RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 HLFQ16534 295 aa29.13■■■□□ 2.25
ECHDC1-203ENST00000368291 PXDNLA1KZ92 1463 aa29.12■■■□□ 2.25
ECHDC1-203ENST00000368291 RGL2O15211 777 aa29.12■■■□□ 2.25
ECHDC1-203ENST00000368291 HDGFL1Q5TGJ6 251 aa29.12■■■□□ 2.25
ECHDC1-203ENST00000368291 ANKRD31Q8N7Z5 1873 aa29.11■■■□□ 2.25
ECHDC1-203ENST00000368291 ELL2O00472 640 aaPredicted RBP29.11■■■□□ 2.25
ECHDC1-203ENST00000368291 DDX21Q9NR30 783 aaKnown RBP eCLIP29.11■■■□□ 2.25
ECHDC1-203ENST00000368291 MAP3K15Q6ZN16 1313 aa29.11■■■□□ 2.25
ECHDC1-203ENST00000368291 TSPYL6Q8N831 410 aa29.1■■■□□ 2.25
ECHDC1-203ENST00000368291 SPINK5Q9NQ38 1064 aaPredicted RBP29.1■■■□□ 2.25
ECHDC1-203ENST00000368291 CHPF2Q9P2E5 772 aa29.1■■■□□ 2.25
ECHDC1-203ENST00000368291 ZNF521Q96K83 1311 aa29.1■■■□□ 2.25
ECHDC1-203ENST00000368291 ERVV-1B6SEH8 477 aa29.09■■■□□ 2.25
ECHDC1-203ENST00000368291 ZNF652Q9Y2D9 606 aa29.09■■■□□ 2.25
ECHDC1-203ENST00000368291 CARMIL3Q8ND23 1372 aa29.09■■■□□ 2.25
ECHDC1-203ENST00000368291 GOLGB1Q14789 3259 aaKnown RBP29.09■■■□□ 2.25
ECHDC1-203ENST00000368291 TGFB2P61812 414 aa29.08■■■□□ 2.25
ECHDC1-203ENST00000368291 FANCIQ9NVI1 1328 aa29.07■■■□□ 2.24
ECHDC1-203ENST00000368291 SETDB2Q96T68 719 aa29.07■■■□□ 2.24
ECHDC1-203ENST00000368291 KIF6Q6ZMV9 814 aa29.06■■■□□ 2.24
ECHDC1-203ENST00000368291 ZBTB3Q9H5J0 574 aa29.06■■■□□ 2.24
ECHDC1-203ENST00000368291 ANKRD36CQ5JPF3 1778 aa29.05■■■□□ 2.24
ECHDC1-203ENST00000368291 A0A0G2JLW4 131 aa29.05■■■□□ 2.24
ECHDC1-203ENST00000368291 COPS6Q7L5N1 327 aa29.05■■■□□ 2.24
ECHDC1-203ENST00000368291 DBF4Q9UBU7 674 aaPredicted RBP29.05■■■□□ 2.24
ECHDC1-203ENST00000368291 YBX3P16989 372 aaKnown RBP eCLIP29.04■■■□□ 2.24
ECHDC1-203ENST00000368291 XAGE3Q8WTP9 111 aa29.04■■■□□ 2.24
ECHDC1-203ENST00000368291 DLEC1Q9Y238 1755 aa29.04■■■□□ 2.24
ECHDC1-203ENST00000368291 UTRNP46939 3433 aa29.03■■■□□ 2.24
ECHDC1-203ENST00000368291 DCAF8L1A6NGE4 600 aa29.03■■■□□ 2.24
ECHDC1-203ENST00000368291 DPEP1P16444 411 aa29.03■■■□□ 2.24
ECHDC1-203ENST00000368291 KCNA3P22001 575 aa29.03■■■□□ 2.24
ECHDC1-203ENST00000368291 PRR5LQ6MZQ0 368 aa29.03■■■□□ 2.24
ECHDC1-203ENST00000368291 NIP7Q9Y221 180 aaKnown RBP eCLIP29.03■■■□□ 2.24
ECHDC1-203ENST00000368291 ATP10DQ9P241 1426 aa29.03■■■□□ 2.24
ECHDC1-203ENST00000368291 CHD4Q14839 1912 aa29.03■■■□□ 2.24
ECHDC1-203ENST00000368291 GPR162Q16538 588 aa29.02■■■□□ 2.24
ECHDC1-203ENST00000368291 GIGYF2Q6Y7W6 1299 aaKnown RBP29.02■■■□□ 2.24
ECHDC1-203ENST00000368291 AIMP1Q12904 312 aaKnown RBP29.01■■■□□ 2.24
ECHDC1-203ENST00000368291 PELP1Q8IZL8 1130 aaKnown RBP29.01■■■□□ 2.24
ECHDC1-203ENST00000368291 WWC3Q9ULE0 1092 aa29.01■■■□□ 2.24
ECHDC1-203ENST00000368291 CCDC24Q8N4L8 307 aa29.01■■■□□ 2.23
ECHDC1-203ENST00000368291 CACNA1FO60840 1977 aa29■■■□□ 2.23
ECHDC1-203ENST00000368291 TWISTNBQ3B726 338 aaPredicted RBP29■■■□□ 2.23
ECHDC1-203ENST00000368291 HYPKQ9NX55 129 aa29■■■□□ 2.23
ECHDC1-203ENST00000368291 ARFGEF2Q9Y6D5 1785 aa28.99■■■□□ 2.23
ECHDC1-203ENST00000368291 COL11A2P13942 1736 aaPredicted RBP28.99■■■□□ 2.23
ECHDC1-203ENST00000368291 CHRNA5P30532 468 aa28.99■■■□□ 2.23
ECHDC1-203ENST00000368291 ZNF34Q8IZ26 560 aa28.99■■■□□ 2.23
ECHDC1-203ENST00000368291 ARFGEF1Q9Y6D6 1849 aa28.98■■■□□ 2.23
ECHDC1-203ENST00000368291 UBN2Q6ZU65 1347 aa28.98■■■□□ 2.23
ECHDC1-203ENST00000368291 CCDC30Q5VVM6 783 aa28.98■■■□□ 2.23
ECHDC1-203ENST00000368291 CNBD1Q8NA66 436 aa28.98■■■□□ 2.23
ECHDC1-203ENST00000368291 EXOSC9Q06265 439 aaKnown RBP28.97■■■□□ 2.23
ECHDC1-203ENST00000368291 GOLGA2Q08379 1002 aa28.97■■■□□ 2.23
ECHDC1-203ENST00000368291 NBPF5PQ86XG9 351 aaPredicted RBP28.97■■■□□ 2.23
ECHDC1-203ENST00000368291 PHAXQ9H814 394 aaKnown RBP28.97■■■□□ 2.23
ECHDC1-203ENST00000368291 MYH16Q9H6N6 1097 aa28.96■■■□□ 2.23
ECHDC1-203ENST00000368291 GPTP24298 496 aa28.95■■■□□ 2.22
ECHDC1-203ENST00000368291 BRIP1Q9BX63 1249 aa28.95■■■□□ 2.22
ECHDC1-203ENST00000368291 FAM177BA6PVY3 158 aa28.94■■■□□ 2.22
ECHDC1-203ENST00000368291 VAMP4O75379 141 aa28.94■■■□□ 2.22
ECHDC1-203ENST00000368291 PLBD2Q8NHP8 589 aa28.94■■■□□ 2.22
ECHDC1-203ENST00000368291 TPTE2Q6XPS3 522 aa28.93■■■□□ 2.22
ECHDC1-203ENST00000368291 ANKRD13DQ6ZTN6 518 aa28.93■■■□□ 2.22
ECHDC1-203ENST00000368291 CHMP4AQ9BY43 222 aa28.93■■■□□ 2.22
ECHDC1-203ENST00000368291 TCERG1O14776 1098 aaKnown RBP28.92■■■□□ 2.22
ECHDC1-203ENST00000368291 ST5P78524 1137 aa28.92■■■□□ 2.22
ECHDC1-203ENST00000368291 SUSD4Q5VX71 490 aa28.92■■■□□ 2.22
ECHDC1-203ENST00000368291 IBTKQ9P2D0 1353 aaPredicted RBP28.92■■■□□ 2.22
ECHDC1-203ENST00000368291 PIM2Q9P1W9 311 aa28.91■■■□□ 2.22
ECHDC1-203ENST00000368291 TNRC6CQ9HCJ0 1690 aaKnown RBP28.91■■■□□ 2.22
ECHDC1-203ENST00000368291 CACNA1SQ13698 1873 aa28.9■■■□□ 2.22
ECHDC1-203ENST00000368291 NPHP1O15259 732 aa28.9■■■□□ 2.22
ECHDC1-203ENST00000368291 GRIN3BO60391 1043 aa28.9■■■□□ 2.22
ECHDC1-203ENST00000368291 TCIRG1Q13488 830 aa28.9■■■□□ 2.22
ECHDC1-203ENST00000368291 C2CD5Q86YS7 1000 aa28.9■■■□□ 2.22
ECHDC1-203ENST00000368291 BCS1LQ9Y276 419 aa28.9■■■□□ 2.22
ECHDC1-203ENST00000368291 PDE6BP35913 854 aa28.89■■■□□ 2.22
ECHDC1-203ENST00000368291 NTSR2O95665 410 aa28.88■■■□□ 2.21
ECHDC1-203ENST00000368291 SLFN5Q08AF3 891 aa28.88■■■□□ 2.21
ECHDC1-203ENST00000368291 HSP90AB3PQ58FF7 597 aa28.88■■■□□ 2.21
ECHDC1-203ENST00000368291 NUTM1Q86Y26 1132 aa28.88■■■□□ 2.21
ECHDC1-203ENST00000368291 ABCC12Q96J65 1359 aa28.88■■■□□ 2.21
ECHDC1-203ENST00000368291 H0YIN7 160 aa28.88■■■□□ 2.21
ECHDC1-203ENST00000368291 PARP10Q53GL7 1025 aa28.88■■■□□ 2.21
ECHDC1-203ENST00000368291 CDCA7LQ96GN5 454 aa28.88■■■□□ 2.21
ECHDC1-203ENST00000368291 NYXQ9GZU5 481 aa28.88■■■□□ 2.21
ECHDC1-203ENST00000368291 E9PSI1 815 aa28.87■■■□□ 2.21
ECHDC1-203ENST00000368291 NLRP10Q86W26 655 aa28.87■■■□□ 2.21
ECHDC1-203ENST00000368291 STK31Q9BXU1 1019 aa28.87■■■□□ 2.21
ECHDC1-203ENST00000368291 KLRG2A4D1S0 409 aaPredicted RBP28.86■■■□□ 2.21
ECHDC1-203ENST00000368291 ERFEQ4G0M1 354 aa28.86■■■□□ 2.21
ECHDC1-203ENST00000368291 G2E3Q7L622 706 aa28.86■■■□□ 2.21
ECHDC1-203ENST00000368291 PDZRN3Q9UPQ7 1066 aa28.86■■■□□ 2.21
ECHDC1-203ENST00000368291 SLC4A2P04920 1241 aa28.85■■■□□ 2.21
ECHDC1-203ENST00000368291 DALRD3Q5D0E6 543 aaKnown RBP28.85■■■□□ 2.21
ECHDC1-203ENST00000368291 SLX4Q8IY92 1834 aa28.85■■■□□ 2.21
ECHDC1-203ENST00000368291 ISCA1Q9BUE6 129 aa28.85■■■□□ 2.21
ECHDC1-203ENST00000368291 RIC1Q4ADV7 1423 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms