -1.4
UBE3D-202ENST00000369746 COL5A3P25940 1745 aaPredicted RBP6.3□□□□□ -1.4
UBE3D-202ENST00000369746 RASSF10A6NK89 507 aa6.3□□□□□ -1.4
UBE3D-202ENST00000369746 MCCD1P59942 119 aaPredicted RBP6.3□□□□□ -1.4
UBE3D-202ENST00000369746 NOM1Q5C9Z4 860 aaKnown RBP6.3□□□□□ -1.4
UBE3D-202ENST00000369746 RC3H1Q5TC82 1133 aaKnown RBP6.3□□□□□ -1.4
UBE3D-202ENST00000369746 DDX46Q7L014 1031 aaKnown RBP6.3□□□□□ -1.4
UBE3D-202ENST00000369746 CABLES1Q8TDN4 633 aa6.3□□□□□ -1.4
UBE3D-202ENST00000369746 ZBTB12Q9Y330 459 aaPredicted RBP6.3□□□□□ -1.4
UBE3D-202ENST00000369746 CCDC194A0A1B0GVG4 234 aa6.3□□□□□ -1.4
UBE3D-202ENST00000369746 U2SURPO15042 1029 aaKnown RBP6.3□□□□□ -1.4
UBE3D-202ENST00000369746 NGEFQ8N5V2 710 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms