RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 SIRT2Q8IXJ6 389 aa18.41■□□□□ 0.54
PHTF1-202ENST00000369598 PHAXQ9H814 394 aaKnown RBP18.41■□□□□ 0.54
PHTF1-202ENST00000369598 USP25Q9UHP3 1055 aa18.41■□□□□ 0.54
PHTF1-202ENST00000369598 U2AF2P26368 475 aaKnown RBP eCLIP18.4■□□□□ 0.54
PHTF1-202ENST00000369598 ZNF445P59923 1031 aa18.4■□□□□ 0.54
PHTF1-202ENST00000369598 GCC1Q96CN9 775 aa18.4■□□□□ 0.54
PHTF1-202ENST00000369598 KDM3BQ7LBC6 1761 aa18.4■□□□□ 0.54
PHTF1-202ENST00000369598 GIGYF1O75420 1035 aaPredicted RBP18.4■□□□□ 0.54
PHTF1-202ENST00000369598 KIAA2012Q0VF49 1180 aa18.4■□□□□ 0.54
PHTF1-202ENST00000369598 CSPP1Q1MSJ5 1256 aa18.4■□□□□ 0.54
PHTF1-202ENST00000369598 LARP1Q6PKG0 1096 aaKnown RBP18.4■□□□□ 0.54
PHTF1-202ENST00000369598 ZCRB1Q8TBF4 217 aaKnown RBP18.4■□□□□ 0.54
PHTF1-202ENST00000369598 MEIS3Q99687 375 aa18.4■□□□□ 0.54
PHTF1-202ENST00000369598 CARD10Q9BWT7 1032 aa18.4■□□□□ 0.54
PHTF1-202ENST00000369598 CHPF2Q9P2E5 772 aa18.4■□□□□ 0.54
PHTF1-202ENST00000369598 PLEKHG2Q9H7P9 1386 aa18.4■□□□□ 0.54
PHTF1-202ENST00000369598 CACNA1FO60840 1977 aa18.39■□□□□ 0.54
PHTF1-202ENST00000369598 COL5A2P05997 1499 aaPredicted RBP18.39■□□□□ 0.53
PHTF1-202ENST00000369598 SLC39A6Q13433 755 aa18.39■□□□□ 0.53
PHTF1-202ENST00000369598 CCDC39Q9UFE4 941 aa18.39■□□□□ 0.53
PHTF1-202ENST00000369598 ZNF790Q6PG37 636 aa18.39■□□□□ 0.53
PHTF1-202ENST00000369598 PDLIM2Q96JY6 352 aa18.39■□□□□ 0.53
PHTF1-202ENST00000369598 RPAP2Q8IXW5 612 aaPredicted RBP18.38■□□□□ 0.53
PHTF1-202ENST00000369598 KDM6AO15550 1401 aaPredicted RBP18.38■□□□□ 0.53
PHTF1-202ENST00000369598 IL2RBP14784 551 aa18.38■□□□□ 0.53
PHTF1-202ENST00000369598 OTUD7AQ8TE49 926 aaPredicted RBP18.38■□□□□ 0.53
PHTF1-202ENST00000369598 DBF4Q9UBU7 674 aaPredicted RBP18.38■□□□□ 0.53
PHTF1-202ENST00000369598 CABP4P57796 275 aa18.37■□□□□ 0.53
PHTF1-202ENST00000369598 BTG4Q9NY30 223 aa18.37■□□□□ 0.53
PHTF1-202ENST00000369598 GTF2E1P29083 439 aaPredicted RBP18.36■□□□□ 0.53
PHTF1-202ENST00000369598 AEBP2Q6ZN18 517 aaPredicted RBP18.36■□□□□ 0.53
PHTF1-202ENST00000369598 ROBO1Q9Y6N7 1651 aa18.36■□□□□ 0.53
PHTF1-202ENST00000369598 ANKRD44Q8N8A2 993 aa18.36■□□□□ 0.53
PHTF1-202ENST00000369598 ANXA1P04083 346 aa18.36■□□□□ 0.53
PHTF1-202ENST00000369598 PTMSP20962 102 aa18.36■□□□□ 0.53
PHTF1-202ENST00000369598 ZDHHC9Q9Y397 364 aa18.36■□□□□ 0.53
PHTF1-202ENST00000369598 ABCA3Q99758 1704 aa18.35■□□□□ 0.53
PHTF1-202ENST00000369598 PRAMEF22A3QJZ6 481 aa18.35■□□□□ 0.53
PHTF1-202ENST00000369598 TERF1P54274 439 aa18.35■□□□□ 0.53
PHTF1-202ENST00000369598 LRSAM1Q6UWE0 723 aa18.35■□□□□ 0.53
PHTF1-202ENST00000369598 ZNF771Q7L3S4 317 aaPredicted RBP18.35■□□□□ 0.53
PHTF1-202ENST00000369598 TTC5Q8N0Z6 440 aa18.35■□□□□ 0.53
PHTF1-202ENST00000369598 SPC24Q8NBT2 197 aa18.35■□□□□ 0.53
PHTF1-202ENST00000369598 HEG1Q9ULI3 1381 aa18.35■□□□□ 0.53
PHTF1-202ENST00000369598 PCDH11XQ9BZA7 1347 aa18.35■□□□□ 0.53
PHTF1-202ENST00000369598 PCDH11YQ9BZA8 1340 aa18.35■□□□□ 0.53
PHTF1-202ENST00000369598 LTBP4Q8N2S1 1624 aa18.35■□□□□ 0.53
PHTF1-202ENST00000369598 BMP2KLQ5H9B9 411 aa18.35■□□□□ 0.53
PHTF1-202ENST00000369598 CEP85Q6P2H3 762 aa18.35■□□□□ 0.53
PHTF1-202ENST00000369598 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
PHTF1-202ENST00000369598 SMARCA5O60264 1052 aaPredicted RBP18.34■□□□□ 0.53
PHTF1-202ENST00000369598 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
PHTF1-202ENST00000369598 SCN11AQ9UI33 1791 aa18.34■□□□□ 0.53
PHTF1-202ENST00000369598 GNAI3P08754 354 aa18.34■□□□□ 0.53
PHTF1-202ENST00000369598 NUCB2P80303 420 aa18.34■□□□□ 0.53
PHTF1-202ENST00000369598 GNAI2P04899 355 aa18.33■□□□□ 0.53
PHTF1-202ENST00000369598 PI4KAP2A4QPH2 592 aa18.33■□□□□ 0.52
PHTF1-202ENST00000369598 GSPT1P15170 499 aaKnown RBP18.33■□□□□ 0.52
PHTF1-202ENST00000369598 NOLC1Q14978 699 aaKnown RBP eCLIP18.33■□□□□ 0.52
PHTF1-202ENST00000369598 MTERF4Q7Z6M4 381 aaKnown RBP18.33■□□□□ 0.52
PHTF1-202ENST00000369598 PI4KAP1Q8N8J0 262 aa18.33■□□□□ 0.52
PHTF1-202ENST00000369598 DCTPP1Q9H773 170 aa18.33■□□□□ 0.52
PHTF1-202ENST00000369598 SIPA1L3O60292 1781 aaPredicted RBP18.33■□□□□ 0.52
PHTF1-202ENST00000369598 GADD45BO75293 160 aaPredicted RBP18.32■□□□□ 0.52
PHTF1-202ENST00000369598 MYRIPQ8NFW9 859 aa18.32■□□□□ 0.52
PHTF1-202ENST00000369598 TRERF1Q96PN7 1200 aa18.32■□□□□ 0.52
PHTF1-202ENST00000369598 LARP6Q9BRS8 491 aaKnown RBP18.32■□□□□ 0.52
PHTF1-202ENST00000369598 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
PHTF1-202ENST00000369598 PKD1L3Q7Z443 1732 aa18.32■□□□□ 0.52
PHTF1-202ENST00000369598 PIP4K2BP78356 416 aa18.31■□□□□ 0.52
PHTF1-202ENST00000369598 TSHZ3Q63HK5 1081 aa18.31■□□□□ 0.52
PHTF1-202ENST00000369598 ZNF496Q96IT1 587 aaPredicted RBP18.31■□□□□ 0.52
PHTF1-202ENST00000369598 SRCIN1Q9C0H9 1055 aa18.31■□□□□ 0.52
PHTF1-202ENST00000369598 HYPKQ9NX55 129 aa18.31■□□□□ 0.52
PHTF1-202ENST00000369598 KIF3AQ9Y496 699 aa18.31■□□□□ 0.52
PHTF1-202ENST00000369598 HMMRO75330 724 aa18.31■□□□□ 0.52
PHTF1-202ENST00000369598 DNAAF4Q8WXU2 420 aa18.31■□□□□ 0.52
PHTF1-202ENST00000369598 TOM1O60784 492 aa18.31■□□□□ 0.52
PHTF1-202ENST00000369598 CDC45O75419 566 aa18.31■□□□□ 0.52
PHTF1-202ENST00000369598 HS1BP3Q53T59 392 aa18.31■□□□□ 0.52
PHTF1-202ENST00000369598 PDCL2Q8N4E4 241 aa18.31■□□□□ 0.52
PHTF1-202ENST00000369598 PROSER3Q2NL68 480 aa18.3■□□□□ 0.52
PHTF1-202ENST00000369598 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
PHTF1-202ENST00000369598 NAA30Q147X3 362 aaPredicted RBP18.3■□□□□ 0.52
PHTF1-202ENST00000369598 DDX21Q9NR30 783 aaKnown RBP eCLIP18.3■□□□□ 0.52
PHTF1-202ENST00000369598 ATP10DQ9P241 1426 aa18.29■□□□□ 0.52
PHTF1-202ENST00000369598 PARP4Q9UKK3 1724 aaKnown RBP18.29■□□□□ 0.52
PHTF1-202ENST00000369598 SNRPA1P09661 255 aaKnown RBP18.29■□□□□ 0.52
PHTF1-202ENST00000369598 HCLS1P14317 486 aaPredicted RBP18.29■□□□□ 0.52
PHTF1-202ENST00000369598 NEK4P51957 841 aa18.29■□□□□ 0.52
PHTF1-202ENST00000369598 USP44Q9H0E7 712 aa18.29■□□□□ 0.52
PHTF1-202ENST00000369598 TSPY26PQ9H489 355 aa18.29■□□□□ 0.52
PHTF1-202ENST00000369598 CHMP3Q9Y3E7 222 aa18.29■□□□□ 0.52
PHTF1-202ENST00000369598 AHDC1Q5TGY3 1603 aaPredicted RBP18.29■□□□□ 0.52
PHTF1-202ENST00000369598 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
PHTF1-202ENST00000369598 UBTFL1P0CB47 393 aaPredicted RBP18.28■□□□□ 0.52
PHTF1-202ENST00000369598 AIMP1Q12904 312 aaKnown RBP18.28■□□□□ 0.52
PHTF1-202ENST00000369598 NAP1L2Q9ULW6 460 aaPredicted RBP18.28■□□□□ 0.52
PHTF1-202ENST00000369598 NKX1-1Q15270 411 aaPredicted RBP18.28■□□□□ 0.52
PHTF1-202ENST00000369598 PXDNLA1KZ92 1463 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms