RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 CCT6BQ92526 530 aa9.96□□□□□ -0.82
VANGL1-204ENST00000369510 LARSQ9P2J5 1176 aaKnown RBP9.96□□□□□ -0.82
VANGL1-204ENST00000369510 G3BP1Q13283 466 aaKnown RBP eCLIP9.96□□□□□ -0.82
VANGL1-204ENST00000369510 RBBP5Q15291 538 aaKnown RBP9.96□□□□□ -0.82
VANGL1-204ENST00000369510 CCDC122Q5T0U0 273 aa9.96□□□□□ -0.82
VANGL1-204ENST00000369510 BZW2Q9Y6E2 419 aaKnown RBP9.96□□□□□ -0.82
VANGL1-204ENST00000369510 SFPQP23246 707 aaKnown RBP eCLIP9.95□□□□□ -0.82
VANGL1-204ENST00000369510 TMCO5AQ8N6Q1 288 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 HELBQ8NG08 1087 aaPredicted RBP9.95□□□□□ -0.82
VANGL1-204ENST00000369510 SPDYE4A6NLX3 237 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 WDR46O15213 610 aaKnown RBP9.95□□□□□ -0.82
VANGL1-204ENST00000369510 CEP104O60308 925 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 LMAN1P49257 510 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 C9orf78Q9NZ63 289 aaPredicted RBP9.95□□□□□ -0.82
VANGL1-204ENST00000369510 CCDC144AA2RUR9 1427 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 CTAGE15A4D2H0 777 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 BUB1BO60566 1050 aaPredicted RBP9.95□□□□□ -0.82
VANGL1-204ENST00000369510 CCDC178Q5BJE1 867 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 NUTM1Q86Y26 1132 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.95□□□□□ -0.82
VANGL1-204ENST00000369510 TTC5Q8N0Z6 440 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 COG3Q96JB2 828 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 DDX19BQ9UMR2 479 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 LUC7L3O95232 432 aaKnown RBP9.95□□□□□ -0.82
VANGL1-204ENST00000369510 GSDMDP57764 484 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
VANGL1-204ENST00000369510 EBAG9O00559 213 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 PYGLP06737 847 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 MCM5P33992 734 aa9.95□□□□□ -0.82
VANGL1-204ENST00000369510 NUTM2DQ5VT03 806 aaPredicted RBP9.95□□□□□ -0.82
VANGL1-204ENST00000369510 HYPKQ9NX55 129 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 SLMAPQ14BN4 828 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 PTPN14Q15678 1187 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 GNL3LQ9NVN8 582 aaKnown RBP9.94□□□□□ -0.82
VANGL1-204ENST00000369510 EFCAB14O75071 495 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 ZNF131P52739 623 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 KIAA0753Q2KHM9 967 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 ATRIPQ8WXE1 791 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 SYNCQ9H7C4 482 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 TXNDC16Q9P2K2 825 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 CADPSQ9ULU8 1353 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 EVC2Q86UK5 1308 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 AP1ARQ63HQ0 302 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 ZNF287Q9HBT7 754 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 SAMD15Q9P1V8 674 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 ZMYND8Q9ULU4 1186 aaPredicted RBP9.94□□□□□ -0.82
VANGL1-204ENST00000369510 COG6Q9Y2V7 657 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 ARL1P40616 181 aaPredicted RBP9.94□□□□□ -0.82
VANGL1-204ENST00000369510 CUL4BQ13620 913 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 MICALL1Q8N3F8 863 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 TNNT1P13805 278 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 PSMA4P25789 261 aaKnown RBP9.94□□□□□ -0.82
VANGL1-204ENST00000369510 NEDD9Q14511 834 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 NBPF1Q3BBV0 1214 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 OSCARQ8IYS5 282 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 VPS52Q8N1B4 723 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 MROH2BQ7Z745 1585 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 RASSF2P50749 326 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 JPH4Q96JJ6 628 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 FAM8A1Q9UBU6 413 aa9.94□□□□□ -0.82
VANGL1-204ENST00000369510 NFKBIBQ15653 356 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 TNMDQ9H2S6 317 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 EHMT1Q9H9B1 1298 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 SPC24Q8NBT2 197 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 MMRN2Q9H8L6 949 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 A0A1B0GUL7 405 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 EP400NLQ6ZTU2 488 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 SPECC1L-ADORA2AF8WAN1 911 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 NAA25Q14CX7 972 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 NONOQ15233 471 aaKnown RBP eCLIP9.93□□□□□ -0.82
VANGL1-204ENST00000369510 ARHGEF9O43307 516 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 PPFIA1Q13136 1202 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 PRDM2Q13029 1718 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 GIPC1O14908 333 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 MAN1A2O60476 641 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 GIGYF1O75420 1035 aaPredicted RBP9.93□□□□□ -0.82
VANGL1-204ENST00000369510 FNBP4Q8N3X1 1017 aaPredicted RBP9.93□□□□□ -0.82
VANGL1-204ENST00000369510 SELENOOQ9BVL4 669 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 CCDC25Q86WR0 208 aa9.93□□□□□ -0.82
VANGL1-204ENST00000369510 TEFQ10587 303 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 PDE1CQ14123 709 aaPredicted RBP9.92□□□□□ -0.82
VANGL1-204ENST00000369510 HLTFQ14527 1009 aaKnown RBP eCLIP9.92□□□□□ -0.82
VANGL1-204ENST00000369510 PANK3Q9H999 370 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 RIOK3O14730 519 aaKnown RBP9.92□□□□□ -0.82
VANGL1-204ENST00000369510 CETN3O15182 167 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 TBC1D31Q96DN5 1066 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.92□□□□□ -0.82
VANGL1-204ENST00000369510 PAXBP1Q9Y5B6 917 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 CTAGE8P0CG41 777 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 RANBP1P43487 201 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 NOP14P78316 857 aaKnown RBP9.92□□□□□ -0.82
VANGL1-204ENST00000369510 CTAGE4Q8IX94 777 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 CCDC170Q8IYT3 715 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 MPHOSPH6Q99547 160 aaKnown RBP9.92□□□□□ -0.82
VANGL1-204ENST00000369510 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.92□□□□□ -0.82
VANGL1-204ENST00000369510 ZRANB2O95218 330 aaKnown RBP eCLIP9.92□□□□□ -0.82
VANGL1-204ENST00000369510 KRT85P78386 507 aa9.92□□□□□ -0.82
VANGL1-204ENST00000369510 LRRC23Q53EV4 343 aaPredicted RBP9.92□□□□□ -0.82
VANGL1-204ENST00000369510 OTUD6BQ8N6M0 293 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms