RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 SH2B1Q9NRF2 756 aaPredicted RBP21.16■□□□□ 0.98
CHTOP-201ENST00000368686 GPS2Q13227 327 aa21.15■□□□□ 0.98
CHTOP-201ENST00000368686 ERCC6LQ2NKX8 1250 aa21.15■□□□□ 0.98
CHTOP-201ENST00000368686 TTC21BQ7Z4L5 1316 aa21.15■□□□□ 0.98
CHTOP-201ENST00000368686 HDGFL2Q7Z4V5 671 aaPredicted RBP21.15■□□□□ 0.98
CHTOP-201ENST00000368686 FILIP1Q7Z7B0 1213 aa21.15■□□□□ 0.98
CHTOP-201ENST00000368686 TTC21AQ8NDW8 1320 aa21.15■□□□□ 0.98
CHTOP-201ENST00000368686 POLKQ9UBT6 870 aa21.15■□□□□ 0.98
CHTOP-201ENST00000368686 CHMP3Q9Y3E7 222 aa21.15■□□□□ 0.98
CHTOP-201ENST00000368686 NPHP3Q7Z494 1330 aa21.15■□□□□ 0.98
CHTOP-201ENST00000368686 GOLGA6L4A6NEF3 574 aa21.15■□□□□ 0.98
CHTOP-201ENST00000368686 CCZ1BP86790 482 aa21.15■□□□□ 0.98
CHTOP-201ENST00000368686 CCZ1P86791 482 aaPredicted RBP21.15■□□□□ 0.98
CHTOP-201ENST00000368686 CCDC83Q8IWF9 413 aa21.15■□□□□ 0.98
CHTOP-201ENST00000368686 CLTCQ00610 1675 aaKnown RBP21.14■□□□□ 0.98
CHTOP-201ENST00000368686 GOLGA6L19H0YKK7 550 aa21.14■□□□□ 0.97
CHTOP-201ENST00000368686 ZRANB2O95218 330 aaKnown RBP eCLIP21.14■□□□□ 0.973e-14■■■■□ 24.3
CHTOP-201ENST00000368686 NEK11Q8NG66 645 aa21.14■□□□□ 0.97
CHTOP-201ENST00000368686 DNAJC25Q9H1X3 360 aa21.14■□□□□ 0.97
CHTOP-201ENST00000368686 IL25Q9H293 177 aa21.14■□□□□ 0.97
CHTOP-201ENST00000368686 GEMIN8Q9NWZ8 242 aaKnown RBP21.14■□□□□ 0.97
CHTOP-201ENST00000368686 CCDC69A6NI79 296 aa21.13■□□□□ 0.97
CHTOP-201ENST00000368686 UNC5CLQ8IV45 518 aa21.13■□□□□ 0.97
CHTOP-201ENST00000368686 SCAND2PQ9GZW5 306 aaPredicted RBP21.13■□□□□ 0.97
CHTOP-201ENST00000368686 CWC15Q9P013 229 aaKnown RBP21.13■□□□□ 0.97
CHTOP-201ENST00000368686 TMCO3Q6UWJ1 677 aa21.13■□□□□ 0.97
CHTOP-201ENST00000368686 SYT10Q6XYQ8 523 aa21.13■□□□□ 0.97
CHTOP-201ENST00000368686 KRBA2Q6ZNG9 492 aa21.13■□□□□ 0.97
CHTOP-201ENST00000368686 HYPKQ9NX55 129 aa21.13■□□□□ 0.97
CHTOP-201ENST00000368686 TRMT1Q9NXH9 659 aaKnown RBP21.13■□□□□ 0.97
CHTOP-201ENST00000368686 NPHP1O15259 732 aa21.12■□□□□ 0.97
CHTOP-201ENST00000368686 ATP8B1O43520 1251 aa21.12■□□□□ 0.97
CHTOP-201ENST00000368686 TUBB4AP04350 444 aa21.12■□□□□ 0.97
CHTOP-201ENST00000368686 GNAI2P04899 355 aa21.12■□□□□ 0.97
CHTOP-201ENST00000368686 NOP2P46087 812 aaKnown RBP21.12■□□□□ 0.97
CHTOP-201ENST00000368686 CCT4P50991 539 aaKnown RBP21.12■□□□□ 0.97
CHTOP-201ENST00000368686 SGSM2O43147 1006 aa21.12■□□□□ 0.97
CHTOP-201ENST00000368686 LARGE1O95461 756 aa21.12■□□□□ 0.97
CHTOP-201ENST00000368686 LARP6Q9BRS8 491 aaKnown RBP21.12■□□□□ 0.97
CHTOP-201ENST00000368686 PREX1Q8TCU6 1659 aa21.11■□□□□ 0.97
CHTOP-201ENST00000368686 SNW1Q13573 536 aaKnown RBP21.11■□□□□ 0.97
CHTOP-201ENST00000368686 ARID5BQ14865 1188 aa21.11■□□□□ 0.97
CHTOP-201ENST00000368686 CCDC93Q567U6 631 aa21.11■□□□□ 0.97
CHTOP-201ENST00000368686 ZFP91Q96JP5 570 aaPredicted RBP21.11■□□□□ 0.97
CHTOP-201ENST00000368686 MAP2P11137 1827 aaKnown RBP21.11■□□□□ 0.97
CHTOP-201ENST00000368686 ARHGAP29Q52LW3 1261 aa21.11■□□□□ 0.97
CHTOP-201ENST00000368686 LRRFIP2Q9Y608 721 aaKnown RBP21.11■□□□□ 0.97
CHTOP-201ENST00000368686 ADGRL3Q9HAR2 1447 aa21.1■□□□□ 0.97
CHTOP-201ENST00000368686 MYO1CO00159 1063 aa21.1■□□□□ 0.97
CHTOP-201ENST00000368686 CASQ1P31415 396 aa21.1■□□□□ 0.97
CHTOP-201ENST00000368686 VPS53Q5VIR6 699 aa21.1■□□□□ 0.97
CHTOP-201ENST00000368686 RASEFQ8IZ41 740 aa21.1■□□□□ 0.97
CHTOP-201ENST00000368686 NFATC2IPQ8NCF5 419 aa21.1■□□□□ 0.97
CHTOP-201ENST00000368686 LSG1Q9H089 658 aaKnown RBP21.1■□□□□ 0.97
CHTOP-201ENST00000368686 FAM83GA6ND36 823 aa21.09■□□□□ 0.97
CHTOP-201ENST00000368686 IL13P35225 146 aa21.09■□□□□ 0.97
CHTOP-201ENST00000368686 GSDMDP57764 484 aa21.09■□□□□ 0.97
CHTOP-201ENST00000368686 SAFB2Q14151 953 aaKnown RBP eCLIP21.09■□□□□ 0.97
CHTOP-201ENST00000368686 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.09■□□□□ 0.97
CHTOP-201ENST00000368686 DHX16O60231 1041 aaKnown RBP21.09■□□□□ 0.97
CHTOP-201ENST00000368686 CASTP20810 708 aaKnown RBP21.09■□□□□ 0.97
CHTOP-201ENST00000368686 IQCB1Q15051 598 aa21.09■□□□□ 0.97
CHTOP-201ENST00000368686 ZSCAN26Q16670 478 aa21.09■□□□□ 0.97
CHTOP-201ENST00000368686 UBXN6Q9BZV1 441 aa21.09■□□□□ 0.97
CHTOP-201ENST00000368686 POLR3GO15318 223 aaPredicted RBP21.08■□□□□ 0.97
CHTOP-201ENST00000368686 PDCP20941 246 aa21.08■□□□□ 0.97
CHTOP-201ENST00000368686 LARP1BQ659C4 914 aaKnown RBP21.08■□□□□ 0.97
CHTOP-201ENST00000368686 SPATA32Q96LK8 384 aa21.08■□□□□ 0.97
CHTOP-201ENST00000368686 CCDC191Q8NCU4 936 aa21.07■□□□□ 0.96
CHTOP-201ENST00000368686 SMARCE1Q969G3 411 aa21.07■□□□□ 0.96
CHTOP-201ENST00000368686 PDRG1Q9NUG6 133 aa21.07■□□□□ 0.96
CHTOP-201ENST00000368686 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
CHTOP-201ENST00000368686 C10orf67Q8IYJ2 551 aa21.06■□□□□ 0.96
CHTOP-201ENST00000368686 ORC3Q9UBD5 711 aaPredicted RBP21.06■□□□□ 0.96
CHTOP-201ENST00000368686 PSDA5PKW4 1024 aaPredicted RBP21.06■□□□□ 0.96
CHTOP-201ENST00000368686 TPM1P09493 284 aa21.06■□□□□ 0.96
CHTOP-201ENST00000368686 GTF2A1P52655 376 aaPredicted RBP21.06■□□□□ 0.96
CHTOP-201ENST00000368686 DCTN1Q14203 1278 aa21.06■□□□□ 0.96
CHTOP-201ENST00000368686 CDC37L1Q7L3B6 337 aa21.06■□□□□ 0.96
CHTOP-201ENST00000368686 GOLGA5Q8TBA6 731 aa21.06■□□□□ 0.96
CHTOP-201ENST00000368686 UBXN4Q92575 508 aa21.06■□□□□ 0.96
CHTOP-201ENST00000368686 USP16Q9Y5T5 823 aa21.06■□□□□ 0.96
CHTOP-201ENST00000368686 CHD2O14647 1828 aaKnown RBP21.05■□□□□ 0.96
CHTOP-201ENST00000368686 CHD1O14646 1710 aa21.05■□□□□ 0.96
CHTOP-201ENST00000368686 ERCC6L2Q5T890 1561 aa21.05■□□□□ 0.96
CHTOP-201ENST00000368686 NR1I2O75469 434 aa21.05■□□□□ 0.96
CHTOP-201ENST00000368686 LEO1Q8WVC0 666 aaPredicted RBP21.05■□□□□ 0.96
CHTOP-201ENST00000368686 TM6SF1Q9BZW5 370 aa21.05■□□□□ 0.96
CHTOP-201ENST00000368686 YTHDC2Q9H6S0 1430 aaKnown RBP21.05■□□□□ 0.96
CHTOP-201ENST00000368686 CHL1O00533 1208 aa21.04■□□□□ 0.96
CHTOP-201ENST00000368686 KCNJ6P48051 423 aa21.04■□□□□ 0.96
CHTOP-201ENST00000368686 ST5P78524 1137 aa21.04■□□□□ 0.96
CHTOP-201ENST00000368686 ATP8B2P98198 1209 aa21.04■□□□□ 0.96
CHTOP-201ENST00000368686 ICE2Q659A1 982 aa21.04■□□□□ 0.96
CHTOP-201ENST00000368686 SLC4A10Q6U841 1118 aa21.04■□□□□ 0.96
CHTOP-201ENST00000368686 GOLGA6L1Q8N7Z2 621 aa21.04■□□□□ 0.96
CHTOP-201ENST00000368686 AK7Q96M32 723 aa21.04■□□□□ 0.96
CHTOP-201ENST00000368686 SLC4A2P04920 1241 aa21.04■□□□□ 0.96
CHTOP-201ENST00000368686 ST3GAL1Q11201 340 aa21.04■□□□□ 0.96
CHTOP-201ENST00000368686 STX1AQ16623 288 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms