RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ARHGAP27Q6ZUM4 889 aa11.41□□□□□ -0.58
SNX27-201ENST00000368838 CCDC87Q9NVE4 849 aa11.41□□□□□ -0.58
SNX27-201ENST00000368838 DLEC1Q9Y238 1755 aa11.41□□□□□ -0.58
SNX27-201ENST00000368838 ANKRD31Q8N7Z5 1873 aa11.41□□□□□ -0.58
SNX27-201ENST00000368838 MRC1P22897 1456 aa11.4□□□□□ -0.58
SNX27-201ENST00000368838 RIOK3O14730 519 aaKnown RBP11.4□□□□□ -0.58
SNX27-201ENST00000368838 RNMTO43148 476 aaKnown RBP11.4□□□□□ -0.58
SNX27-201ENST00000368838 PRKAR2BP31323 418 aa11.4□□□□□ -0.58
SNX27-201ENST00000368838 AKAP4Q5JQC9 854 aa11.4□□□□□ -0.58
SNX27-201ENST00000368838 INTS5Q6P9B9 1019 aaKnown RBP11.4□□□□□ -0.58
SNX27-201ENST00000368838 CCDC146Q8IYE0 955 aa11.4□□□□□ -0.58
SNX27-201ENST00000368838 ZNF428Q96B54 188 aa11.4□□□□□ -0.58
SNX27-201ENST00000368838 SLC52A2Q9HAB3 445 aa11.4□□□□□ -0.58
SNX27-201ENST00000368838 TRIM35Q9UPQ4 493 aa11.4□□□□□ -0.58
SNX27-201ENST00000368838 USP42Q9H9J4 1324 aaKnown RBP11.4□□□□□ -0.58
SNX27-201ENST00000368838 DLG5Q8TDM6 1919 aa11.4□□□□□ -0.59
SNX27-201ENST00000368838 CHRNA5P30532 468 aa11.39□□□□□ -0.59
SNX27-201ENST00000368838 DCAF8Q5TAQ9 597 aa11.39□□□□□ -0.59
SNX27-201ENST00000368838 MYH16Q9H6N6 1097 aa11.39□□□□□ -0.59
SNX27-201ENST00000368838 GTF3C3Q9Y5Q9 886 aa11.39□□□□□ -0.59
SNX27-201ENST00000368838 TGFB2P61812 414 aa11.38□□□□□ -0.59
SNX27-201ENST00000368838 USPL1Q5W0Q7 1092 aa11.38□□□□□ -0.59
SNX27-201ENST00000368838 CDCA7LQ96GN5 454 aa11.38□□□□□ -0.59
SNX27-201ENST00000368838 NRXN2Q9P2S2 1712 aa11.38□□□□□ -0.59
SNX27-201ENST00000368838 KCNA3P22001 575 aa11.37□□□□□ -0.59
SNX27-201ENST00000368838 CANXP27824 592 aaKnown RBP11.37□□□□□ -0.59
SNX27-201ENST00000368838 GAS2L2Q8NHY3 880 aa11.37□□□□□ -0.59
SNX27-201ENST00000368838 BABAM1Q9NWV8 329 aa11.37□□□□□ -0.59
SNX27-201ENST00000368838 RCAN3Q9UKA8 241 aa11.37□□□□□ -0.59
SNX27-201ENST00000368838 ZBTB1Q9Y2K1 713 aa11.37□□□□□ -0.59
SNX27-201ENST00000368838 SOS1Q07889 1333 aaPredicted RBP11.37□□□□□ -0.59
SNX27-201ENST00000368838 COL11A2P13942 1736 aaPredicted RBP11.37□□□□□ -0.59
SNX27-201ENST00000368838 TIAM2Q8IVF5 1701 aa11.37□□□□□ -0.59
SNX27-201ENST00000368838 ZPR1O75312 459 aa11.36□□□□□ -0.59
SNX27-201ENST00000368838 ZNF853P0CG23 659 aa11.36□□□□□ -0.59
SNX27-201ENST00000368838 CYP19A1P11511 503 aaPredicted RBP11.36□□□□□ -0.59
SNX27-201ENST00000368838 RIPK4P57078 832 aa11.36□□□□□ -0.59
SNX27-201ENST00000368838 PHACTR3Q96KR7 559 aa11.36□□□□□ -0.59
SNX27-201ENST00000368838 SCN7AQ01118 1682 aa11.36□□□□□ -0.59
SNX27-201ENST00000368838 COL15A1P39059 1388 aa11.36□□□□□ -0.59
SNX27-201ENST00000368838 POLRMTO00411 1230 aaKnown RBP11.35□□□□□ -0.59
SNX27-201ENST00000368838 KIF3CO14782 793 aa11.35□□□□□ -0.59
SNX27-201ENST00000368838 NEFLP07196 543 aa11.35□□□□□ -0.59
SNX27-201ENST00000368838 BRPF1P55201 1214 aaPredicted RBP11.35□□□□□ -0.59
SNX27-201ENST00000368838 IFT57Q9NWB7 429 aa11.35□□□□□ -0.59
SNX27-201ENST00000368838 PIM2Q9P1W9 311 aa11.35□□□□□ -0.59
SNX27-201ENST00000368838 ZNF330Q9Y3S2 320 aaPredicted RBP11.35□□□□□ -0.59
SNX27-201ENST00000368838 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
SNX27-201ENST00000368838 STK25O00506 426 aa11.35□□□□□ -0.59
SNX27-201ENST00000368838 TM4SF1P30408 202 aa11.35□□□□□ -0.59
SNX27-201ENST00000368838 NFIXQ14938 502 aa11.35□□□□□ -0.59
SNX27-201ENST00000368838 DALRD3Q5D0E6 543 aaKnown RBP11.35□□□□□ -0.59
SNX27-201ENST00000368838 BICDL1Q6ZP65 573 aa11.35□□□□□ -0.59
SNX27-201ENST00000368838 BCL2L12Q9HB09 334 aa11.35□□□□□ -0.59
SNX27-201ENST00000368838 NMRK2Q9NPI5 230 aa11.35□□□□□ -0.59
SNX27-201ENST00000368838 BCORQ6W2J9 1755 aa11.34□□□□□ -0.59
SNX27-201ENST00000368838 DICER1Q9UPY3 1922 aaKnown RBP11.34□□□□□ -0.59
SNX27-201ENST00000368838 WDR90Q96KV7 1748 aa11.34□□□□□ -0.59
SNX27-201ENST00000368838 HSPA6P17066 643 aa11.34□□□□□ -0.59
SNX27-201ENST00000368838 GNAI1P63096 354 aa11.34□□□□□ -0.59
SNX27-201ENST00000368838 C9orf131Q5VYM1 1079 aa11.34□□□□□ -0.59
SNX27-201ENST00000368838 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
SNX27-201ENST00000368838 IL17REQ8NFR9 667 aa11.34□□□□□ -0.59
SNX27-201ENST00000368838 CARMIL3Q8ND23 1372 aa11.33□□□□□ -0.6
SNX27-201ENST00000368838 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
SNX27-201ENST00000368838 KCNQ3O43525 872 aa11.33□□□□□ -0.6
SNX27-201ENST00000368838 MNX1P50219 401 aaPredicted RBP11.33□□□□□ -0.6
SNX27-201ENST00000368838 TEFQ10587 303 aa11.33□□□□□ -0.6
SNX27-201ENST00000368838 TTC5Q8N0Z6 440 aa11.33□□□□□ -0.6
SNX27-201ENST00000368838 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
SNX27-201ENST00000368838 NARFQ9UHQ1 456 aa11.33□□□□□ -0.6
SNX27-201ENST00000368838 SLX4Q8IY92 1834 aa11.32□□□□□ -0.6
SNX27-201ENST00000368838 GNAT3A8MTJ3 354 aa11.32□□□□□ -0.6
SNX27-201ENST00000368838 SERPINB2P05120 415 aa11.32□□□□□ -0.6
SNX27-201ENST00000368838 PIP4K2AP48426 406 aaPredicted RBP11.32□□□□□ -0.6
SNX27-201ENST00000368838 RASSF7Q02833 373 aa11.32□□□□□ -0.6
SNX27-201ENST00000368838 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.32□□□□□ -0.6
SNX27-201ENST00000368838 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
SNX27-201ENST00000368838 RNF181Q9P0P0 153 aa11.32□□□□□ -0.6
SNX27-201ENST00000368838 FER1L6Q2WGJ9 1857 aa11.31□□□□□ -0.6
SNX27-201ENST00000368838 CHL1O00533 1208 aa11.31□□□□□ -0.6
SNX27-201ENST00000368838 RRP1P56182 461 aaKnown RBP11.31□□□□□ -0.6
SNX27-201ENST00000368838 AAMPQ13685 434 aa11.31□□□□□ -0.6
SNX27-201ENST00000368838 TBC1D2BQ9UPU7 963 aa11.31□□□□□ -0.6
SNX27-201ENST00000368838 RRP7AQ9Y3A4 280 aaKnown RBP11.31□□□□□ -0.6
SNX27-201ENST00000368838 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
SNX27-201ENST00000368838 CEMIPQ8WUJ3 1361 aa11.31□□□□□ -0.6
SNX27-201ENST00000368838 HEG1Q9ULI3 1381 aa11.31□□□□□ -0.6
SNX27-201ENST00000368838 A1BGP04217 495 aa11.3□□□□□ -0.6
SNX27-201ENST00000368838 PDE3AQ14432 1141 aa11.3□□□□□ -0.6
SNX27-201ENST00000368838 ALDH1L2Q3SY69 923 aa11.3□□□□□ -0.6
SNX27-201ENST00000368838 ZNF790Q6PG37 636 aa11.3□□□□□ -0.6
SNX27-201ENST00000368838 C2CD5Q86YS7 1000 aa11.3□□□□□ -0.6
SNX27-201ENST00000368838 FANCIQ9NVI1 1328 aa11.3□□□□□ -0.6
SNX27-201ENST00000368838 ARFGEF2Q9Y6D5 1785 aa11.29□□□□□ -0.6
SNX27-201ENST00000368838 NUP98P52948 1817 aa11.29□□□□□ -0.6
SNX27-201ENST00000368838 PRAMEF22A3QJZ6 481 aa11.29□□□□□ -0.6
SNX27-201ENST00000368838 LAMB4A4D0S4 1761 aa11.29□□□□□ -0.6
SNX27-201ENST00000368838 STARD3NLO95772 234 aa11.29□□□□□ -0.6
SNX27-201ENST00000368838 EIF5P55010 431 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms