RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 NGEFQ8N5V2 710 aa19.16■□□□□ 0.66
SF3B5-201ENST00000367569 RNF181Q9P0P0 153 aa19.16■□□□□ 0.66
SF3B5-201ENST00000367569 DLEC1Q9Y238 1755 aa19.15■□□□□ 0.66
SF3B5-201ENST00000367569 C2CD5Q86YS7 1000 aa19.15■□□□□ 0.66
SF3B5-201ENST00000367569 TOMM70O94826 608 aa19.14■□□□□ 0.65
SF3B5-201ENST00000367569 MYL6BP14649 208 aa19.14■□□□□ 0.65
SF3B5-201ENST00000367569 ANXA1P04083 346 aa19.13■□□□□ 0.65
SF3B5-201ENST00000367569 EIF2S2P20042 333 aaKnown RBP19.13■□□□□ 0.65
SF3B5-201ENST00000367569 RASSF7Q02833 373 aa19.13■□□□□ 0.65
SF3B5-201ENST00000367569 CCDC24Q8N4L8 307 aa19.13■□□□□ 0.65
SF3B5-201ENST00000367569 TTLL6Q8N841 843 aa19.13■□□□□ 0.65
SF3B5-201ENST00000367569 MBIPQ9NS73 344 aa19.13■□□□□ 0.65
SF3B5-201ENST00000367569 NUP98P52948 1817 aa19.13■□□□□ 0.65
SF3B5-201ENST00000367569 ANKRD31Q8N7Z5 1873 aa19.13■□□□□ 0.65
SF3B5-201ENST00000367569 COL11A2P13942 1736 aaPredicted RBP19.12■□□□□ 0.65
SF3B5-201ENST00000367569 H0YIN7 160 aa19.12■□□□□ 0.65
SF3B5-201ENST00000367569 CHL1O00533 1208 aa19.12■□□□□ 0.65
SF3B5-201ENST00000367569 CAMTA2O94983 1202 aa19.12■□□□□ 0.65
SF3B5-201ENST00000367569 DZIP3Q86Y13 1208 aaKnown RBP19.12■□□□□ 0.65
SF3B5-201ENST00000367569 PRELPP51888 382 aa19.11■□□□□ 0.65
SF3B5-201ENST00000367569 PRR5LQ6MZQ0 368 aa19.11■□□□□ 0.65
SF3B5-201ENST00000367569 NPM2Q86SE8 214 aaKnown RBP19.11■□□□□ 0.65
SF3B5-201ENST00000367569 CACNA1SQ13698 1873 aa19.11■□□□□ 0.65
SF3B5-201ENST00000367569 PROSER3Q2NL68 480 aa19.1■□□□□ 0.65
SF3B5-201ENST00000367569 TSR2Q969E8 191 aaKnown RBP19.1■□□□□ 0.65
SF3B5-201ENST00000367569 ANKRD36CQ5JPF3 1778 aa19.09■□□□□ 0.65
SF3B5-201ENST00000367569 KDM2BQ8NHM5 1336 aa19.09■□□□□ 0.65
SF3B5-201ENST00000367569 BRIP1Q9BX63 1249 aa19.09■□□□□ 0.65
SF3B5-201ENST00000367569 RRAGCQ9HB90 399 aa19.09■□□□□ 0.65
SF3B5-201ENST00000367569 CCDC88AQ3V6T2 1871 aa19.08■□□□□ 0.65
SF3B5-201ENST00000367569 ZNF622Q969S3 477 aaKnown RBP eCLIP19.08■□□□□ 0.64
SF3B5-201ENST00000367569 CFAP44Q96MT7 982 aa19.08■□□□□ 0.64
SF3B5-201ENST00000367569 SETDB2Q96T68 719 aa19.08■□□□□ 0.64
SF3B5-201ENST00000367569 NFKBIEO00221 500 aa19.07■□□□□ 0.64
SF3B5-201ENST00000367569 ELL2O00472 640 aaPredicted RBP19.07■□□□□ 0.64
SF3B5-201ENST00000367569 LMNB1P20700 586 aa19.07■□□□□ 0.64
SF3B5-201ENST00000367569 PDE6BP35913 854 aa19.07■□□□□ 0.64
SF3B5-201ENST00000367569 TTLL7Q6ZT98 887 aa19.07■□□□□ 0.64
SF3B5-201ENST00000367569 WWC1Q8IX03 1113 aa19.07■□□□□ 0.64
SF3B5-201ENST00000367569 RBM46Q8TBY0 533 aaKnown RBP19.07■□□□□ 0.64
SF3B5-201ENST00000367569 IFT57Q9NWB7 429 aa19.07■□□□□ 0.64
SF3B5-201ENST00000367569 BABAM1Q9NWV8 329 aa19.07■□□□□ 0.64
SF3B5-201ENST00000367569 TNRC6CQ9HCJ0 1690 aaKnown RBP19.06■□□□□ 0.64
SF3B5-201ENST00000367569 ZNF853P0CG23 659 aa19.06■□□□□ 0.64
SF3B5-201ENST00000367569 GNAI1P63096 354 aa19.06■□□□□ 0.64
SF3B5-201ENST00000367569 DIEXFQ68CQ4 756 aaKnown RBP19.06■□□□□ 0.64
SF3B5-201ENST00000367569 ZBTB3Q9H5J0 574 aa19.06■□□□□ 0.64
SF3B5-201ENST00000367569 ARFGEF2Q9Y6D5 1785 aa19.06■□□□□ 0.64
SF3B5-201ENST00000367569 FAM177BA6PVY3 158 aa19.05■□□□□ 0.64
SF3B5-201ENST00000367569 APLP1P51693 650 aa19.05■□□□□ 0.64
SF3B5-201ENST00000367569 HLFQ16534 295 aa19.05■□□□□ 0.64
SF3B5-201ENST00000367569 C16orf71Q8IYS4 520 aaPredicted RBP19.05■□□□□ 0.64
SF3B5-201ENST00000367569 CNBD1Q8NA66 436 aa19.05■□□□□ 0.64
SF3B5-201ENST00000367569 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
SF3B5-201ENST00000367569 PDZRN3Q9UPQ7 1066 aa19.05■□□□□ 0.64
SF3B5-201ENST00000367569 C21orf2O43822 256 aa19.04■□□□□ 0.64
SF3B5-201ENST00000367569 CALD1Q05682 793 aaKnown RBP19.04■□□□□ 0.64
SF3B5-201ENST00000367569 PDIA6Q15084 440 aa19.04■□□□□ 0.64
SF3B5-201ENST00000367569 HDGFL1Q5TGJ6 251 aa19.04■□□□□ 0.64
SF3B5-201ENST00000367569 DUSP27Q5VZP5 1158 aa19.04■□□□□ 0.64
SF3B5-201ENST00000367569 CHPF2Q9P2E5 772 aa19.04■□□□□ 0.64
SF3B5-201ENST00000367569 ZC3H4Q9UPT8 1303 aaKnown RBP19.03■□□□□ 0.64
SF3B5-201ENST00000367569 NPHP1O15259 732 aa19.03■□□□□ 0.64
SF3B5-201ENST00000367569 CLEC4GQ6UXB4 293 aa19.03■□□□□ 0.64
SF3B5-201ENST00000367569 MIER1Q8N108 512 aa19.03■□□□□ 0.64
SF3B5-201ENST00000367569 ST5P78524 1137 aa19.02■□□□□ 0.64
SF3B5-201ENST00000367569 AIMP1Q12904 312 aaKnown RBP19.02■□□□□ 0.64
SF3B5-201ENST00000367569 KIF6Q6ZMV9 814 aa19.02■□□□□ 0.64
SF3B5-201ENST00000367569 DNAJC5GQ8N7S2 189 aa19.02■□□□□ 0.64
SF3B5-201ENST00000367569 C8orf58Q8NAV2 365 aa19.02■□□□□ 0.64
SF3B5-201ENST00000367569 ZNF428Q96B54 188 aa19.02■□□□□ 0.64
SF3B5-201ENST00000367569 FER1L6Q2WGJ9 1857 aa19.02■□□□□ 0.64
SF3B5-201ENST00000367569 TIAM2Q8IVF5 1701 aa19.02■□□□□ 0.63
SF3B5-201ENST00000367569 SLX4Q8IY92 1834 aa19.02■□□□□ 0.63
SF3B5-201ENST00000367569 GLTPD2A6NH11 291 aa19.01■□□□□ 0.63
SF3B5-201ENST00000367569 SRGNP10124 158 aa19.01■□□□□ 0.63
SF3B5-201ENST00000367569 CCDC27Q2M243 656 aa19.01■□□□□ 0.63
SF3B5-201ENST00000367569 LRP10Q7Z4F1 713 aa19.01■□□□□ 0.63
SF3B5-201ENST00000367569 NBPF5PQ86XG9 351 aaPredicted RBP19.01■□□□□ 0.63
SF3B5-201ENST00000367569 TSPYL6Q8N831 410 aa19.01■□□□□ 0.63
SF3B5-201ENST00000367569 ERBB4Q15303 1308 aa19■□□□□ 0.63
SF3B5-201ENST00000367569 MAP3K15Q6ZN16 1313 aa19■□□□□ 0.63
SF3B5-201ENST00000367569 FANCIQ9NVI1 1328 aa19■□□□□ 0.63
SF3B5-201ENST00000367569 TCERG1O14776 1098 aaKnown RBP19■□□□□ 0.63
SF3B5-201ENST00000367569 GPTP24298 496 aa19■□□□□ 0.63
SF3B5-201ENST00000367569 FSTL1Q12841 308 aa19■□□□□ 0.63
SF3B5-201ENST00000367569 STYK1Q6J9G0 422 aa19■□□□□ 0.63
SF3B5-201ENST00000367569 XAGE3Q8WTP9 111 aa19■□□□□ 0.63
SF3B5-201ENST00000367569 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
SF3B5-201ENST00000367569 NIP7Q9Y221 180 aaKnown RBP eCLIP19■□□□□ 0.63
SF3B5-201ENST00000367569 ZNF652Q9Y2D9 606 aa19■□□□□ 0.63
SF3B5-201ENST00000367569 HTRA3P83110 453 aa18.99■□□□□ 0.63
SF3B5-201ENST00000367569 CNKSR1Q969H4 720 aa18.99■□□□□ 0.63
SF3B5-201ENST00000367569 MASTLQ96GX5 879 aa18.99■□□□□ 0.63
SF3B5-201ENST00000367569 WDR90Q96KV7 1748 aa18.99■□□□□ 0.63
SF3B5-201ENST00000367569 CCER2I3L3R5 266 aa18.98■□□□□ 0.63
SF3B5-201ENST00000367569 PRPF40BQ6NWY9 871 aaKnown RBP18.98■□□□□ 0.63
SF3B5-201ENST00000367569 DICER1Q9UPY3 1922 aaKnown RBP18.98■□□□□ 0.63
SF3B5-201ENST00000367569 RGL2O15211 777 aa18.97■□□□□ 0.63
SF3B5-201ENST00000367569 VEGFAP15692 232 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms