RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 COL3A1P02461 1466 aaPredicted RBP18.5■□□□□ 0.55
SEMA6C-202ENST00000368912 ATP5J2-PTCD1G3V325 749 aa18.5■□□□□ 0.55
SEMA6C-202ENST00000368912 C22orf23Q9BZE7 217 aa18.5■□□□□ 0.55
SEMA6C-202ENST00000368912 TOMM22Q9NS69 142 aa18.5■□□□□ 0.55
SEMA6C-202ENST00000368912 CAPN2P17655 700 aa18.49■□□□□ 0.55
SEMA6C-202ENST00000368912 ZNF496Q96IT1 587 aaPredicted RBP18.49■□□□□ 0.55
SEMA6C-202ENST00000368912 TNNT1P13805 278 aa18.49■□□□□ 0.55
SEMA6C-202ENST00000368912 PROSER3Q2NL68 480 aa18.49■□□□□ 0.55
SEMA6C-202ENST00000368912 SMARCA5O60264 1052 aaPredicted RBP18.48■□□□□ 0.55
SEMA6C-202ENST00000368912 OGFRQ9NZT2 677 aa18.48■□□□□ 0.55
SEMA6C-202ENST00000368912 TNS3Q68CZ2 1445 aa18.48■□□□□ 0.55
SEMA6C-202ENST00000368912 GABPB1Q06547 395 aaPredicted RBP18.47■□□□□ 0.55
SEMA6C-202ENST00000368912 RBSNQ9H1K0 784 aa18.47■□□□□ 0.55
SEMA6C-202ENST00000368912 TMOD3Q9NYL9 352 aa18.47■□□□□ 0.55
SEMA6C-202ENST00000368912 RSPH14Q9UHP6 348 aa18.47■□□□□ 0.55
SEMA6C-202ENST00000368912 USP16Q9Y5T5 823 aa18.47■□□□□ 0.55
SEMA6C-202ENST00000368912 PHKG2P15735 406 aa18.47■□□□□ 0.55
SEMA6C-202ENST00000368912 ZBTB3Q9H5J0 574 aa18.47■□□□□ 0.55
SEMA6C-202ENST00000368912 NALCNQ8IZF0 1738 aa18.47■□□□□ 0.55
SEMA6C-202ENST00000368912 PSEN1P49768 467 aa18.46■□□□□ 0.55
SEMA6C-202ENST00000368912 EXOC6BQ9Y2D4 811 aa18.46■□□□□ 0.55
SEMA6C-202ENST00000368912 USP32Q8NFA0 1604 aa18.46■□□□□ 0.55
SEMA6C-202ENST00000368912 ZNF853P0CG23 659 aa18.46■□□□□ 0.55
SEMA6C-202ENST00000368912 ALDH1L2Q3SY69 923 aa18.45■□□□□ 0.54
SEMA6C-202ENST00000368912 C17orf53Q8N3J3 647 aaPredicted RBP18.45■□□□□ 0.54
SEMA6C-202ENST00000368912 CWF19L2Q2TBE0 894 aaKnown RBP18.45■□□□□ 0.54
SEMA6C-202ENST00000368912 FEZ1Q99689 392 aa18.45■□□□□ 0.54
SEMA6C-202ENST00000368912 CNKSR2Q8WXI2 1034 aa18.45■□□□□ 0.54
SEMA6C-202ENST00000368912 A1BGP04217 495 aa18.44■□□□□ 0.54
SEMA6C-202ENST00000368912 MMP14P50281 582 aa18.44■□□□□ 0.54
SEMA6C-202ENST00000368912 PLCB2Q00722 1185 aa18.44■□□□□ 0.54
SEMA6C-202ENST00000368912 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
SEMA6C-202ENST00000368912 PRIM1P49642 420 aaKnown RBP18.44■□□□□ 0.54
SEMA6C-202ENST00000368912 GEMIN8Q9NWZ8 242 aaKnown RBP18.44■□□□□ 0.54
SEMA6C-202ENST00000368912 EIF4A1P60842 406 aaKnown RBP18.44■□□□□ 0.54
SEMA6C-202ENST00000368912 SIL1Q9H173 461 aa18.44■□□□□ 0.54
SEMA6C-202ENST00000368912 TSHZ3Q63HK5 1081 aa18.43■□□□□ 0.54
SEMA6C-202ENST00000368912 SOS2Q07890 1332 aaPredicted RBP18.43■□□□□ 0.54
SEMA6C-202ENST00000368912 CHD2O14647 1828 aaKnown RBP18.43■□□□□ 0.54
SEMA6C-202ENST00000368912 KIF20BQ96Q89 1820 aa18.43■□□□□ 0.54
SEMA6C-202ENST00000368912 XRN1Q8IZH2 1706 aaKnown RBP18.43■□□□□ 0.54
SEMA6C-202ENST00000368912 CT47B1P0C2W7 299 aaPredicted RBP18.43■□□□□ 0.54
SEMA6C-202ENST00000368912 MCTP1Q6DN14 999 aa18.43■□□□□ 0.54
SEMA6C-202ENST00000368912 COPS6Q7L5N1 327 aa18.43■□□□□ 0.54
SEMA6C-202ENST00000368912 DDB1Q16531 1140 aa18.43■□□□□ 0.54
SEMA6C-202ENST00000368912 MAP3K2Q9Y2U5 619 aa18.43■□□□□ 0.54
SEMA6C-202ENST00000368912 NPHP1O15259 732 aa18.42■□□□□ 0.54
SEMA6C-202ENST00000368912 UBTFL1P0CB47 393 aaPredicted RBP18.42■□□□□ 0.54
SEMA6C-202ENST00000368912 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.42■□□□□ 0.54
SEMA6C-202ENST00000368912 WDR17Q8IZU2 1322 aa18.42■□□□□ 0.54
SEMA6C-202ENST00000368912 XAGE3Q8WTP9 111 aa18.42■□□□□ 0.54
SEMA6C-202ENST00000368912 ASAP1Q9ULH1 1129 aa18.42■□□□□ 0.54
SEMA6C-202ENST00000368912 IL1RAPL2Q9NP60 686 aa18.42■□□□□ 0.54
SEMA6C-202ENST00000368912 NOLC1Q14978 699 aaKnown RBP eCLIP18.41■□□□□ 0.54
SEMA6C-202ENST00000368912 DIAPH3Q9NSV4 1193 aa18.41■□□□□ 0.54
SEMA6C-202ENST00000368912 LRRFIP2Q9Y608 721 aaKnown RBP18.41■□□□□ 0.54
SEMA6C-202ENST00000368912 MYD88Q99836 296 aa18.41■□□□□ 0.54
SEMA6C-202ENST00000368912 SLC52A2Q9HAB3 445 aa18.41■□□□□ 0.54
SEMA6C-202ENST00000368912 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
SEMA6C-202ENST00000368912 GPTP24298 496 aa18.4■□□□□ 0.54
SEMA6C-202ENST00000368912 SRCIN1Q9C0H9 1055 aa18.4■□□□□ 0.54
SEMA6C-202ENST00000368912 DCAF5Q96JK2 942 aa18.4■□□□□ 0.54
SEMA6C-202ENST00000368912 SLFN14P0C7P3 912 aa18.39■□□□□ 0.54
SEMA6C-202ENST00000368912 SSFA2P28290 1259 aa18.39■□□□□ 0.53
SEMA6C-202ENST00000368912 RBM25P49756 843 aaKnown RBP18.39■□□□□ 0.53
SEMA6C-202ENST00000368912 KLHL40Q2TBA0 621 aa18.39■□□□□ 0.53
SEMA6C-202ENST00000368912 IQSEC2Q5JU85 1478 aa18.39■□□□□ 0.53
SEMA6C-202ENST00000368912 HSPA1LP34931 641 aa18.39■□□□□ 0.53
SEMA6C-202ENST00000368912 ZSCAN23Q3MJ62 389 aa18.39■□□□□ 0.53
SEMA6C-202ENST00000368912 C16orf71Q8IYS4 520 aaPredicted RBP18.39■□□□□ 0.53
SEMA6C-202ENST00000368912 ZNF526Q8TF50 670 aaPredicted RBP18.39■□□□□ 0.53
SEMA6C-202ENST00000368912 FMNL2Q96PY5 1086 aa18.39■□□□□ 0.53
SEMA6C-202ENST00000368912 MYCBPQ99417 103 aaPredicted RBP18.38■□□□□ 0.53
SEMA6C-202ENST00000368912 KNDC1Q76NI1 1749 aa18.38■□□□□ 0.53
SEMA6C-202ENST00000368912 NEXNQ0ZGT2 675 aa18.38■□□□□ 0.53
SEMA6C-202ENST00000368912 EFCC1Q9HA90 598 aa18.38■□□□□ 0.53
SEMA6C-202ENST00000368912 FEZ2Q9UHY8 353 aaPredicted RBP18.38■□□□□ 0.53
SEMA6C-202ENST00000368912 SHPRHQ149N8 1683 aa18.38■□□□□ 0.53
SEMA6C-202ENST00000368912 DBF4Q9UBU7 674 aaPredicted RBP18.38■□□□□ 0.53
SEMA6C-202ENST00000368912 SURF6O75683 361 aaKnown RBP18.37■□□□□ 0.53
SEMA6C-202ENST00000368912 BICDL1Q6ZP65 573 aa18.37■□□□□ 0.53
SEMA6C-202ENST00000368912 YY1AP1Q9H869 796 aa18.37■□□□□ 0.53
SEMA6C-202ENST00000368912 PIK3C2AO00443 1686 aa18.37■□□□□ 0.53
SEMA6C-202ENST00000368912 MAP4K4O95819 1239 aaPredicted RBP18.37■□□□□ 0.53
SEMA6C-202ENST00000368912 GIGYF1O75420 1035 aaPredicted RBP18.36■□□□□ 0.53
SEMA6C-202ENST00000368912 TERF2Q15554 542 aa18.36■□□□□ 0.53
SEMA6C-202ENST00000368912 DNAAF4Q8WXU2 420 aa18.36■□□□□ 0.53
SEMA6C-202ENST00000368912 HTATSF1O43719 755 aaKnown RBP18.36■□□□□ 0.53
SEMA6C-202ENST00000368912 USP21Q9UK80 565 aa18.36■□□□□ 0.53
SEMA6C-202ENST00000368912 GOLGA6L6A8MZA4 724 aa18.36■□□□□ 0.53
SEMA6C-202ENST00000368912 ZBTB7BO15156 539 aaPredicted RBP18.36■□□□□ 0.53
SEMA6C-202ENST00000368912 ZBTB40Q9NUA8 1239 aa18.36■□□□□ 0.53
SEMA6C-202ENST00000368912 RBM27Q9P2N5 1060 aaKnown RBP18.36■□□□□ 0.53
SEMA6C-202ENST00000368912 TBC1D2BQ9UPU7 963 aa18.36■□□□□ 0.53
SEMA6C-202ENST00000368912 RIOK3O14730 519 aaKnown RBP18.35■□□□□ 0.53
SEMA6C-202ENST00000368912 SRGAP3O43295 1099 aa18.35■□□□□ 0.53
SEMA6C-202ENST00000368912 DDX58O95786 925 aaKnown RBP18.35■□□□□ 0.53
SEMA6C-202ENST00000368912 GTF2F1P35269 517 aaKnown RBP eCLIP18.35■□□□□ 0.53
SEMA6C-202ENST00000368912 DNAJC10Q8IXB1 793 aa18.35■□□□□ 0.53
SEMA6C-202ENST00000368912 PDLIM2Q96JY6 352 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms